RNA–Protein interactions for RNA: ENST00000555075.5

ACTN1-214, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 828 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-214ENST00000555075 SENP3Q9H4L4 574 aaPredicted RBP17.55■□□□□ 0.4
ACTN1-214ENST00000555075 SCAF11Q99590 1463 aaKnown RBP17.55■□□□□ 0.4
ACTN1-214ENST00000555075 RIMS2Q9UQ26 1411 aa17.55■□□□□ 0.4
ACTN1-214ENST00000555075 KDM5AP29375 1690 aaKnown RBP17.55■□□□□ 0.4
ACTN1-214ENST00000555075 NUTM2DQ5VT03 806 aaPredicted RBP17.54■□□□□ 0.4
ACTN1-214ENST00000555075 NPHP4O75161 1426 aaPredicted RBP17.54■□□□□ 0.4
ACTN1-214ENST00000555075 CLTCL1P53675 1640 aa17.54■□□□□ 0.4
ACTN1-214ENST00000555075 SLIT1O75093 1534 aa17.52■□□□□ 0.4
ACTN1-214ENST00000555075 TMEM131LA2VDJ0 1609 aa17.52■□□□□ 0.4
ACTN1-214ENST00000555075 LTKP29376 864 aa17.52■□□□□ 0.4
ACTN1-214ENST00000555075 IQGAP1P46940 1657 aa17.52■□□□□ 0.39
ACTN1-214ENST00000555075 KIF1BO60333 1816 aa17.51■□□□□ 0.39
ACTN1-214ENST00000555075 MED14O60244 1454 aa17.51■□□□□ 0.39
ACTN1-214ENST00000555075 ARHGAP23Q9P227 1491 aa17.5■□□□□ 0.39
ACTN1-214ENST00000555075 RPGRIP1LQ68CZ1 1315 aa17.5■□□□□ 0.39
ACTN1-214ENST00000555075 VGFO15240 615 aaPredicted RBP17.5■□□□□ 0.39
ACTN1-214ENST00000555075 CPS1P31327 1500 aa17.49■□□□□ 0.39
ACTN1-214ENST00000555075 ANKRD30BQ9BXX2 1392 aa17.49■□□□□ 0.39
ACTN1-214ENST00000555075 UBAP1LF5GYI3 381 aa17.48■□□□□ 0.39
ACTN1-214ENST00000555075 NEUROD1Q13562 356 aa17.46■□□□□ 0.39
ACTN1-214ENST00000555075 SLC26A8Q96RN1 970 aa17.46■□□□□ 0.39
ACTN1-214ENST00000555075 DHX57Q6P158 1386 aaKnown RBP17.45■□□□□ 0.38
ACTN1-214ENST00000555075 PLEKHG1Q9ULL1 1385 aa17.45■□□□□ 0.38
ACTN1-214ENST00000555075 ZFYVE9O95405 1425 aa17.45■□□□□ 0.38
ACTN1-214ENST00000555075 MYO5BQ9ULV0 1848 aa17.44■□□□□ 0.38
ACTN1-214ENST00000555075 CCER1Q8TC90 406 aaPredicted RBP17.42■□□□□ 0.38
ACTN1-214ENST00000555075 KDM2AQ9Y2K7 1162 aa17.42■□□□□ 0.38
ACTN1-214ENST00000555075 DCAF11Q8TEB1 546 aa17.41■□□□□ 0.38
ACTN1-214ENST00000555075 SCAF1Q9H7N4 1312 aaKnown RBP17.4■□□□□ 0.38
ACTN1-214ENST00000555075 SPATA31E1Q6ZUB1 1445 aa17.39■□□□□ 0.38
ACTN1-214ENST00000555075 STRCP1A6NGW2 1772 aa17.39■□□□□ 0.37
ACTN1-214ENST00000555075 NEXMIFQ5QGS0 1516 aa17.39■□□□□ 0.37
ACTN1-214ENST00000555075 TBX22Q9Y458 520 aa17.39■□□□□ 0.37
ACTN1-214ENST00000555075 SIN3AQ96ST3 1273 aa17.38■□□□□ 0.37
ACTN1-214ENST00000555075 PIP4K2BP78356 416 aa17.37■□□□□ 0.37
ACTN1-214ENST00000555075 DISP3Q9P2K9 1392 aa17.37■□□□□ 0.37
ACTN1-214ENST00000555075 STAC3Q96MF2 364 aa17.36■□□□□ 0.37
ACTN1-214ENST00000555075 LRRC7Q96NW7 1537 aa17.36■□□□□ 0.37
ACTN1-214ENST00000555075 TOM1O60784 492 aa17.35■□□□□ 0.37
ACTN1-214ENST00000555075 KCNA6P17658 529 aa17.35■□□□□ 0.37
ACTN1-214ENST00000555075 ADGRF5Q8IZF2 1346 aa17.34■□□□□ 0.37
ACTN1-214ENST00000555075 TONSLQ96HA7 1378 aa17.34■□□□□ 0.37
ACTN1-214ENST00000555075 DIP2AQ14689 1571 aa17.33■□□□□ 0.37
ACTN1-214ENST00000555075 C14orf37Q86TY3 774 aa17.33■□□□□ 0.36
ACTN1-214ENST00000555075 PROSER2Q86WR7 435 aaPredicted RBP17.33■□□□□ 0.36
ACTN1-214ENST00000555075 PPLO60437 1756 aa17.32■□□□□ 0.36
ACTN1-214ENST00000555075 ALKQ9UM73 1620 aa17.31■□□□□ 0.36
ACTN1-214ENST00000555075 ADAMTS13Q76LX8 1427 aa17.3■□□□□ 0.36
ACTN1-214ENST00000555075 PIK3R4Q99570 1358 aa17.3■□□□□ 0.36
ACTN1-214ENST00000555075 AMOTL2Q9Y2J4 779 aa17.3■□□□□ 0.36
ACTN1-214ENST00000555075 SETBP1Q9Y6X0 1596 aa17.3■□□□□ 0.36
ACTN1-214ENST00000555075 HSPA1LP34931 641 aa17.29■□□□□ 0.36
ACTN1-214ENST00000555075 MYOM2P54296 1465 aa17.29■□□□□ 0.36
ACTN1-214ENST00000555075 CLSPNQ9HAW4 1339 aa17.28■□□□□ 0.36
ACTN1-214ENST00000555075 L3MBTL2Q969R5 705 aa17.28■□□□□ 0.36
ACTN1-214ENST00000555075 STK26Q9P289 416 aa17.27■□□□□ 0.36
ACTN1-214ENST00000555075 CFAP70Q5T0N1 1121 aa17.26■□□□□ 0.35
ACTN1-214ENST00000555075 METP08581 1390 aa17.26■□□□□ 0.35
ACTN1-214ENST00000555075 PIK3C2GO75747 1445 aa17.25■□□□□ 0.35
ACTN1-214ENST00000555075 C14orf93Q9H972 538 aaKnown RBP17.25■□□□□ 0.35
ACTN1-214ENST00000555075 XIRP1Q702N8 1843 aaKnown RBP17.25■□□□□ 0.35
ACTN1-214ENST00000555075 IFT172Q9UG01 1749 aa17.24■□□□□ 0.35
ACTN1-214ENST00000555075 TMEM132EQ6IEE7 984 aa17.24■□□□□ 0.35
ACTN1-214ENST00000555075 NKTRP30414 1462 aaKnown RBP17.24■□□□□ 0.35
ACTN1-214ENST00000555075 NWD1Q149M9 1564 aa17.23■□□□□ 0.35
ACTN1-214ENST00000555075 NRXN3Q9Y4C0 1643 aa17.22■□□□□ 0.35
ACTN1-214ENST00000555075 ILDR2Q71H61 639 aa17.22■□□□□ 0.35
ACTN1-214ENST00000555075 RBM33Q96EV2 1170 aaKnown RBP17.22■□□□□ 0.35
ACTN1-214ENST00000555075 TMEM94Q12767 1356 aa17.22■□□□□ 0.35
ACTN1-214ENST00000555075 MSH6P52701 1360 aa17.21■□□□□ 0.35
ACTN1-214ENST00000555075 POGKQ9P215 609 aa17.2■□□□□ 0.34
ACTN1-214ENST00000555075 LAMC1P11047 1609 aa17.2■□□□□ 0.34
ACTN1-214ENST00000555075 NRXN1Q9ULB1 1477 aa17.19■□□□□ 0.34
ACTN1-214ENST00000555075 CHD2O14647 1828 aaKnown RBP17.19■□□□□ 0.34
ACTN1-214ENST00000555075 MED1Q15648 1581 aaPredicted RBP17.19■□□□□ 0.34
ACTN1-214ENST00000555075 ATF3P18847 181 aa17.18■□□□□ 0.34
ACTN1-214ENST00000555075 PTPRUQ92729 1446 aa17.18■□□□□ 0.34
ACTN1-214ENST00000555075 LRPPRCP42704 1394 aaKnown RBP17.17■□□□□ 0.34
ACTN1-214ENST00000555075 PRAG1Q86YV5 1406 aa17.17■□□□□ 0.34
ACTN1-214ENST00000555075 YTHDC2Q9H6S0 1430 aaKnown RBP17.17■□□□□ 0.34
ACTN1-214ENST00000555075 TIMELESSQ9UNS1 1208 aa17.16■□□□□ 0.34
ACTN1-214ENST00000555075 TRAK1Q9UPV9 953 aa17.16■□□□□ 0.34
ACTN1-214ENST00000555075 C19orf44Q9H6X5 657 aa17.15■□□□□ 0.34
ACTN1-214ENST00000555075 ROCK2O75116 1388 aaKnown RBP17.14■□□□□ 0.33
ACTN1-214ENST00000555075 ABCC11Q96J66 1382 aa17.14■□□□□ 0.33
ACTN1-214ENST00000555075 PTCH1Q13635 1447 aa17.13■□□□□ 0.33
ACTN1-214ENST00000555075 NCOA3Q9Y6Q9 1424 aa17.13■□□□□ 0.33
ACTN1-214ENST00000555075 SAFB2Q14151 953 aaKnown RBP eCLIP17.13■□□□□ 0.33
ACTN1-214ENST00000555075 CADPS2Q86UW7 1296 aa17.13■□□□□ 0.33
ACTN1-214ENST00000555075 WAPLQ7Z5K2 1190 aa17.12■□□□□ 0.33
ACTN1-214ENST00000555075 PRAM1Q96QH2 718 aa17.12■□□□□ 0.33
ACTN1-214ENST00000555075 XRN1Q8IZH2 1706 aaKnown RBP17.12■□□□□ 0.33
ACTN1-214ENST00000555075 ROBO2Q9HCK4 1378 aa17.12■□□□□ 0.33
ACTN1-214ENST00000555075 ROBO1Q9Y6N7 1651 aa17.1■□□□□ 0.33
ACTN1-214ENST00000555075 SETD1AO15047 1707 aaKnown RBP17.1■□□□□ 0.33
ACTN1-214ENST00000555075 NBPF1Q3BBV0 1214 aa17.1■□□□□ 0.33
ACTN1-214ENST00000555075 SIRT1Q96EB6 747 aa17.1■□□□□ 0.33
ACTN1-214ENST00000555075 CARD11Q9BXL7 1154 aa17.1■□□□□ 0.33
ACTN1-214ENST00000555075 FAM135BQ49AJ0 1406 aa17.1■□□□□ 0.33
ACTN1-214ENST00000555075 ASXL1Q8IXJ9 1541 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms