RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 NKTRP30414 1462 aaKnown RBP37.49■■■■□ 3.59
FOXA1-204ENST00000554607 RGS17Q9UGC6 210 aaPredicted RBP37.46■■■■□ 3.59
FOXA1-204ENST00000554607 RBM33Q96EV2 1170 aaKnown RBP37.45■■■■□ 3.59
FOXA1-204ENST00000554607 NWD1Q149M9 1564 aa37.45■■■■□ 3.59
FOXA1-204ENST00000554607 MSH6P52701 1360 aa37.42■■■■□ 3.58
FOXA1-204ENST00000554607 PPP1R15AO75807 674 aaPredicted RBP37.42■■■■□ 3.58
FOXA1-204ENST00000554607 PLEKHG1Q9ULL1 1385 aa37.42■■■■□ 3.58
FOXA1-204ENST00000554607 ROBO1Q9Y6N7 1651 aa37.41■■■■□ 3.58
FOXA1-204ENST00000554607 ZFYVE9O95405 1425 aa37.4■■■■□ 3.58
FOXA1-204ENST00000554607 RIMS2Q9UQ26 1411 aa37.38■■■■□ 3.57
FOXA1-204ENST00000554607 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.36■■■■□ 3.57
FOXA1-204ENST00000554607 SLAIN2Q9P270 581 aa37.36■■■■□ 3.57
FOXA1-204ENST00000554607 TBX22Q9Y458 520 aa37.34■■■■□ 3.57
FOXA1-204ENST00000554607 TMEM131LA2VDJ0 1609 aa37.32■■■■□ 3.57
FOXA1-204ENST00000554607 GCC2Q8IWJ2 1684 aa37.32■■■■□ 3.57
FOXA1-204ENST00000554607 MYO5BQ9ULV0 1848 aa37.32■■■■□ 3.56
FOXA1-204ENST00000554607 CHGAP10645 457 aaKnown RBP37.31■■■■□ 3.56
FOXA1-204ENST00000554607 CHD2O14647 1828 aaKnown RBP37.31■■■■□ 3.56
FOXA1-204ENST00000554607 UNC13BO14795 1591 aa37.29■■■■□ 3.56
FOXA1-204ENST00000554607 NCOA3Q9Y6Q9 1424 aa37.27■■■■□ 3.56
FOXA1-204ENST00000554607 ROCK1Q13464 1354 aa37.27■■■■□ 3.56
FOXA1-204ENST00000554607 POTEAQ6S8J7 498 aa37.24■■■■□ 3.55
FOXA1-204ENST00000554607 JCADQ9P266 1359 aa37.21■■■■□ 3.55
FOXA1-204ENST00000554607 PHLPP1O60346 1717 aa37.2■■■■□ 3.55
FOXA1-204ENST00000554607 C14orf37Q86TY3 774 aa37.2■■■■□ 3.55
FOXA1-204ENST00000554607 E9PCH4 1651 aa37.2■■■■□ 3.55
FOXA1-204ENST00000554607 PIK3R4Q99570 1358 aa37.19■■■■□ 3.54
FOXA1-204ENST00000554607 NUTM2DQ5VT03 806 aaPredicted RBP37.17■■■■□ 3.54
FOXA1-204ENST00000554607 ADAMTS13Q76LX8 1427 aa37.17■■■■□ 3.54
FOXA1-204ENST00000554607 DIP2AQ14689 1571 aa37.17■■■■□ 3.54
FOXA1-204ENST00000554607 IQGAP3Q86VI3 1631 aa37.16■■■■□ 3.54
FOXA1-204ENST00000554607 NUP155O75694 1391 aa37.15■■■■□ 3.54
FOXA1-204ENST00000554607 CADPS2Q86UW7 1296 aa37.14■■■■□ 3.54
FOXA1-204ENST00000554607 C19orf44Q9H6X5 657 aa37.14■■■■□ 3.54
FOXA1-204ENST00000554607 ATF3P18847 181 aa37.11■■■■□ 3.53
FOXA1-204ENST00000554607 COL16A1Q07092 1604 aaPredicted RBP37.06■■■■□ 3.52
FOXA1-204ENST00000554607 TRPM2O94759 1503 aa37.05■■■■□ 3.52
FOXA1-204ENST00000554607 ITGAEP38570 1179 aa37.05■■■■□ 3.52
FOXA1-204ENST00000554607 AMOTL2Q9Y2J4 779 aa37.05■■■■□ 3.52
FOXA1-204ENST00000554607 SPATA31A6Q5VVP1 1343 aa37.05■■■■□ 3.52
FOXA1-204ENST00000554607 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.04■■■■□ 3.52
FOXA1-204ENST00000554607 AHDC1Q5TGY3 1603 aaPredicted RBP36.97■■■■□ 3.51
FOXA1-204ENST00000554607 MEX3CQ5U5Q3 659 aaKnown RBP36.97■■■■□ 3.51
FOXA1-204ENST00000554607 PTPRUQ92729 1446 aa36.96■■■■□ 3.51
FOXA1-204ENST00000554607 ZNF772Q68DY9 489 aaPredicted RBP36.93■■■■□ 3.5
FOXA1-204ENST00000554607 ZNF326Q5BKZ1 582 aaKnown RBP36.92■■■■□ 3.5
FOXA1-204ENST00000554607 DCCP43146 1447 aa36.92■■■■□ 3.5
FOXA1-204ENST00000554607 BRINP3Q76B58 766 aa36.91■■■■□ 3.5
FOXA1-204ENST00000554607 LRP6O75581 1613 aa36.9■■■■□ 3.5
FOXA1-204ENST00000554607 SETBP1Q9Y6X0 1596 aa36.89■■■■□ 3.5
FOXA1-204ENST00000554607 SPHKAPQ2M3C7 1700 aa36.88■■■■□ 3.49
FOXA1-204ENST00000554607 SHPRHQ149N8 1683 aa36.88■■■■□ 3.49
FOXA1-204ENST00000554607 NRXN3Q9Y4C0 1643 aa36.85■■■■□ 3.49
FOXA1-204ENST00000554607 XRN1Q8IZH2 1706 aaKnown RBP36.84■■■■□ 3.49
FOXA1-204ENST00000554607 PPARGC1BQ86YN6 1023 aaKnown RBP36.83■■■■□ 3.49
FOXA1-204ENST00000554607 SETD1AO15047 1707 aaKnown RBP36.81■■■■□ 3.48
FOXA1-204ENST00000554607 METP08581 1390 aa36.8■■■■□ 3.48
FOXA1-204ENST00000554607 ASXL1Q8IXJ9 1541 aa36.78■■■■□ 3.48
FOXA1-204ENST00000554607 MST1RQ04912 1400 aa36.77■■■■□ 3.48
FOXA1-204ENST00000554607 NUTM2BA6NNL0 878 aaPredicted RBP36.76■■■■□ 3.48
FOXA1-204ENST00000554607 NUTM2EB1AL46 878 aaPredicted RBP36.76■■■■□ 3.48
FOXA1-204ENST00000554607 NUTM2AQ8IVF1 878 aaPredicted RBP36.76■■■■□ 3.48
FOXA1-204ENST00000554607 SETD5Q9C0A6 1442 aa36.75■■■■□ 3.47
FOXA1-204ENST00000554607 LRRC59Q96AG4 307 aaKnown RBP36.74■■■■□ 3.47
FOXA1-204ENST00000554607 RXRBP28702 533 aa36.73■■■■□ 3.47
FOXA1-204ENST00000554607 TRIM52Q96A61 297 aa36.73■■■■□ 3.47
FOXA1-204ENST00000554607 ADGRL3Q9HAR2 1447 aa36.71■■■■□ 3.47
FOXA1-204ENST00000554607 NEXMIFQ5QGS0 1516 aa36.7■■■■□ 3.47
FOXA1-204ENST00000554607 CLTCL1P53675 1640 aa36.7■■■■□ 3.47
FOXA1-204ENST00000554607 NHSL1Q5SYE7 1610 aa36.67■■■■□ 3.46
FOXA1-204ENST00000554607 UPF1Q92900 1129 aaKnown RBP eCLIP36.66■■■■□ 3.46
FOXA1-204ENST00000554607 KIF1BO60333 1816 aa36.65■■■■□ 3.46
FOXA1-204ENST00000554607 VGFO15240 615 aaPredicted RBP36.65■■■■□ 3.46
FOXA1-204ENST00000554607 AFF2P51816 1311 aa36.63■■■■□ 3.45
FOXA1-204ENST00000554607 NAIPQ13075 1403 aa36.63■■■■□ 3.45
FOXA1-204ENST00000554607 RRBP1Q9P2E9 1410 aaKnown RBP36.63■■■■□ 3.45
FOXA1-204ENST00000554607 CDK12Q9NYV4 1490 aaPredicted RBP36.61■■■■□ 3.45
FOXA1-204ENST00000554607 DDX17Q92841 729 aaKnown RBP36.58■■■■□ 3.45
FOXA1-204ENST00000554607 NALCNQ8IZF0 1738 aa36.58■■■■□ 3.45
FOXA1-204ENST00000554607 RPGRIP1LQ68CZ1 1315 aa36.57■■■■□ 3.44
FOXA1-204ENST00000554607 PNPLA6Q8IY17 1366 aa36.56■■■■□ 3.44
FOXA1-204ENST00000554607 PTCH1Q13635 1447 aa36.56■■■■□ 3.44
FOXA1-204ENST00000554607 C1orf167Q5SNV9 1468 aa36.56■■■■□ 3.44
FOXA1-204ENST00000554607 C8orf37Q96NL8 207 aa36.55■■■■□ 3.44
FOXA1-204ENST00000554607 QTRT2Q9H974 415 aaKnown RBP36.5■■■■□ 3.43
FOXA1-204ENST00000554607 RBM6P78332 1123 aaKnown RBP36.49■■■■□ 3.43
FOXA1-204ENST00000554607 SLC4A1APQ9BWU0 796 aaKnown RBP36.49■■■■□ 3.43
FOXA1-204ENST00000554607 ROBO2Q9HCK4 1378 aa36.49■■■■□ 3.43
FOXA1-204ENST00000554607 HFM1A2PYH4 1435 aa36.47■■■■□ 3.43
FOXA1-204ENST00000554607 PRAG1Q86YV5 1406 aa36.47■■■■□ 3.43
FOXA1-204ENST00000554607 SOS2Q07890 1332 aaPredicted RBP36.45■■■■□ 3.43
FOXA1-204ENST00000554607 NGLY1Q96IV0 654 aa36.45■■■■□ 3.43
FOXA1-204ENST00000554607 ORAI2Q96SN7 254 aa36.44■■■■□ 3.42
FOXA1-204ENST00000554607 LAMC1P11047 1609 aa36.44■■■■□ 3.42
FOXA1-204ENST00000554607 ADAMTS2O95450 1211 aa36.42■■■■□ 3.42
FOXA1-204ENST00000554607 RGS12O14924 1447 aa36.37■■■■□ 3.41
FOXA1-204ENST00000554607 PPLO60437 1756 aa36.36■■■■□ 3.41
FOXA1-204ENST00000554607 USP21Q9UK80 565 aa36.32■■■■□ 3.4
FOXA1-204ENST00000554607 TRPC5Q9UL62 973 aaPredicted RBP36.3■■■■□ 3.4
FOXA1-204ENST00000554607 NPHP3Q7Z494 1330 aa36.3■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms