RNA–Protein interactions for RNA: ENST00000554835.1

PRKCH-210, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-210ENST00000554835 NWD1Q149M9 1564 aa28.11■■■□□ 2.09
PRKCH-210ENST00000554835 FAM135BQ49AJ0 1406 aa28.1■■■□□ 2.09
PRKCH-210ENST00000554835 GCC2Q8IWJ2 1684 aa28.1■■■□□ 2.09
PRKCH-210ENST00000554835 PROSER2Q86WR7 435 aaPredicted RBP28.09■■■□□ 2.09
PRKCH-210ENST00000554835 TMEM131LA2VDJ0 1609 aa28.09■■■□□ 2.09
PRKCH-210ENST00000554835 NKTRP30414 1462 aaKnown RBP28.07■■■□□ 2.08
PRKCH-210ENST00000554835 E9PCH4 1651 aa28.07■■■□□ 2.08
PRKCH-210ENST00000554835 RIMS2Q9UQ26 1411 aa28.06■■■□□ 2.08
PRKCH-210ENST00000554835 ROCK1Q13464 1354 aa28.05■■■□□ 2.08
PRKCH-210ENST00000554835 PLEKHG1Q9ULL1 1385 aa28.05■■■□□ 2.08
PRKCH-210ENST00000554835 BCANQ96GW7 911 aa28.04■■■□□ 2.08
PRKCH-210ENST00000554835 ROBO1Q9Y6N7 1651 aa28.03■■■□□ 2.08
PRKCH-210ENST00000554835 RGS17Q9UGC6 210 aaPredicted RBP28.03■■■□□ 2.08
PRKCH-210ENST00000554835 CHD2O14647 1828 aaKnown RBP28.02■■■□□ 2.08
PRKCH-210ENST00000554835 IQGAP3Q86VI3 1631 aa28.01■■■□□ 2.07
PRKCH-210ENST00000554835 PPP1R15AO75807 674 aaPredicted RBP27.97■■■□□ 2.07
PRKCH-210ENST00000554835 CHGAP10645 457 aaKnown RBP27.96■■■□□ 2.07
PRKCH-210ENST00000554835 NUTM2DQ5VT03 806 aaPredicted RBP27.96■■■□□ 2.07
PRKCH-210ENST00000554835 ADAMTS13Q76LX8 1427 aa27.95■■■□□ 2.07
PRKCH-210ENST00000554835 HDGFP51858 240 aaKnown RBP27.95■■■□□ 2.06
PRKCH-210ENST00000554835 TBX22Q9Y458 520 aa27.95■■■□□ 2.06
PRKCH-210ENST00000554835 MSH6P52701 1360 aa27.95■■■□□ 2.06
PRKCH-210ENST00000554835 PPARGC1BQ86YN6 1023 aaKnown RBP27.94■■■□□ 2.06
PRKCH-210ENST00000554835 NUP155O75694 1391 aa27.94■■■□□ 2.06
PRKCH-210ENST00000554835 ITGAEP38570 1179 aa27.93■■■□□ 2.06
PRKCH-210ENST00000554835 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.92■■■□□ 2.06
PRKCH-210ENST00000554835 SLAIN2Q9P270 581 aa27.92■■■□□ 2.06
PRKCH-210ENST00000554835 DIP2AQ14689 1571 aa27.86■■■□□ 2.05
PRKCH-210ENST00000554835 NCOA3Q9Y6Q9 1424 aa27.84■■■□□ 2.05
PRKCH-210ENST00000554835 PHLPP1O60346 1717 aa27.84■■■□□ 2.05
PRKCH-210ENST00000554835 POTEAQ6S8J7 498 aa27.83■■■□□ 2.05
PRKCH-210ENST00000554835 PIK3R4Q99570 1358 aa27.83■■■□□ 2.05
PRKCH-210ENST00000554835 PTPRUQ92729 1446 aa27.83■■■□□ 2.05
PRKCH-210ENST00000554835 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.81■■■□□ 2.04
PRKCH-210ENST00000554835 SPHKAPQ2M3C7 1700 aa27.79■■■□□ 2.04
PRKCH-210ENST00000554835 COL16A1Q07092 1604 aaPredicted RBP27.79■■■□□ 2.04
PRKCH-210ENST00000554835 NRXN3Q9Y4C0 1643 aa27.78■■■□□ 2.04
PRKCH-210ENST00000554835 TRPM2O94759 1503 aa27.77■■■□□ 2.04
PRKCH-210ENST00000554835 AMOTL2Q9Y2J4 779 aa27.77■■■□□ 2.04
PRKCH-210ENST00000554835 JCADQ9P266 1359 aa27.76■■■□□ 2.03
PRKCH-210ENST00000554835 C14orf37Q86TY3 774 aa27.76■■■□□ 2.03
PRKCH-210ENST00000554835 C19orf44Q9H6X5 657 aa27.76■■■□□ 2.03
PRKCH-210ENST00000554835 SETBP1Q9Y6X0 1596 aa27.73■■■□□ 2.03
PRKCH-210ENST00000554835 CADPS2Q86UW7 1296 aa27.72■■■□□ 2.03
PRKCH-210ENST00000554835 XRN1Q8IZH2 1706 aaKnown RBP27.72■■■□□ 2.03
PRKCH-210ENST00000554835 RRBP1Q9P2E9 1410 aaKnown RBP27.71■■■□□ 2.03
PRKCH-210ENST00000554835 ATF3P18847 181 aa27.7■■■□□ 2.02
PRKCH-210ENST00000554835 CLTCL1P53675 1640 aa27.7■■■□□ 2.02
PRKCH-210ENST00000554835 AHDC1Q5TGY3 1603 aaPredicted RBP27.7■■■□□ 2.02
PRKCH-210ENST00000554835 LRP6O75581 1613 aa27.68■■■□□ 2.02
PRKCH-210ENST00000554835 METP08581 1390 aa27.68■■■□□ 2.02
PRKCH-210ENST00000554835 NAIPQ13075 1403 aa27.67■■■□□ 2.02
PRKCH-210ENST00000554835 ZNF326Q5BKZ1 582 aaKnown RBP27.67■■■□□ 2.02
PRKCH-210ENST00000554835 BRINP3Q76B58 766 aa27.65■■■□□ 2.02
PRKCH-210ENST00000554835 NEXMIFQ5QGS0 1516 aa27.65■■■□□ 2.02
PRKCH-210ENST00000554835 DCCP43146 1447 aa27.63■■■□□ 2.01
PRKCH-210ENST00000554835 SPATA31A6Q5VVP1 1343 aa27.62■■■□□ 2.01
PRKCH-210ENST00000554835 SHPRHQ149N8 1683 aa27.61■■■□□ 2.01
PRKCH-210ENST00000554835 MST1RQ04912 1400 aa27.59■■■□□ 2.01
PRKCH-210ENST00000554835 SETD1AO15047 1707 aaKnown RBP27.59■■■□□ 2.01
PRKCH-210ENST00000554835 KIF1BO60333 1816 aa27.57■■■□□ 2
PRKCH-210ENST00000554835 ASXL1Q8IXJ9 1541 aa27.57■■■□□ 2
PRKCH-210ENST00000554835 ADGRL3Q9HAR2 1447 aa27.54■■■□□ 2
PRKCH-210ENST00000554835 NALCNQ8IZF0 1738 aa27.53■■■□□ 2
PRKCH-210ENST00000554835 HFM1A2PYH4 1435 aa27.53■■■□□ 2
PRKCH-210ENST00000554835 NHSL1Q5SYE7 1610 aa27.52■■■□□ 2
PRKCH-210ENST00000554835 MEX3CQ5U5Q3 659 aaKnown RBP27.51■■□□□ 1.99
PRKCH-210ENST00000554835 SETD5Q9C0A6 1442 aa27.5■■□□□ 1.99
PRKCH-210ENST00000554835 DDX17Q92841 729 aaKnown RBP27.49■■□□□ 1.99
PRKCH-210ENST00000554835 TRIM52Q96A61 297 aa27.49■■□□□ 1.99
PRKCH-210ENST00000554835 NUTM2BA6NNL0 878 aaPredicted RBP27.47■■□□□ 1.99
PRKCH-210ENST00000554835 NUTM2EB1AL46 878 aaPredicted RBP27.47■■□□□ 1.99
PRKCH-210ENST00000554835 ZNF772Q68DY9 489 aaPredicted RBP27.47■■□□□ 1.99
PRKCH-210ENST00000554835 NUTM2AQ8IVF1 878 aaPredicted RBP27.47■■□□□ 1.99
PRKCH-210ENST00000554835 ROBO2Q9HCK4 1378 aa27.45■■□□□ 1.98
PRKCH-210ENST00000554835 VGFO15240 615 aaPredicted RBP27.44■■□□□ 1.98
PRKCH-210ENST00000554835 SLC4A1APQ9BWU0 796 aaKnown RBP27.44■■□□□ 1.98
PRKCH-210ENST00000554835 PTCH1Q13635 1447 aa27.43■■□□□ 1.98
PRKCH-210ENST00000554835 C1orf167Q5SNV9 1468 aa27.42■■□□□ 1.98
PRKCH-210ENST00000554835 PPLO60437 1756 aa27.42■■□□□ 1.98
PRKCH-210ENST00000554835 LRRC59Q96AG4 307 aaKnown RBP27.41■■□□□ 1.98
PRKCH-210ENST00000554835 RPGRIP1LQ68CZ1 1315 aa27.41■■□□□ 1.98
PRKCH-210ENST00000554835 PRAG1Q86YV5 1406 aa27.4■■□□□ 1.98
PRKCH-210ENST00000554835 PNPLA6Q8IY17 1366 aa27.39■■□□□ 1.98
PRKCH-210ENST00000554835 FOXD1Q16676 465 aa27.39■■□□□ 1.98
PRKCH-210ENST00000554835 AFF2P51816 1311 aa27.38■■□□□ 1.97
PRKCH-210ENST00000554835 LAMC1P11047 1609 aa27.37■■□□□ 1.97
PRKCH-210ENST00000554835 ORAI2Q96SN7 254 aa27.35■■□□□ 1.97
PRKCH-210ENST00000554835 RXRBP28702 533 aa27.34■■□□□ 1.97
PRKCH-210ENST00000554835 UPF1Q92900 1129 aaKnown RBP eCLIP27.33■■□□□ 1.97
PRKCH-210ENST00000554835 SOS2Q07890 1332 aaPredicted RBP27.31■■□□□ 1.96
PRKCH-210ENST00000554835 C8orf37Q96NL8 207 aa27.3■■□□□ 1.96
PRKCH-210ENST00000554835 ADGRF5Q8IZF2 1346 aa27.3■■□□□ 1.96
PRKCH-210ENST00000554835 CDK12Q9NYV4 1490 aaPredicted RBP27.3■■□□□ 1.96
PRKCH-210ENST00000554835 SPATA31E1Q6ZUB1 1445 aa27.28■■□□□ 1.96
PRKCH-210ENST00000554835 RGL3Q3MIN7 710 aa27.25■■□□□ 1.95
PRKCH-210ENST00000554835 CCDC144AA2RUR9 1427 aa27.24■■□□□ 1.95
PRKCH-210ENST00000554835 ADAMTS2O95450 1211 aa27.24■■□□□ 1.95
PRKCH-210ENST00000554835 MPHOSPH9Q99550 1183 aa27.24■■□□□ 1.95
PRKCH-210ENST00000554835 QTRT2Q9H974 415 aaKnown RBP27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms