RNA–Protein interactions for RNA: ENST00000554556.5

GABRB3-206, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-206ENST00000554556 ROCK1Q13464 1354 aa34.18■■■■□ 3.06
GABRB3-206ENST00000554556 UNC13BO14795 1591 aa34.18■■■■□ 3.06
GABRB3-206ENST00000554556 PPP1R15AO75807 674 aaPredicted RBP34.17■■■■□ 3.06
GABRB3-206ENST00000554556 FAM135BQ49AJ0 1406 aa34.17■■■■□ 3.06
GABRB3-206ENST00000554556 MYO5BQ9ULV0 1848 aa34.16■■■■□ 3.06
GABRB3-206ENST00000554556 NKTRP30414 1462 aaKnown RBP34.14■■■■□ 3.06
GABRB3-206ENST00000554556 ZFYVE9O95405 1425 aa34.13■■■■□ 3.05
GABRB3-206ENST00000554556 RIMS2Q9UQ26 1411 aa34.13■■■■□ 3.05
GABRB3-206ENST00000554556 PLEKHG1Q9ULL1 1385 aa34.13■■■■□ 3.05
GABRB3-206ENST00000554556 CHGAP10645 457 aaKnown RBP34.12■■■■□ 3.05
GABRB3-206ENST00000554556 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.12■■■■□ 3.05
GABRB3-206ENST00000554556 TMEM131LA2VDJ0 1609 aa34.12■■■■□ 3.05
GABRB3-206ENST00000554556 NWD1Q149M9 1564 aa34.11■■■■□ 3.05
GABRB3-206ENST00000554556 RBM33Q96EV2 1170 aaKnown RBP34.1■■■■□ 3.05
GABRB3-206ENST00000554556 E9PCH4 1651 aa34.08■■■■□ 3.05
GABRB3-206ENST00000554556 MSH6P52701 1360 aa34.07■■■■□ 3.04
GABRB3-206ENST00000554556 IQGAP3Q86VI3 1631 aa34.06■■■■□ 3.04
GABRB3-206ENST00000554556 ITGAEP38570 1179 aa34.06■■■■□ 3.04
GABRB3-206ENST00000554556 TBX22Q9Y458 520 aa34.06■■■■□ 3.04
GABRB3-206ENST00000554556 CHD2O14647 1828 aaKnown RBP34.06■■■■□ 3.04
GABRB3-206ENST00000554556 NUP155O75694 1391 aa34.04■■■■□ 3.04
GABRB3-206ENST00000554556 ROBO1Q9Y6N7 1651 aa34.02■■■■□ 3.04
GABRB3-206ENST00000554556 SLAIN2Q9P270 581 aa33.98■■■■□ 3.03
GABRB3-206ENST00000554556 NUTM2DQ5VT03 806 aaPredicted RBP33.95■■■■□ 3.03
GABRB3-206ENST00000554556 PPARGC1BQ86YN6 1023 aaKnown RBP33.95■■■■□ 3.03
GABRB3-206ENST00000554556 NCOA3Q9Y6Q9 1424 aa33.95■■■■□ 3.02
GABRB3-206ENST00000554556 PIK3R4Q99570 1358 aa33.92■■■■□ 3.02
GABRB3-206ENST00000554556 DIP2AQ14689 1571 aa33.92■■■■□ 3.02
GABRB3-206ENST00000554556 C14orf37Q86TY3 774 aa33.91■■■■□ 3.02
GABRB3-206ENST00000554556 ADAMTS13Q76LX8 1427 aa33.9■■■■□ 3.02
GABRB3-206ENST00000554556 RGS17Q9UGC6 210 aaPredicted RBP33.9■■■■□ 3.02
GABRB3-206ENST00000554556 PHLPP1O60346 1717 aa33.85■■■■□ 3.01
GABRB3-206ENST00000554556 CADPS2Q86UW7 1296 aa33.83■■■■□ 3.01
GABRB3-206ENST00000554556 C19orf44Q9H6X5 657 aa33.83■■■■□ 3.01
GABRB3-206ENST00000554556 TRPM2O94759 1503 aa33.83■■■■□ 3.01
GABRB3-206ENST00000554556 SPHKAPQ2M3C7 1700 aa33.82■■■■□ 3
GABRB3-206ENST00000554556 ATF3P18847 181 aa33.81■■■■□ 3
GABRB3-206ENST00000554556 AMOTL2Q9Y2J4 779 aa33.8■■■■□ 3
GABRB3-206ENST00000554556 ZNF326Q5BKZ1 582 aaKnown RBP33.79■■■■□ 3
GABRB3-206ENST00000554556 JCADQ9P266 1359 aa33.79■■■■□ 3
GABRB3-206ENST00000554556 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.77■■■■□ 3
GABRB3-206ENST00000554556 POTEAQ6S8J7 498 aa33.72■■■□□ 2.99
GABRB3-206ENST00000554556 PTPRUQ92729 1446 aa33.71■■■□□ 2.99
GABRB3-206ENST00000554556 RRBP1Q9P2E9 1410 aaKnown RBP33.71■■■□□ 2.99
GABRB3-206ENST00000554556 SETBP1Q9Y6X0 1596 aa33.7■■■□□ 2.99
GABRB3-206ENST00000554556 COL16A1Q07092 1604 aaPredicted RBP33.69■■■□□ 2.98
GABRB3-206ENST00000554556 NRXN3Q9Y4C0 1643 aa33.66■■■□□ 2.98
GABRB3-206ENST00000554556 NAIPQ13075 1403 aa33.65■■■□□ 2.98
GABRB3-206ENST00000554556 SPATA31A6Q5VVP1 1343 aa33.65■■■□□ 2.98
GABRB3-206ENST00000554556 AHDC1Q5TGY3 1603 aaPredicted RBP33.64■■■□□ 2.98
GABRB3-206ENST00000554556 DCCP43146 1447 aa33.63■■■□□ 2.97
GABRB3-206ENST00000554556 KIF1BO60333 1816 aa33.63■■■□□ 2.97
GABRB3-206ENST00000554556 XRN1Q8IZH2 1706 aaKnown RBP33.62■■■□□ 2.97
GABRB3-206ENST00000554556 CLTCL1P53675 1640 aa33.62■■■□□ 2.97
GABRB3-206ENST00000554556 TRIM52Q96A61 297 aa33.6■■■□□ 2.97
GABRB3-206ENST00000554556 METP08581 1390 aa33.6■■■□□ 2.97
GABRB3-206ENST00000554556 BRINP3Q76B58 766 aa33.59■■■□□ 2.97
GABRB3-206ENST00000554556 MEX3CQ5U5Q3 659 aaKnown RBP33.58■■■□□ 2.97
GABRB3-206ENST00000554556 NEXMIFQ5QGS0 1516 aa33.58■■■□□ 2.97
GABRB3-206ENST00000554556 SHPRHQ149N8 1683 aa33.55■■■□□ 2.96
GABRB3-206ENST00000554556 VGFO15240 615 aaPredicted RBP33.53■■■□□ 2.96
GABRB3-206ENST00000554556 HFM1A2PYH4 1435 aa33.51■■■□□ 2.95
GABRB3-206ENST00000554556 ZNF772Q68DY9 489 aaPredicted RBP33.5■■■□□ 2.95
GABRB3-206ENST00000554556 SLC4A1APQ9BWU0 796 aaKnown RBP33.5■■■□□ 2.95
GABRB3-206ENST00000554556 LRP6O75581 1613 aa33.5■■■□□ 2.95
GABRB3-206ENST00000554556 MST1RQ04912 1400 aa33.49■■■□□ 2.95
GABRB3-206ENST00000554556 ASXL1Q8IXJ9 1541 aa33.48■■■□□ 2.95
GABRB3-206ENST00000554556 ADGRL3Q9HAR2 1447 aa33.47■■■□□ 2.95
GABRB3-206ENST00000554556 RPGRIP1LQ68CZ1 1315 aa33.47■■■□□ 2.95
GABRB3-206ENST00000554556 LRRC59Q96AG4 307 aaKnown RBP33.44■■■□□ 2.94
GABRB3-206ENST00000554556 SETD5Q9C0A6 1442 aa33.43■■■□□ 2.94
GABRB3-206ENST00000554556 NUTM2BA6NNL0 878 aaPredicted RBP33.42■■■□□ 2.94
GABRB3-206ENST00000554556 NUTM2EB1AL46 878 aaPredicted RBP33.42■■■□□ 2.94
GABRB3-206ENST00000554556 NUTM2AQ8IVF1 878 aaPredicted RBP33.42■■■□□ 2.94
GABRB3-206ENST00000554556 NHSL1Q5SYE7 1610 aa33.42■■■□□ 2.94
GABRB3-206ENST00000554556 NALCNQ8IZF0 1738 aa33.39■■■□□ 2.94
GABRB3-206ENST00000554556 PTCH1Q13635 1447 aa33.36■■■□□ 2.93
GABRB3-206ENST00000554556 SETD1AO15047 1707 aaKnown RBP33.36■■■□□ 2.93
GABRB3-206ENST00000554556 PPLO60437 1756 aa33.34■■■□□ 2.93
GABRB3-206ENST00000554556 RXRBP28702 533 aa33.32■■■□□ 2.92
GABRB3-206ENST00000554556 C1orf167Q5SNV9 1468 aa33.31■■■□□ 2.92
GABRB3-206ENST00000554556 DDX17Q92841 729 aaKnown RBP33.31■■■□□ 2.92
GABRB3-206ENST00000554556 ROBO2Q9HCK4 1378 aa33.31■■■□□ 2.92
GABRB3-206ENST00000554556 PRAG1Q86YV5 1406 aa33.28■■■□□ 2.92
GABRB3-206ENST00000554556 AFF2P51816 1311 aa33.28■■■□□ 2.92
GABRB3-206ENST00000554556 PNPLA6Q8IY17 1366 aa33.27■■■□□ 2.92
GABRB3-206ENST00000554556 FOXD1Q16676 465 aa33.27■■■□□ 2.92
GABRB3-206ENST00000554556 CCDC144AA2RUR9 1427 aa33.24■■■□□ 2.91
GABRB3-206ENST00000554556 C8orf37Q96NL8 207 aa33.22■■■□□ 2.91
GABRB3-206ENST00000554556 ORAI2Q96SN7 254 aa33.22■■■□□ 2.91
GABRB3-206ENST00000554556 MPHOSPH9Q99550 1183 aa33.21■■■□□ 2.91
GABRB3-206ENST00000554556 LAMC1P11047 1609 aa33.2■■■□□ 2.91
GABRB3-206ENST00000554556 RGL3Q3MIN7 710 aa33.2■■■□□ 2.91
GABRB3-206ENST00000554556 CDK12Q9NYV4 1490 aaPredicted RBP33.19■■■□□ 2.9
GABRB3-206ENST00000554556 SOS2Q07890 1332 aaPredicted RBP33.19■■■□□ 2.9
GABRB3-206ENST00000554556 UPF1Q92900 1129 aaKnown RBP eCLIP33.17■■■□□ 2.9
GABRB3-206ENST00000554556 ADGRF5Q8IZF2 1346 aa33.17■■■□□ 2.9
GABRB3-206ENST00000554556 ACIN1Q9UKV3 1341 aaKnown RBP33.17■■■□□ 2.9
GABRB3-206ENST00000554556 ANKRD30BQ9BXX2 1392 aa33.17■■■□□ 2.9
GABRB3-206ENST00000554556 QTRT2Q9H974 415 aaKnown RBP33.16■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms