RNA–Protein interactions for RNA: ENST00000555617.5

ABCD4-222, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-222ENST00000555617 CHD2O14647 1828 aaKnown RBP19.57■□□□□ 0.72
ABCD4-222ENST00000555617 KIAA1107Q9UPP5 1409 aa19.57■□□□□ 0.72
ABCD4-222ENST00000555617 TRPC5Q9UL62 973 aaPredicted RBP19.56■□□□□ 0.72
ABCD4-222ENST00000555617 PIK3C2BO00750 1634 aa19.55■□□□□ 0.72
ABCD4-222ENST00000555617 ASXL1Q8IXJ9 1541 aa19.55■□□□□ 0.72
ABCD4-222ENST00000555617 RTEL1-TNFRSF6BF6WH68 1400 aa19.53■□□□□ 0.72
ABCD4-222ENST00000555617 UTRNP46939 3433 aa19.53■□□□□ 0.72
ABCD4-222ENST00000555617 TMEM2Q9UHN6 1383 aa19.53■□□□□ 0.72
ABCD4-222ENST00000555617 CAMSAP2Q08AD1 1489 aa19.52■□□□□ 0.72
ABCD4-222ENST00000555617 UNC13BO14795 1591 aa19.52■□□□□ 0.71
ABCD4-222ENST00000555617 R3HDM1Q15032 1099 aaKnown RBP19.51■□□□□ 0.71
ABCD4-222ENST00000555617 EID1Q9Y6B2 187 aa19.51■□□□□ 0.71
ABCD4-222ENST00000555617 DDX17Q92841 729 aaKnown RBP19.5■□□□□ 0.71
ABCD4-222ENST00000555617 MROH1Q8NDA8 1641 aa19.5■□□□□ 0.71
ABCD4-222ENST00000555617 CEP152O94986 1710 aa19.49■□□□□ 0.71
ABCD4-222ENST00000555617 FNBP4Q8N3X1 1017 aaPredicted RBP19.47■□□□□ 0.71
ABCD4-222ENST00000555617 GLI3P10071 1580 aa19.47■□□□□ 0.71
ABCD4-222ENST00000555617 FMN1Q68DA7 1419 aa19.46■□□□□ 0.71
ABCD4-222ENST00000555617 PLEKHH2Q8IVE3 1493 aa19.46■□□□□ 0.71
ABCD4-222ENST00000555617 MBD5Q9P267 1494 aa19.45■□□□□ 0.7
ABCD4-222ENST00000555617 SPHKAPQ2M3C7 1700 aa19.45■□□□□ 0.7
ABCD4-222ENST00000555617 SLC34A2O95436 690 aa19.44■□□□□ 0.7
ABCD4-222ENST00000555617 ARHGAP35Q9NRY4 1499 aa19.42■□□□□ 0.7
ABCD4-222ENST00000555617 ZNF644Q9H582 1327 aaPredicted RBP19.42■□□□□ 0.7
ABCD4-222ENST00000555617 CADPS2Q86UW7 1296 aa19.41■□□□□ 0.7
ABCD4-222ENST00000555617 LRRC59Q96AG4 307 aaKnown RBP19.41■□□□□ 0.7
ABCD4-222ENST00000555617 EHMT2Q96KQ7 1210 aa19.41■□□□□ 0.7
ABCD4-222ENST00000555617 SF3B2Q13435 895 aaKnown RBP19.4■□□□□ 0.7
ABCD4-222ENST00000555617 NCOA3Q9Y6Q9 1424 aa19.39■□□□□ 0.69
ABCD4-222ENST00000555617 EFCAB6Q5THR3 1501 aa19.38■□□□□ 0.69
ABCD4-222ENST00000555617 C14orf37Q86TY3 774 aa19.38■□□□□ 0.69
ABCD4-222ENST00000555617 GJD4Q96KN9 370 aaPredicted RBP19.37■□□□□ 0.69
ABCD4-222ENST00000555617 ATF3P18847 181 aa19.36■□□□□ 0.69
ABCD4-222ENST00000555617 CSRNP3Q8WYN3 585 aa19.36■□□□□ 0.69
ABCD4-222ENST00000555617 C19orf44Q9H6X5 657 aa19.35■□□□□ 0.69
ABCD4-222ENST00000555617 RALGAPBQ86X10 1494 aa19.35■□□□□ 0.69
ABCD4-222ENST00000555617 MST1RQ04912 1400 aa19.34■□□□□ 0.69
ABCD4-222ENST00000555617 MARF1Q9Y4F3 1742 aaKnown RBP19.34■□□□□ 0.69
ABCD4-222ENST00000555617 CFDP1Q9UEE9 299 aaPredicted RBP19.34■□□□□ 0.69
ABCD4-222ENST00000555617 PTCH1Q13635 1447 aa19.34■□□□□ 0.69
ABCD4-222ENST00000555617 EN1Q05925 392 aaPredicted RBP19.33■□□□□ 0.68
ABCD4-222ENST00000555617 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.33■□□□□ 0.68
ABCD4-222ENST00000555617 CHD4Q14839 1912 aa19.33■□□□□ 0.68
ABCD4-222ENST00000555617 BAG6P46379 1132 aa19.3■□□□□ 0.68
ABCD4-222ENST00000555617 COL22A1Q8NFW1 1626 aaPredicted RBP19.28■□□□□ 0.68
ABCD4-222ENST00000555617 TNS1Q9HBL0 1735 aaKnown RBP19.27■□□□□ 0.68
ABCD4-222ENST00000555617 NINLQ9Y2I6 1382 aa19.27■□□□□ 0.68
ABCD4-222ENST00000555617 CCDC18Q5T9S5 1454 aa19.25■□□□□ 0.67
ABCD4-222ENST00000555617 RGPD1P0DJD0 1748 aa19.25■□□□□ 0.67
ABCD4-222ENST00000555617 LAMC1P11047 1609 aa19.25■□□□□ 0.67
ABCD4-222ENST00000555617 MYO5BQ9ULV0 1848 aa19.23■□□□□ 0.67
ABCD4-222ENST00000555617 MYOM2P54296 1465 aa19.23■□□□□ 0.67
ABCD4-222ENST00000555617 CAPN15O75808 1086 aa19.23■□□□□ 0.67
ABCD4-222ENST00000555617 SEPT12Q8IYM1 358 aa19.23■□□□□ 0.67
ABCD4-222ENST00000555617 BCANQ96GW7 911 aa19.23■□□□□ 0.67
ABCD4-222ENST00000555617 DCAF8L1A6NGE4 600 aa19.22■□□□□ 0.67
ABCD4-222ENST00000555617 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.22■□□□□ 0.673e-10■■□□□ 14.5
ABCD4-222ENST00000555617 DCCP43146 1447 aa19.22■□□□□ 0.67
ABCD4-222ENST00000555617 STAG3Q9UJ98 1225 aa19.21■□□□□ 0.67
ABCD4-222ENST00000555617 ADGRB3O60242 1522 aa19.2■□□□□ 0.66
ABCD4-222ENST00000555617 IDI1Q13907 227 aa19.2■□□□□ 0.66
ABCD4-222ENST00000555617 CCNB3Q8WWL7 1395 aa19.19■□□□□ 0.66
ABCD4-222ENST00000555617 EZH2Q15910 746 aaKnown RBP19.19■□□□□ 0.66
ABCD4-222ENST00000555617 CCDC141Q6ZP82 1450 aa19.19■□□□□ 0.66
ABCD4-222ENST00000555617 ZFYVE9O95405 1425 aa19.18■□□□□ 0.66
ABCD4-222ENST00000555617 ARHGAP31Q2M1Z3 1444 aa19.18■□□□□ 0.66
ABCD4-222ENST00000555617 PLEKHG1Q9ULL1 1385 aa19.18■□□□□ 0.66
ABCD4-222ENST00000555617 GIGYF1O75420 1035 aaPredicted RBP19.17■□□□□ 0.66
ABCD4-222ENST00000555617 EIF2AK4Q9P2K8 1649 aaKnown RBP19.17■□□□□ 0.66
ABCD4-222ENST00000555617 ADAMTS13Q76LX8 1427 aa19.17■□□□□ 0.66
ABCD4-222ENST00000555617 PTPRUQ92729 1446 aa19.17■□□□□ 0.66
ABCD4-222ENST00000555617 KRT27Q7Z3Y8 459 aa19.16■□□□□ 0.66
ABCD4-222ENST00000555617 PPP1R1BQ9UD71 204 aaPredicted RBP19.16■□□□□ 0.66
ABCD4-222ENST00000555617 DISP2A7MBM2 1401 aa19.16■□□□□ 0.66
ABCD4-222ENST00000555617 TRPM2O94759 1503 aa19.15■□□□□ 0.66
ABCD4-222ENST00000555617 NUP188Q5SRE5 1749 aa19.15■□□□□ 0.66
ABCD4-222ENST00000555617 CASKIN1Q8WXD9 1431 aa19.15■□□□□ 0.66
ABCD4-222ENST00000555617 SLIT2O94813 1529 aa19.14■□□□□ 0.65
ABCD4-222ENST00000555617 SOS2Q07890 1332 aaPredicted RBP19.13■□□□□ 0.65
ABCD4-222ENST00000555617 RREB1Q92766 1687 aa19.13■□□□□ 0.65
ABCD4-222ENST00000555617 NRKQ7Z2Y5 1582 aa19.11■□□□□ 0.65
ABCD4-222ENST00000555617 FAM182BQ5T319 152 aa19.1■□□□□ 0.65
ABCD4-222ENST00000555617 UNC5CLQ8IV45 518 aa19.1■□□□□ 0.65
ABCD4-222ENST00000555617 TBX22Q9Y458 520 aa19.1■□□□□ 0.65
ABCD4-222ENST00000555617 NALCNQ8IZF0 1738 aa19.1■□□□□ 0.65
ABCD4-222ENST00000555617 SHANK3Q9BYB0 1731 aa19.09■□□□□ 0.65
ABCD4-222ENST00000555617 MYOM1P52179 1685 aa19.09■□□□□ 0.65
ABCD4-222ENST00000555617 PPP1R15AO75807 674 aaPredicted RBP19.08■□□□□ 0.64
ABCD4-222ENST00000555617 CAMKK2Q96RR4 588 aa19.08■□□□□ 0.64
ABCD4-222ENST00000555617 SPON1Q9HCB6 807 aa19.08■□□□□ 0.64
ABCD4-222ENST00000555617 XRN1Q8IZH2 1706 aaKnown RBP19.08■□□□□ 0.64
ABCD4-222ENST00000555617 KCNQ2O43526 872 aa19.06■□□□□ 0.64
ABCD4-222ENST00000555617 ONECUT3O60422 494 aaPredicted RBP19.06■□□□□ 0.64
ABCD4-222ENST00000555617 EHBP1L1Q8N3D4 1523 aa19.05■□□□□ 0.64
ABCD4-222ENST00000555617 C1orf167Q5SNV9 1468 aa19.04■□□□□ 0.64
ABCD4-222ENST00000555617 RIMS2Q9UQ26 1411 aa19.04■□□□□ 0.64
ABCD4-222ENST00000555617 AMOTL2Q9Y2J4 779 aa19.03■□□□□ 0.64
ABCD4-222ENST00000555617 GCC2Q8IWJ2 1684 aa19.03■□□□□ 0.64
ABCD4-222ENST00000555617 MTUS2Q5JR59 1369 aa19.03■□□□□ 0.64
ABCD4-222ENST00000555617 COL13A1Q5TAT6 717 aaPredicted RBP19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 178.7 ms