RNA–Protein interactions for RNA: ENST00000554456.1

PSMA3-206, Transcript of proteasome subunit alpha 3, humanhuman

TSL 2

Gene PSMA3, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-206ENST00000554456 RIMS2Q9UQ26 1411 aa23.16■■□□□ 1.3
PSMA3-206ENST00000554456 CHGAP10645 457 aaKnown RBP23.16■■□□□ 1.3
PSMA3-206ENST00000554456 SLC26A8Q96RN1 970 aa23.15■■□□□ 1.3
PSMA3-206ENST00000554456 TOM1O60784 492 aa23.14■■□□□ 1.29
PSMA3-206ENST00000554456 NWD1Q149M9 1564 aa23.12■■□□□ 1.29
PSMA3-206ENST00000554456 BCANQ96GW7 911 aa23.12■■□□□ 1.29
PSMA3-206ENST00000554456 HFM1A2PYH4 1435 aa23.11■■□□□ 1.29
PSMA3-206ENST00000554456 PPP1R15AO75807 674 aaPredicted RBP23.11■■□□□ 1.29
PSMA3-206ENST00000554456 PLEKHG1Q9ULL1 1385 aa23.1■■□□□ 1.29
PSMA3-206ENST00000554456 CLTCL1P53675 1640 aa23.09■■□□□ 1.29
PSMA3-206ENST00000554456 DISP3Q9P2K9 1392 aa23.09■■□□□ 1.29
PSMA3-206ENST00000554456 NUTM2DQ5VT03 806 aaPredicted RBP23.08■■□□□ 1.29
PSMA3-206ENST00000554456 HSPA1LP34931 641 aa23.07■■□□□ 1.28
PSMA3-206ENST00000554456 CHD2O14647 1828 aaKnown RBP23.07■■□□□ 1.28
PSMA3-206ENST00000554456 TRPM2O94759 1503 aa23.06■■□□□ 1.28
PSMA3-206ENST00000554456 NKTRP30414 1462 aaKnown RBP23.05■■□□□ 1.28
PSMA3-206ENST00000554456 TMEM94Q12767 1356 aa23.04■■□□□ 1.28
PSMA3-206ENST00000554456 KCNA6P17658 529 aa23.04■■□□□ 1.28
PSMA3-206ENST00000554456 RBM33Q96EV2 1170 aaKnown RBP23.03■■□□□ 1.28
PSMA3-206ENST00000554456 DIP2AQ14689 1571 aa23.02■■□□□ 1.28
PSMA3-206ENST00000554456 HDGFP51858 240 aaKnown RBP23.02■■□□□ 1.28
PSMA3-206ENST00000554456 KIF1BO60333 1816 aa23.02■■□□□ 1.28
PSMA3-206ENST00000554456 ADAMTS13Q76LX8 1427 aa23.01■■□□□ 1.27
PSMA3-206ENST00000554456 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.01■■□□□ 1.27
PSMA3-206ENST00000554456 TRIM52Q96A61 297 aa23.01■■□□□ 1.27
PSMA3-206ENST00000554456 NRXN3Q9Y4C0 1643 aa23■■□□□ 1.27
PSMA3-206ENST00000554456 PROSER2Q86WR7 435 aaPredicted RBP22.99■■□□□ 1.27
PSMA3-206ENST00000554456 ZNF326Q5BKZ1 582 aaKnown RBP22.96■■□□□ 1.27
PSMA3-206ENST00000554456 NEXMIFQ5QGS0 1516 aa22.96■■□□□ 1.27
PSMA3-206ENST00000554456 MED1Q15648 1581 aaPredicted RBP22.96■■□□□ 1.27
PSMA3-206ENST00000554456 SETBP1Q9Y6X0 1596 aa22.94■■□□□ 1.26
PSMA3-206ENST00000554456 TBX22Q9Y458 520 aa22.94■■□□□ 1.26
PSMA3-206ENST00000554456 ROBO1Q9Y6N7 1651 aa22.93■■□□□ 1.26
PSMA3-206ENST00000554456 SLC4A1APQ9BWU0 796 aaKnown RBP22.93■■□□□ 1.26
PSMA3-206ENST00000554456 ILDR2Q71H61 639 aa22.91■■□□□ 1.26
PSMA3-206ENST00000554456 XRN1Q8IZH2 1706 aaKnown RBP22.9■■□□□ 1.26
PSMA3-206ENST00000554456 MSH6P52701 1360 aa22.89■■□□□ 1.26
PSMA3-206ENST00000554456 PTPRUQ92729 1446 aa22.89■■□□□ 1.25
PSMA3-206ENST00000554456 FOXD1Q16676 465 aa22.88■■□□□ 1.25
PSMA3-206ENST00000554456 PIK3R4Q99570 1358 aa22.88■■□□□ 1.25
PSMA3-206ENST00000554456 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.86■■□□□ 1.25
PSMA3-206ENST00000554456 PPLO60437 1756 aa22.86■■□□□ 1.25
PSMA3-206ENST00000554456 FAM135BQ49AJ0 1406 aa22.85■■□□□ 1.25
PSMA3-206ENST00000554456 SETD1AO15047 1707 aaKnown RBP22.84■■□□□ 1.25
PSMA3-206ENST00000554456 C14orf37Q86TY3 774 aa22.83■■□□□ 1.25
PSMA3-206ENST00000554456 METP08581 1390 aa22.82■■□□□ 1.24
PSMA3-206ENST00000554456 AMOTL2Q9Y2J4 779 aa22.82■■□□□ 1.24
PSMA3-206ENST00000554456 PHLPP1O60346 1717 aa22.8■■□□□ 1.24
PSMA3-206ENST00000554456 NCOA3Q9Y6Q9 1424 aa22.8■■□□□ 1.24
PSMA3-206ENST00000554456 SETD5Q9C0A6 1442 aa22.79■■□□□ 1.24
PSMA3-206ENST00000554456 CCDC144AA2RUR9 1427 aa22.78■■□□□ 1.24
PSMA3-206ENST00000554456 MPHOSPH9Q99550 1183 aa22.78■■□□□ 1.24
PSMA3-206ENST00000554456 IFT172Q9UG01 1749 aa22.77■■□□□ 1.24
PSMA3-206ENST00000554456 SLAIN2Q9P270 581 aa22.77■■□□□ 1.24
PSMA3-206ENST00000554456 NALCNQ8IZF0 1738 aa22.77■■□□□ 1.23
PSMA3-206ENST00000554456 RAB3GAP2Q9H2M9 1393 aa22.74■■□□□ 1.23
PSMA3-206ENST00000554456 VGFO15240 615 aaPredicted RBP22.72■■□□□ 1.23
PSMA3-206ENST00000554456 C19orf44Q9H6X5 657 aa22.72■■□□□ 1.23
PSMA3-206ENST00000554456 SPATA31E1Q6ZUB1 1445 aa22.72■■□□□ 1.23
PSMA3-206ENST00000554456 COL16A1Q07092 1604 aaPredicted RBP22.71■■□□□ 1.23
PSMA3-206ENST00000554456 ATF3P18847 181 aa22.71■■□□□ 1.23
PSMA3-206ENST00000554456 PHF23Q9BUL5 403 aaPredicted RBP22.71■■□□□ 1.23
PSMA3-206ENST00000554456 RPGRIP1LQ68CZ1 1315 aa22.71■■□□□ 1.23
PSMA3-206ENST00000554456 CADPS2Q86UW7 1296 aa22.7■■□□□ 1.22
PSMA3-206ENST00000554456 DCCP43146 1447 aa22.69■■□□□ 1.22
PSMA3-206ENST00000554456 ADGRL3Q9HAR2 1447 aa22.68■■□□□ 1.22
PSMA3-206ENST00000554456 RGL3Q3MIN7 710 aa22.68■■□□□ 1.22
PSMA3-206ENST00000554456 AHDC1Q5TGY3 1603 aaPredicted RBP22.68■■□□□ 1.22
PSMA3-206ENST00000554456 PTCH1Q13635 1447 aa22.66■■□□□ 1.22
PSMA3-206ENST00000554456 SOCS7O14512 581 aa22.66■■□□□ 1.22
PSMA3-206ENST00000554456 MST1RQ04912 1400 aa22.65■■□□□ 1.22
PSMA3-206ENST00000554456 ADGRF5Q8IZF2 1346 aa22.64■■□□□ 1.22
PSMA3-206ENST00000554456 ASXL1Q8IXJ9 1541 aa22.64■■□□□ 1.21
PSMA3-206ENST00000554456 ROBO2Q9HCK4 1378 aa22.63■■□□□ 1.21
PSMA3-206ENST00000554456 NHSL1Q5SYE7 1610 aa22.62■■□□□ 1.21
PSMA3-206ENST00000554456 ACIN1Q9UKV3 1341 aaKnown RBP22.61■■□□□ 1.21
PSMA3-206ENST00000554456 BRINP3Q76B58 766 aa22.61■■□□□ 1.21
PSMA3-206ENST00000554456 PRAG1Q86YV5 1406 aa22.61■■□□□ 1.21
PSMA3-206ENST00000554456 ANKRD30BQ9BXX2 1392 aa22.61■■□□□ 1.21
PSMA3-206ENST00000554456 JCADQ9P266 1359 aa22.6■■□□□ 1.21
PSMA3-206ENST00000554456 SHPRHQ149N8 1683 aa22.59■■□□□ 1.21
PSMA3-206ENST00000554456 PIK3C2GO75747 1445 aa22.58■■□□□ 1.21
PSMA3-206ENST00000554456 KNDC1Q76NI1 1749 aa22.57■■□□□ 1.2
PSMA3-206ENST00000554456 RGS17Q9UGC6 210 aaPredicted RBP22.55■■□□□ 1.2
PSMA3-206ENST00000554456 LRP6O75581 1613 aa22.54■■□□□ 1.2
PSMA3-206ENST00000554456 MYOM2P54296 1465 aa22.54■■□□□ 1.2
PSMA3-206ENST00000554456 LAMC1P11047 1609 aa22.53■■□□□ 1.2
PSMA3-206ENST00000554456 C1orf167Q5SNV9 1468 aa22.53■■□□□ 1.2
PSMA3-206ENST00000554456 CDC42BPGQ6DT37 1551 aa22.52■■□□□ 1.2
PSMA3-206ENST00000554456 STK26Q9P289 416 aa22.52■■□□□ 1.2
PSMA3-206ENST00000554456 TMEM132EQ6IEE7 984 aa22.51■■□□□ 1.19
PSMA3-206ENST00000554456 NRXN1Q9ULB1 1477 aa22.51■■□□□ 1.19
PSMA3-206ENST00000554456 TECPR2O15040 1411 aa22.5■■□□□ 1.19
PSMA3-206ENST00000554456 DDX17Q92841 729 aaKnown RBP22.5■■□□□ 1.19
PSMA3-206ENST00000554456 LRPPRCP42704 1394 aaKnown RBP22.5■■□□□ 1.19
PSMA3-206ENST00000554456 YTHDC2Q9H6S0 1430 aaKnown RBP22.48■■□□□ 1.19
PSMA3-206ENST00000554456 SPATA31A6Q5VVP1 1343 aa22.47■■□□□ 1.19
PSMA3-206ENST00000554456 PLEKHH1Q9ULM0 1364 aa22.47■■□□□ 1.19
PSMA3-206ENST00000554456 WAPLQ7Z5K2 1190 aa22.46■■□□□ 1.19
PSMA3-206ENST00000554456 POTEAQ6S8J7 498 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms