RNA–Protein interactions for RNA: ENST00000554756.1

RIPK3-204, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-204ENST00000554756 SCAF11Q99590 1463 aaKnown RBP17.7■□□□□ 0.42
RIPK3-204ENST00000554756 NPHP4O75161 1426 aaPredicted RBP17.69■□□□□ 0.42
RIPK3-204ENST00000554756 ANKRD30BQ9BXX2 1392 aa17.69■□□□□ 0.42
RIPK3-204ENST00000554756 PPP1R15AO75807 674 aaPredicted RBP17.68■□□□□ 0.42
RIPK3-204ENST00000554756 NEURL4Q96JN8 1562 aa17.68■□□□□ 0.42
RIPK3-204ENST00000554756 HDGFP51858 240 aaKnown RBP17.68■□□□□ 0.42
RIPK3-204ENST00000554756 RGL3Q3MIN7 710 aa17.67■□□□□ 0.42
RIPK3-204ENST00000554756 BCANQ96GW7 911 aa17.67■□□□□ 0.42
RIPK3-204ENST00000554756 MYO5BQ9ULV0 1848 aa17.67■□□□□ 0.42
RIPK3-204ENST00000554756 ZFYVE9O95405 1425 aa17.67■□□□□ 0.42
RIPK3-204ENST00000554756 POLR1AO95602 1720 aaPredicted RBP17.66■□□□□ 0.42
RIPK3-204ENST00000554756 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.66■□□□□ 0.42
RIPK3-204ENST00000554756 MED14O60244 1454 aa17.65■□□□□ 0.42
RIPK3-204ENST00000554756 DHX57Q6P158 1386 aaKnown RBP17.64■□□□□ 0.41
RIPK3-204ENST00000554756 KIF1BO60333 1816 aa17.62■□□□□ 0.41
RIPK3-204ENST00000554756 SLC26A8Q96RN1 970 aa17.62■□□□□ 0.41
RIPK3-204ENST00000554756 SPATA31E1Q6ZUB1 1445 aa17.62■□□□□ 0.41
RIPK3-204ENST00000554756 ZNF335Q9H4Z2 1342 aaPredicted RBP17.61■□□□□ 0.41
RIPK3-204ENST00000554756 CLSPNQ9HAW4 1339 aa17.61■□□□□ 0.41
RIPK3-204ENST00000554756 IQGAP1P46940 1657 aa17.61■□□□□ 0.41
RIPK3-204ENST00000554756 PLEKHG1Q9ULL1 1385 aa17.6■□□□□ 0.41
RIPK3-204ENST00000554756 RPGRIP1LQ68CZ1 1315 aa17.6■□□□□ 0.41
RIPK3-204ENST00000554756 NEXMIFQ5QGS0 1516 aa17.59■□□□□ 0.41
RIPK3-204ENST00000554756 VGFO15240 615 aaPredicted RBP17.57■□□□□ 0.4
RIPK3-204ENST00000554756 SIN3AQ96ST3 1273 aa17.57■□□□□ 0.4
RIPK3-204ENST00000554756 NEUROD1Q13562 356 aa17.55■□□□□ 0.4
RIPK3-204ENST00000554756 ADGRF5Q8IZF2 1346 aa17.54■□□□□ 0.4
RIPK3-204ENST00000554756 ADAMTS13Q76LX8 1427 aa17.53■□□□□ 0.4
RIPK3-204ENST00000554756 CERKQ8TCT0 537 aa17.53■□□□□ 0.4
RIPK3-204ENST00000554756 KDM2AQ9Y2K7 1162 aa17.53■□□□□ 0.4
RIPK3-204ENST00000554756 TBX22Q9Y458 520 aa17.53■□□□□ 0.4
RIPK3-204ENST00000554756 DCAF11Q8TEB1 546 aa17.51■□□□□ 0.39
RIPK3-204ENST00000554756 LTBP4Q8N2S1 1624 aa17.51■□□□□ 0.39
RIPK3-204ENST00000554756 PPLO60437 1756 aa17.5■□□□□ 0.39
RIPK3-204ENST00000554756 SETBP1Q9Y6X0 1596 aa17.49■□□□□ 0.39
RIPK3-204ENST00000554756 KCNA6P17658 529 aa17.48■□□□□ 0.39
RIPK3-204ENST00000554756 NRXN3Q9Y4C0 1643 aa17.48■□□□□ 0.39
RIPK3-204ENST00000554756 METP08581 1390 aa17.46■□□□□ 0.39
RIPK3-204ENST00000554756 IFT172Q9UG01 1749 aa17.46■□□□□ 0.39
RIPK3-204ENST00000554756 DIP2AQ14689 1571 aa17.46■□□□□ 0.39
RIPK3-204ENST00000554756 MYOM2P54296 1465 aa17.45■□□□□ 0.38
RIPK3-204ENST00000554756 L3MBTL2Q969R5 705 aa17.44■□□□□ 0.38
RIPK3-204ENST00000554756 RBM33Q96EV2 1170 aaKnown RBP17.44■□□□□ 0.38
RIPK3-204ENST00000554756 AMOTL2Q9Y2J4 779 aa17.44■□□□□ 0.38
RIPK3-204ENST00000554756 CPS1P31327 1500 aa17.44■□□□□ 0.38
RIPK3-204ENST00000554756 ALKQ9UM73 1620 aa17.44■□□□□ 0.38
RIPK3-204ENST00000554756 PTPRUQ92729 1446 aa17.44■□□□□ 0.38
RIPK3-204ENST00000554756 STRCP1A6NGW2 1772 aa17.43■□□□□ 0.38
RIPK3-204ENST00000554756 PROSER2Q86WR7 435 aaPredicted RBP17.43■□□□□ 0.38
RIPK3-204ENST00000554756 PIK3C2GO75747 1445 aa17.43■□□□□ 0.38
RIPK3-204ENST00000554756 CFAP70Q5T0N1 1121 aa17.43■□□□□ 0.38
RIPK3-204ENST00000554756 PIK3R4Q99570 1358 aa17.42■□□□□ 0.38
RIPK3-204ENST00000554756 NRXN1Q9ULB1 1477 aa17.42■□□□□ 0.38
RIPK3-204ENST00000554756 TMEM132EQ6IEE7 984 aa17.41■□□□□ 0.38
RIPK3-204ENST00000554756 C14orf93Q9H972 538 aaKnown RBP17.41■□□□□ 0.38
RIPK3-204ENST00000554756 LRRC7Q96NW7 1537 aa17.41■□□□□ 0.38
RIPK3-204ENST00000554756 STAC3Q96MF2 364 aa17.4■□□□□ 0.38
RIPK3-204ENST00000554756 NWD1Q149M9 1564 aa17.4■□□□□ 0.38
RIPK3-204ENST00000554756 STK26Q9P289 416 aa17.39■□□□□ 0.37
RIPK3-204ENST00000554756 TMEM94Q12767 1356 aa17.38■□□□□ 0.37
RIPK3-204ENST00000554756 TONSLQ96HA7 1378 aa17.38■□□□□ 0.37
RIPK3-204ENST00000554756 CHD2O14647 1828 aaKnown RBP17.37■□□□□ 0.37
RIPK3-204ENST00000554756 NKTRP30414 1462 aaKnown RBP17.37■□□□□ 0.37
RIPK3-204ENST00000554756 SETD1AO15047 1707 aaKnown RBP17.36■□□□□ 0.37
RIPK3-204ENST00000554756 ASXL1Q8IXJ9 1541 aa17.34■□□□□ 0.37
RIPK3-204ENST00000554756 C14orf37Q86TY3 774 aa17.34■□□□□ 0.37
RIPK3-204ENST00000554756 IQSEC2Q5JU85 1478 aa17.34■□□□□ 0.37
RIPK3-204ENST00000554756 PRAG1Q86YV5 1406 aa17.33■□□□□ 0.37
RIPK3-204ENST00000554756 LRPPRCP42704 1394 aaKnown RBP17.33■□□□□ 0.36
RIPK3-204ENST00000554756 XRN1Q8IZH2 1706 aaKnown RBP17.33■□□□□ 0.36
RIPK3-204ENST00000554756 UBAP1LF5GYI3 381 aa17.33■□□□□ 0.36
RIPK3-204ENST00000554756 ROBO2Q9HCK4 1378 aa17.32■□□□□ 0.36
RIPK3-204ENST00000554756 ZNF316A6NFI3 1004 aaPredicted RBP17.32■□□□□ 0.36
RIPK3-204ENST00000554756 YTHDC2Q9H6S0 1430 aaKnown RBP17.31■□□□□ 0.36
RIPK3-204ENST00000554756 NBPF1Q3BBV0 1214 aa17.3■□□□□ 0.36
RIPK3-204ENST00000554756 LAMC1P11047 1609 aa17.3■□□□□ 0.36
RIPK3-204ENST00000554756 NBPF8Q3BBV2 869 aa17.3■□□□□ 0.36
RIPK3-204ENST00000554756 ABCC11Q96J66 1382 aa17.29■□□□□ 0.36
RIPK3-204ENST00000554756 WAPLQ7Z5K2 1190 aa17.29■□□□□ 0.36
RIPK3-204ENST00000554756 MSH6P52701 1360 aa17.28■□□□□ 0.36
RIPK3-204ENST00000554756 TRAK1Q9UPV9 953 aa17.28■□□□□ 0.36
RIPK3-204ENST00000554756 PTCH1Q13635 1447 aa17.28■□□□□ 0.36
RIPK3-204ENST00000554756 ADGRB1O14514 1584 aa17.28■□□□□ 0.36
RIPK3-204ENST00000554756 TOM1O60784 492 aa17.28■□□□□ 0.36
RIPK3-204ENST00000554756 XIRP1Q702N8 1843 aaKnown RBP17.27■□□□□ 0.36
RIPK3-204ENST00000554756 PIP4K2BP78356 416 aa17.27■□□□□ 0.35
RIPK3-204ENST00000554756 SCAF1Q9H7N4 1312 aaKnown RBP17.27■□□□□ 0.35
RIPK3-204ENST00000554756 DISP3Q9P2K9 1392 aa17.26■□□□□ 0.35
RIPK3-204ENST00000554756 PLEKHH1Q9ULM0 1364 aa17.26■□□□□ 0.35
RIPK3-204ENST00000554756 NCOA3Q9Y6Q9 1424 aa17.26■□□□□ 0.35
RIPK3-204ENST00000554756 TECPR2O15040 1411 aa17.26■□□□□ 0.35
RIPK3-204ENST00000554756 C19orf44Q9H6X5 657 aa17.25■□□□□ 0.35
RIPK3-204ENST00000554756 SAFB2Q14151 953 aaKnown RBP eCLIP17.25■□□□□ 0.35
RIPK3-204ENST00000554756 DIEXFQ68CQ4 756 aaKnown RBP17.25■□□□□ 0.35
RIPK3-204ENST00000554756 PRAM1Q96QH2 718 aa17.25■□□□□ 0.35
RIPK3-204ENST00000554756 POGKQ9P215 609 aa17.24■□□□□ 0.35
RIPK3-204ENST00000554756 ATF3P18847 181 aa17.23■□□□□ 0.35
RIPK3-204ENST00000554756 SIRT1Q96EB6 747 aa17.23■□□□□ 0.35
RIPK3-204ENST00000554756 ROCK2O75116 1388 aaKnown RBP17.22■□□□□ 0.35
RIPK3-204ENST00000554756 ADGRL3Q9HAR2 1447 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms