RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 HDGFP51858 240 aaKnown RBP19.25■□□□□ 0.67
RDH11-207ENST00000554731 RBM33Q96EV2 1170 aaKnown RBP19.25■□□□□ 0.67
RDH11-207ENST00000554731 PPP1R15AO75807 674 aaPredicted RBP19.24■□□□□ 0.67
RDH11-207ENST00000554731 ZFYVE9O95405 1425 aa19.24■□□□□ 0.67
RDH11-207ENST00000554731 NWD1Q149M9 1564 aa19.23■□□□□ 0.67
RDH11-207ENST00000554731 PLEKHG1Q9ULL1 1385 aa19.23■□□□□ 0.67
RDH11-207ENST00000554731 RIMS2Q9UQ26 1411 aa19.23■□□□□ 0.67
RDH11-207ENST00000554731 MSH6P52701 1360 aa19.21■□□□□ 0.67
RDH11-207ENST00000554731 UNC13BO14795 1591 aa19.2■□□□□ 0.66
RDH11-207ENST00000554731 CHGAP10645 457 aaKnown RBP19.2■□□□□ 0.66
RDH11-207ENST00000554731 ROCK1Q13464 1354 aa19.19■□□□□ 0.66
RDH11-207ENST00000554731 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.19■□□□□ 0.66
RDH11-207ENST00000554731 GCC2Q8IWJ2 1684 aa19.19■□□□□ 0.66
RDH11-207ENST00000554731 TMEM131LA2VDJ0 1609 aa19.18■□□□□ 0.66
RDH11-207ENST00000554731 ROBO1Q9Y6N7 1651 aa19.18■□□□□ 0.66
RDH11-207ENST00000554731 RGS17Q9UGC6 210 aaPredicted RBP19.18■□□□□ 0.66
RDH11-207ENST00000554731 MYO5BQ9ULV0 1848 aa19.18■□□□□ 0.66
RDH11-207ENST00000554731 TBX22Q9Y458 520 aa19.17■□□□□ 0.66
RDH11-207ENST00000554731 SLAIN2Q9P270 581 aa19.16■□□□□ 0.66
RDH11-207ENST00000554731 E9PCH4 1651 aa19.14■□□□□ 0.65
RDH11-207ENST00000554731 CHD2O14647 1828 aaKnown RBP19.14■□□□□ 0.65
RDH11-207ENST00000554731 NUTM2DQ5VT03 806 aaPredicted RBP19.13■□□□□ 0.65
RDH11-207ENST00000554731 NUP155O75694 1391 aa19.13■□□□□ 0.65
RDH11-207ENST00000554731 IQGAP3Q86VI3 1631 aa19.13■□□□□ 0.65
RDH11-207ENST00000554731 NCOA3Q9Y6Q9 1424 aa19.12■□□□□ 0.65
RDH11-207ENST00000554731 ITGAEP38570 1179 aa19.12■□□□□ 0.65
RDH11-207ENST00000554731 ADAMTS13Q76LX8 1427 aa19.11■□□□□ 0.65
RDH11-207ENST00000554731 C14orf37Q86TY3 774 aa19.11■□□□□ 0.65
RDH11-207ENST00000554731 PIK3R4Q99570 1358 aa19.09■□□□□ 0.65
RDH11-207ENST00000554731 DIP2AQ14689 1571 aa19.09■□□□□ 0.65
RDH11-207ENST00000554731 JCADQ9P266 1359 aa19.08■□□□□ 0.65
RDH11-207ENST00000554731 POTEAQ6S8J7 498 aa19.08■□□□□ 0.64
RDH11-207ENST00000554731 PHLPP1O60346 1717 aa19.07■□□□□ 0.64
RDH11-207ENST00000554731 CADPS2Q86UW7 1296 aa19.06■□□□□ 0.64
RDH11-207ENST00000554731 C19orf44Q9H6X5 657 aa19.06■□□□□ 0.64
RDH11-207ENST00000554731 ATF3P18847 181 aa19.05■□□□□ 0.64
RDH11-207ENST00000554731 PPARGC1BQ86YN6 1023 aaKnown RBP19.04■□□□□ 0.64
RDH11-207ENST00000554731 AMOTL2Q9Y2J4 779 aa19.04■□□□□ 0.64
RDH11-207ENST00000554731 TRPM2O94759 1503 aa19.04■□□□□ 0.64
RDH11-207ENST00000554731 COL16A1Q07092 1604 aaPredicted RBP19.01■□□□□ 0.63
RDH11-207ENST00000554731 PTPRUQ92729 1446 aa19■□□□□ 0.63
RDH11-207ENST00000554731 SIPA1L2Q9P2F8 1722 aaPredicted RBP19■□□□□ 0.63
RDH11-207ENST00000554731 ZNF326Q5BKZ1 582 aaKnown RBP19■□□□□ 0.63
RDH11-207ENST00000554731 SPATA31A6Q5VVP1 1343 aa18.99■□□□□ 0.63
RDH11-207ENST00000554731 SPHKAPQ2M3C7 1700 aa18.97■□□□□ 0.63
RDH11-207ENST00000554731 AHDC1Q5TGY3 1603 aaPredicted RBP18.97■□□□□ 0.63
RDH11-207ENST00000554731 SETBP1Q9Y6X0 1596 aa18.97■□□□□ 0.63
RDH11-207ENST00000554731 MEX3CQ5U5Q3 659 aaKnown RBP18.96■□□□□ 0.63
RDH11-207ENST00000554731 DCCP43146 1447 aa18.96■□□□□ 0.63
RDH11-207ENST00000554731 BRINP3Q76B58 766 aa18.95■□□□□ 0.62
RDH11-207ENST00000554731 NRXN3Q9Y4C0 1643 aa18.94■□□□□ 0.62
RDH11-207ENST00000554731 XRN1Q8IZH2 1706 aaKnown RBP18.94■□□□□ 0.62
RDH11-207ENST00000554731 LRP6O75581 1613 aa18.93■□□□□ 0.62
RDH11-207ENST00000554731 METP08581 1390 aa18.93■□□□□ 0.62
RDH11-207ENST00000554731 ZNF772Q68DY9 489 aaPredicted RBP18.91■□□□□ 0.62
RDH11-207ENST00000554731 RRBP1Q9P2E9 1410 aaKnown RBP18.91■□□□□ 0.62
RDH11-207ENST00000554731 SHPRHQ149N8 1683 aa18.9■□□□□ 0.62
RDH11-207ENST00000554731 CLTCL1P53675 1640 aa18.89■□□□□ 0.62
RDH11-207ENST00000554731 MST1RQ04912 1400 aa18.89■□□□□ 0.61
RDH11-207ENST00000554731 NAIPQ13075 1403 aa18.89■□□□□ 0.61
RDH11-207ENST00000554731 NEXMIFQ5QGS0 1516 aa18.89■□□□□ 0.61
RDH11-207ENST00000554731 ASXL1Q8IXJ9 1541 aa18.89■□□□□ 0.61
RDH11-207ENST00000554731 ADGRL3Q9HAR2 1447 aa18.88■□□□□ 0.61
RDH11-207ENST00000554731 NUTM2BA6NNL0 878 aaPredicted RBP18.87■□□□□ 0.61
RDH11-207ENST00000554731 NUTM2EB1AL46 878 aaPredicted RBP18.87■□□□□ 0.61
RDH11-207ENST00000554731 NUTM2AQ8IVF1 878 aaPredicted RBP18.87■□□□□ 0.61
RDH11-207ENST00000554731 SETD1AO15047 1707 aaKnown RBP18.86■□□□□ 0.61
RDH11-207ENST00000554731 SETD5Q9C0A6 1442 aa18.85■□□□□ 0.61
RDH11-207ENST00000554731 TRIM52Q96A61 297 aa18.85■□□□□ 0.61
RDH11-207ENST00000554731 VGFO15240 615 aaPredicted RBP18.84■□□□□ 0.61
RDH11-207ENST00000554731 LRRC59Q96AG4 307 aaKnown RBP18.84■□□□□ 0.61
RDH11-207ENST00000554731 KIF1BO60333 1816 aa18.84■□□□□ 0.61
RDH11-207ENST00000554731 NHSL1Q5SYE7 1610 aa18.82■□□□□ 0.6
RDH11-207ENST00000554731 RXRBP28702 533 aa18.81■□□□□ 0.6
RDH11-207ENST00000554731 HFM1A2PYH4 1435 aa18.81■□□□□ 0.6
RDH11-207ENST00000554731 RPGRIP1LQ68CZ1 1315 aa18.8■□□□□ 0.6
RDH11-207ENST00000554731 DDX17Q92841 729 aaKnown RBP18.8■□□□□ 0.6
RDH11-207ENST00000554731 SLC4A1APQ9BWU0 796 aaKnown RBP18.8■□□□□ 0.6
RDH11-207ENST00000554731 PTCH1Q13635 1447 aa18.8■□□□□ 0.6
RDH11-207ENST00000554731 NALCNQ8IZF0 1738 aa18.8■□□□□ 0.6
RDH11-207ENST00000554731 AFF2P51816 1311 aa18.79■□□□□ 0.6
RDH11-207ENST00000554731 C1orf167Q5SNV9 1468 aa18.78■□□□□ 0.6
RDH11-207ENST00000554731 PNPLA6Q8IY17 1366 aa18.78■□□□□ 0.6
RDH11-207ENST00000554731 ROBO2Q9HCK4 1378 aa18.78■□□□□ 0.6
RDH11-207ENST00000554731 UPF1Q92900 1129 aaKnown RBP eCLIP18.76■□□□□ 0.59
RDH11-207ENST00000554731 C8orf37Q96NL8 207 aa18.75■□□□□ 0.59
RDH11-207ENST00000554731 CDK12Q9NYV4 1490 aaPredicted RBP18.75■□□□□ 0.59
RDH11-207ENST00000554731 PRAG1Q86YV5 1406 aa18.74■□□□□ 0.59
RDH11-207ENST00000554731 ORAI2Q96SN7 254 aa18.72■□□□□ 0.59
RDH11-207ENST00000554731 QTRT2Q9H974 415 aaKnown RBP18.71■□□□□ 0.59
RDH11-207ENST00000554731 SOS2Q07890 1332 aaPredicted RBP18.71■□□□□ 0.59
RDH11-207ENST00000554731 PPLO60437 1756 aa18.7■□□□□ 0.58
RDH11-207ENST00000554731 ADAMTS2O95450 1211 aa18.7■□□□□ 0.58
RDH11-207ENST00000554731 FOXD1Q16676 465 aa18.7■□□□□ 0.58
RDH11-207ENST00000554731 LAMC1P11047 1609 aa18.7■□□□□ 0.58
RDH11-207ENST00000554731 RBM6P78332 1123 aaKnown RBP18.69■□□□□ 0.58
RDH11-207ENST00000554731 NGLY1Q96IV0 654 aa18.69■□□□□ 0.58
RDH11-207ENST00000554731 CCDC144AA2RUR9 1427 aa18.68■□□□□ 0.58
RDH11-207ENST00000554731 RGL3Q3MIN7 710 aa18.66■□□□□ 0.58
RDH11-207ENST00000554731 ADGRF5Q8IZF2 1346 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms