RNA–Protein interactions for RNA: ENST00000554791.5

CGRRF1-202, Transcript of cell growth regulator with ring finger domain 1, humanhuman

TSL 5

Gene CGRRF1, Length 719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGRRF1-202ENST00000554791 PPP1R15AO75807 674 aaPredicted RBP35.48■■■■□ 3.27
CGRRF1-202ENST00000554791 NKTRP30414 1462 aaKnown RBP35.47■■■■□ 3.27
CGRRF1-202ENST00000554791 NWD1Q149M9 1564 aa35.46■■■■□ 3.27
CGRRF1-202ENST00000554791 GCC2Q8IWJ2 1684 aa35.46■■■■□ 3.27
CGRRF1-202ENST00000554791 MYO5BQ9ULV0 1848 aa35.46■■■■□ 3.27
CGRRF1-202ENST00000554791 HDGFP51858 240 aaKnown RBP35.44■■■■□ 3.26
CGRRF1-202ENST00000554791 UNC13BO14795 1591 aa35.42■■■■□ 3.26
CGRRF1-202ENST00000554791 RIMS2Q9UQ26 1411 aa35.42■■■■□ 3.26
CGRRF1-202ENST00000554791 CHGAP10645 457 aaKnown RBP35.42■■■■□ 3.26
CGRRF1-202ENST00000554791 ZFYVE9O95405 1425 aa35.41■■■■□ 3.26
CGRRF1-202ENST00000554791 ROBO1Q9Y6N7 1651 aa35.41■■■■□ 3.26
CGRRF1-202ENST00000554791 MSH6P52701 1360 aa35.4■■■■□ 3.26
CGRRF1-202ENST00000554791 PLEKHG1Q9ULL1 1385 aa35.4■■■■□ 3.26
CGRRF1-202ENST00000554791 TMEM131LA2VDJ0 1609 aa35.39■■■■□ 3.26
CGRRF1-202ENST00000554791 ROCK1Q13464 1354 aa35.34■■■■□ 3.25
CGRRF1-202ENST00000554791 E9PCH4 1651 aa35.33■■■■□ 3.25
CGRRF1-202ENST00000554791 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.33■■■■□ 3.25
CGRRF1-202ENST00000554791 CHD2O14647 1828 aaKnown RBP35.32■■■■□ 3.25
CGRRF1-202ENST00000554791 ITGAEP38570 1179 aa35.3■■■■□ 3.24
CGRRF1-202ENST00000554791 RGS17Q9UGC6 210 aaPredicted RBP35.3■■■■□ 3.24
CGRRF1-202ENST00000554791 IQGAP3Q86VI3 1631 aa35.29■■■■□ 3.24
CGRRF1-202ENST00000554791 NUTM2DQ5VT03 806 aaPredicted RBP35.28■■■■□ 3.24
CGRRF1-202ENST00000554791 SLAIN2Q9P270 581 aa35.28■■■■□ 3.24
CGRRF1-202ENST00000554791 TBX22Q9Y458 520 aa35.27■■■■□ 3.24
CGRRF1-202ENST00000554791 NUP155O75694 1391 aa35.25■■■■□ 3.23
CGRRF1-202ENST00000554791 C14orf37Q86TY3 774 aa35.25■■■■□ 3.23
CGRRF1-202ENST00000554791 PHLPP1O60346 1717 aa35.23■■■■□ 3.23
CGRRF1-202ENST00000554791 DIP2AQ14689 1571 aa35.2■■■■□ 3.23
CGRRF1-202ENST00000554791 ADAMTS13Q76LX8 1427 aa35.19■■■■□ 3.22
CGRRF1-202ENST00000554791 NCOA3Q9Y6Q9 1424 aa35.17■■■■□ 3.22
CGRRF1-202ENST00000554791 PPARGC1BQ86YN6 1023 aaKnown RBP35.16■■■■□ 3.22
CGRRF1-202ENST00000554791 PIK3R4Q99570 1358 aa35.13■■■■□ 3.21
CGRRF1-202ENST00000554791 JCADQ9P266 1359 aa35.13■■■■□ 3.21
CGRRF1-202ENST00000554791 POTEAQ6S8J7 498 aa35.13■■■■□ 3.21
CGRRF1-202ENST00000554791 TRPM2O94759 1503 aa35.11■■■■□ 3.21
CGRRF1-202ENST00000554791 ATF3P18847 181 aa35.1■■■■□ 3.21
CGRRF1-202ENST00000554791 CADPS2Q86UW7 1296 aa35.1■■■■□ 3.21
CGRRF1-202ENST00000554791 C19orf44Q9H6X5 657 aa35.08■■■■□ 3.21
CGRRF1-202ENST00000554791 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.08■■■■□ 3.21
CGRRF1-202ENST00000554791 AMOTL2Q9Y2J4 779 aa35.07■■■■□ 3.2
CGRRF1-202ENST00000554791 SPHKAPQ2M3C7 1700 aa35.06■■■■□ 3.2
CGRRF1-202ENST00000554791 COL16A1Q07092 1604 aaPredicted RBP35.06■■■■□ 3.2
CGRRF1-202ENST00000554791 ZNF326Q5BKZ1 582 aaKnown RBP35.04■■■■□ 3.2
CGRRF1-202ENST00000554791 PTPRUQ92729 1446 aa35.01■■■■□ 3.2
CGRRF1-202ENST00000554791 MEX3CQ5U5Q3 659 aaKnown RBP34.97■■■■□ 3.19
CGRRF1-202ENST00000554791 AHDC1Q5TGY3 1603 aaPredicted RBP34.96■■■■□ 3.19
CGRRF1-202ENST00000554791 SPATA31A6Q5VVP1 1343 aa34.96■■■■□ 3.19
CGRRF1-202ENST00000554791 SETBP1Q9Y6X0 1596 aa34.96■■■■□ 3.19
CGRRF1-202ENST00000554791 NRXN3Q9Y4C0 1643 aa34.95■■■■□ 3.19
CGRRF1-202ENST00000554791 XRN1Q8IZH2 1706 aaKnown RBP34.92■■■■□ 3.18
CGRRF1-202ENST00000554791 LRP6O75581 1613 aa34.91■■■■□ 3.18
CGRRF1-202ENST00000554791 DCCP43146 1447 aa34.9■■■■□ 3.18
CGRRF1-202ENST00000554791 BRINP3Q76B58 766 aa34.9■■■■□ 3.18
CGRRF1-202ENST00000554791 SHPRHQ149N8 1683 aa34.89■■■■□ 3.18
CGRRF1-202ENST00000554791 CLTCL1P53675 1640 aa34.88■■■■□ 3.17
CGRRF1-202ENST00000554791 METP08581 1390 aa34.87■■■■□ 3.17
CGRRF1-202ENST00000554791 SETD1AO15047 1707 aaKnown RBP34.86■■■■□ 3.17
CGRRF1-202ENST00000554791 RRBP1Q9P2E9 1410 aaKnown RBP34.83■■■■□ 3.17
CGRRF1-202ENST00000554791 NEXMIFQ5QGS0 1516 aa34.83■■■■□ 3.17
CGRRF1-202ENST00000554791 ZNF772Q68DY9 489 aaPredicted RBP34.83■■■■□ 3.17
CGRRF1-202ENST00000554791 ASXL1Q8IXJ9 1541 aa34.82■■■■□ 3.16
CGRRF1-202ENST00000554791 KIF1BO60333 1816 aa34.82■■■■□ 3.16
CGRRF1-202ENST00000554791 NAIPQ13075 1403 aa34.81■■■■□ 3.16
CGRRF1-202ENST00000554791 MST1RQ04912 1400 aa34.8■■■■□ 3.16
CGRRF1-202ENST00000554791 NUTM2BA6NNL0 878 aaPredicted RBP34.79■■■■□ 3.16
CGRRF1-202ENST00000554791 NUTM2EB1AL46 878 aaPredicted RBP34.79■■■■□ 3.16
CGRRF1-202ENST00000554791 NUTM2AQ8IVF1 878 aaPredicted RBP34.79■■■■□ 3.16
CGRRF1-202ENST00000554791 TRIM52Q96A61 297 aa34.77■■■■□ 3.16
CGRRF1-202ENST00000554791 ADGRL3Q9HAR2 1447 aa34.76■■■■□ 3.16
CGRRF1-202ENST00000554791 NHSL1Q5SYE7 1610 aa34.73■■■■□ 3.15
CGRRF1-202ENST00000554791 SETD5Q9C0A6 1442 aa34.72■■■■□ 3.15
CGRRF1-202ENST00000554791 NALCNQ8IZF0 1738 aa34.71■■■■□ 3.15
CGRRF1-202ENST00000554791 VGFO15240 615 aaPredicted RBP34.69■■■■□ 3.14
CGRRF1-202ENST00000554791 LRRC59Q96AG4 307 aaKnown RBP34.69■■■■□ 3.14
CGRRF1-202ENST00000554791 DDX17Q92841 729 aaKnown RBP34.66■■■■□ 3.14
CGRRF1-202ENST00000554791 HFM1A2PYH4 1435 aa34.65■■■■□ 3.14
CGRRF1-202ENST00000554791 RXRBP28702 533 aa34.65■■■■□ 3.14
CGRRF1-202ENST00000554791 SLC4A1APQ9BWU0 796 aaKnown RBP34.65■■■■□ 3.14
CGRRF1-202ENST00000554791 PTCH1Q13635 1447 aa34.63■■■■□ 3.13
CGRRF1-202ENST00000554791 AFF2P51816 1311 aa34.62■■■■□ 3.13
CGRRF1-202ENST00000554791 RPGRIP1LQ68CZ1 1315 aa34.6■■■■□ 3.13
CGRRF1-202ENST00000554791 C1orf167Q5SNV9 1468 aa34.59■■■■□ 3.13
CGRRF1-202ENST00000554791 C8orf37Q96NL8 207 aa34.58■■■■□ 3.13
CGRRF1-202ENST00000554791 PNPLA6Q8IY17 1366 aa34.58■■■■□ 3.13
CGRRF1-202ENST00000554791 ROBO2Q9HCK4 1378 aa34.58■■■■□ 3.13
CGRRF1-202ENST00000554791 UPF1Q92900 1129 aaKnown RBP eCLIP34.55■■■■□ 3.12
CGRRF1-202ENST00000554791 PPLO60437 1756 aa34.54■■■■□ 3.12
CGRRF1-202ENST00000554791 CDK12Q9NYV4 1490 aaPredicted RBP34.52■■■■□ 3.12
CGRRF1-202ENST00000554791 ORAI2Q96SN7 254 aa34.5■■■■□ 3.11
CGRRF1-202ENST00000554791 FOXD1Q16676 465 aa34.49■■■■□ 3.11
CGRRF1-202ENST00000554791 PRAG1Q86YV5 1406 aa34.48■■■■□ 3.11
CGRRF1-202ENST00000554791 ADAMTS2O95450 1211 aa34.47■■■■□ 3.11
CGRRF1-202ENST00000554791 LAMC1P11047 1609 aa34.46■■■■□ 3.11
CGRRF1-202ENST00000554791 QTRT2Q9H974 415 aaKnown RBP34.46■■■■□ 3.11
CGRRF1-202ENST00000554791 NGLY1Q96IV0 654 aa34.45■■■■□ 3.11
CGRRF1-202ENST00000554791 CCDC144AA2RUR9 1427 aa34.44■■■■□ 3.1
CGRRF1-202ENST00000554791 SOS2Q07890 1332 aaPredicted RBP34.43■■■■□ 3.1
CGRRF1-202ENST00000554791 RBM6P78332 1123 aaKnown RBP34.42■■■■□ 3.1
CGRRF1-202ENST00000554791 RGL3Q3MIN7 710 aa34.4■■■■□ 3.1
CGRRF1-202ENST00000554791 RGS12O14924 1447 aa34.38■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms