RNA–Protein interactions for RNA: ENST00000554991.5

STRN3-205, Transcript of striatin 3, humanhuman

TSL 5

Gene STRN3, Length 417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-205ENST00000554991 IFT172Q9UG01 1749 aa12.88□□□□□ -0.35
STRN3-205ENST00000554991 ZFYVE9O95405 1425 aa12.88□□□□□ -0.35
STRN3-205ENST00000554991 RIMS2Q9UQ26 1411 aa12.88□□□□□ -0.35
STRN3-205ENST00000554991 IDI1Q13907 227 aa12.87□□□□□ -0.35
STRN3-205ENST00000554991 TXNDC2Q86VQ3 553 aa12.87□□□□□ -0.35
STRN3-205ENST00000554991 NKTRP30414 1462 aaKnown RBP12.86□□□□□ -0.35
STRN3-205ENST00000554991 CHGAP10645 457 aaKnown RBP12.86□□□□□ -0.35
STRN3-205ENST00000554991 NRXN3Q9Y4C0 1643 aa12.86□□□□□ -0.35
STRN3-205ENST00000554991 LRRC7Q96NW7 1537 aa12.86□□□□□ -0.35
STRN3-205ENST00000554991 NEXMIFQ5QGS0 1516 aa12.84□□□□□ -0.35
STRN3-205ENST00000554991 PPP1R15AO75807 674 aaPredicted RBP12.84□□□□□ -0.35
STRN3-205ENST00000554991 LTKP29376 864 aa12.84□□□□□ -0.35
STRN3-205ENST00000554991 SETD1AO15047 1707 aaKnown RBP12.83□□□□□ -0.36
STRN3-205ENST00000554991 UBAP1LF5GYI3 381 aa12.83□□□□□ -0.36
STRN3-205ENST00000554991 ALKQ9UM73 1620 aa12.83□□□□□ -0.36
STRN3-205ENST00000554991 PLEKHG1Q9ULL1 1385 aa12.82□□□□□ -0.36
STRN3-205ENST00000554991 XRN1Q8IZH2 1706 aaKnown RBP12.82□□□□□ -0.36
STRN3-205ENST00000554991 SETBP1Q9Y6X0 1596 aa12.82□□□□□ -0.36
STRN3-205ENST00000554991 TRIM52Q96A61 297 aa12.82□□□□□ -0.36
STRN3-205ENST00000554991 BCANQ96GW7 911 aa12.82□□□□□ -0.36
STRN3-205ENST00000554991 SCAF1Q9H7N4 1312 aaKnown RBP12.81□□□□□ -0.36
STRN3-205ENST00000554991 ROBO1Q9Y6N7 1651 aa12.8□□□□□ -0.36
STRN3-205ENST00000554991 HDGFP51858 240 aaKnown RBP12.79□□□□□ -0.36
STRN3-205ENST00000554991 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.78□□□□□ -0.36
STRN3-205ENST00000554991 NALCNQ8IZF0 1738 aa12.78□□□□□ -0.36
STRN3-205ENST00000554991 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.77□□□□□ -0.36
STRN3-205ENST00000554991 TOM1O60784 492 aa12.77□□□□□ -0.37
STRN3-205ENST00000554991 SLC26A8Q96RN1 970 aa12.77□□□□□ -0.37
STRN3-205ENST00000554991 ZNF326Q5BKZ1 582 aaKnown RBP12.76□□□□□ -0.37
STRN3-205ENST00000554991 SLC4A1APQ9BWU0 796 aaKnown RBP12.76□□□□□ -0.37
STRN3-205ENST00000554991 LAMC1P11047 1609 aa12.76□□□□□ -0.37
STRN3-205ENST00000554991 PHLPP1O60346 1717 aa12.76□□□□□ -0.37
STRN3-205ENST00000554991 ADAMTS13Q76LX8 1427 aa12.75□□□□□ -0.37
STRN3-205ENST00000554991 KNDC1Q76NI1 1749 aa12.74□□□□□ -0.37
STRN3-205ENST00000554991 CCDC144AA2RUR9 1427 aa12.74□□□□□ -0.37
STRN3-205ENST00000554991 SETD5Q9C0A6 1442 aa12.74□□□□□ -0.37
STRN3-205ENST00000554991 PIP4K2BP78356 416 aa12.74□□□□□ -0.37
STRN3-205ENST00000554991 NUTM2DQ5VT03 806 aaPredicted RBP12.74□□□□□ -0.37
STRN3-205ENST00000554991 MED1Q15648 1581 aaPredicted RBP12.73□□□□□ -0.37
STRN3-205ENST00000554991 TMEM94Q12767 1356 aa12.73□□□□□ -0.37
STRN3-205ENST00000554991 PIK3R4Q99570 1358 aa12.72□□□□□ -0.37
STRN3-205ENST00000554991 KCNA6P17658 529 aa12.72□□□□□ -0.37
STRN3-205ENST00000554991 MSH6P52701 1360 aa12.71□□□□□ -0.37
STRN3-205ENST00000554991 RAB3GAP2Q9H2M9 1393 aa12.71□□□□□ -0.37
STRN3-205ENST00000554991 ACIN1Q9UKV3 1341 aaKnown RBP12.71□□□□□ -0.37
STRN3-205ENST00000554991 PROSER2Q86WR7 435 aaPredicted RBP12.69□□□□□ -0.38
STRN3-205ENST00000554991 TBX22Q9Y458 520 aa12.67□□□□□ -0.38
STRN3-205ENST00000554991 DISP3Q9P2K9 1392 aa12.67□□□□□ -0.38
STRN3-205ENST00000554991 NHSL1Q5SYE7 1610 aa12.66□□□□□ -0.38
STRN3-205ENST00000554991 PTPRUQ92729 1446 aa12.66□□□□□ -0.38
STRN3-205ENST00000554991 FOXD1Q16676 465 aa12.66□□□□□ -0.38
STRN3-205ENST00000554991 C14orf37Q86TY3 774 aa12.66□□□□□ -0.38
STRN3-205ENST00000554991 MPHOSPH9Q99550 1183 aa12.66□□□□□ -0.38
STRN3-205ENST00000554991 NCOA3Q9Y6Q9 1424 aa12.65□□□□□ -0.38
STRN3-205ENST00000554991 HSPA1LP34931 641 aa12.65□□□□□ -0.38
STRN3-205ENST00000554991 RBM33Q96EV2 1170 aaKnown RBP12.65□□□□□ -0.38
STRN3-205ENST00000554991 COL16A1Q07092 1604 aaPredicted RBP12.65□□□□□ -0.38
STRN3-205ENST00000554991 SHPRHQ149N8 1683 aa12.64□□□□□ -0.39
STRN3-205ENST00000554991 SPATA31E1Q6ZUB1 1445 aa12.64□□□□□ -0.39
STRN3-205ENST00000554991 DCCP43146 1447 aa12.63□□□□□ -0.39
STRN3-205ENST00000554991 PTCH1Q13635 1447 aa12.63□□□□□ -0.39
STRN3-205ENST00000554991 AHDC1Q5TGY3 1603 aaPredicted RBP12.63□□□□□ -0.39
STRN3-205ENST00000554991 MYOM2P54296 1465 aa12.63□□□□□ -0.39
STRN3-205ENST00000554991 RPGRIP1LQ68CZ1 1315 aa12.62□□□□□ -0.39
STRN3-205ENST00000554991 ASXL1Q8IXJ9 1541 aa12.62□□□□□ -0.39
STRN3-205ENST00000554991 METP08581 1390 aa12.62□□□□□ -0.39
STRN3-205ENST00000554991 FAM135BQ49AJ0 1406 aa12.62□□□□□ -0.39
STRN3-205ENST00000554991 ADGRL3Q9HAR2 1447 aa12.62□□□□□ -0.39
STRN3-205ENST00000554991 CDC42BPGQ6DT37 1551 aa12.61□□□□□ -0.39
STRN3-205ENST00000554991 ANKRD30BQ9BXX2 1392 aa12.61□□□□□ -0.39
STRN3-205ENST00000554991 VGFO15240 615 aaPredicted RBP12.61□□□□□ -0.39
STRN3-205ENST00000554991 AMOTL2Q9Y2J4 779 aa12.61□□□□□ -0.39
STRN3-205ENST00000554991 FMN2Q9NZ56 1722 aa12.6□□□□□ -0.39
STRN3-205ENST00000554991 RGPD8O14715 1765 aaPredicted RBP12.6□□□□□ -0.39
STRN3-205ENST00000554991 PIK3C2GO75747 1445 aa12.6□□□□□ -0.39
STRN3-205ENST00000554991 PRAG1Q86YV5 1406 aa12.6□□□□□ -0.39
STRN3-205ENST00000554991 ARHGEF28Q8N1W1 1705 aaKnown RBP12.58□□□□□ -0.4
STRN3-205ENST00000554991 KIF1AQ12756 1690 aa12.57□□□□□ -0.4
STRN3-205ENST00000554991 KIAA1210Q9ULL0 1709 aa12.57□□□□□ -0.4
STRN3-205ENST00000554991 ATF3P18847 181 aa12.57□□□□□ -0.4
STRN3-205ENST00000554991 RGL3Q3MIN7 710 aa12.57□□□□□ -0.4
STRN3-205ENST00000554991 MST1RQ04912 1400 aa12.56□□□□□ -0.4
STRN3-205ENST00000554991 CADPS2Q86UW7 1296 aa12.56□□□□□ -0.4
STRN3-205ENST00000554991 NRXN1Q9ULB1 1477 aa12.56□□□□□ -0.4
STRN3-205ENST00000554991 ITSN1Q15811 1721 aa12.55□□□□□ -0.4
STRN3-205ENST00000554991 MARF1Q9Y4F3 1742 aaKnown RBP12.54□□□□□ -0.4
STRN3-205ENST00000554991 C19orf44Q9H6X5 657 aa12.54□□□□□ -0.4
STRN3-205ENST00000554991 ADGRF5Q8IZF2 1346 aa12.54□□□□□ -0.4
STRN3-205ENST00000554991 SLAIN2Q9P270 581 aa12.53□□□□□ -0.4
STRN3-205ENST00000554991 ROBO2Q9HCK4 1378 aa12.53□□□□□ -0.4
STRN3-205ENST00000554991 TECPR2O15040 1411 aa12.53□□□□□ -0.4
STRN3-205ENST00000554991 ADGRB2O60241 1585 aa12.52□□□□□ -0.4
STRN3-205ENST00000554991 YTHDC2Q9H6S0 1430 aaKnown RBP12.52□□□□□ -0.41
STRN3-205ENST00000554991 LRPPRCP42704 1394 aaKnown RBP12.51□□□□□ -0.41
STRN3-205ENST00000554991 JCADQ9P266 1359 aa12.5□□□□□ -0.41
STRN3-205ENST00000554991 DLC1Q96QB1 1528 aa12.5□□□□□ -0.41
STRN3-205ENST00000554991 ADGRB1O14514 1584 aa12.5□□□□□ -0.41
STRN3-205ENST00000554991 C1orf167Q5SNV9 1468 aa12.49□□□□□ -0.41
STRN3-205ENST00000554991 HRCP23327 699 aa12.49□□□□□ -0.41
STRN3-205ENST00000554991 QRICH2Q9H0J4 1663 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms