RNA–Protein interactions for RNA: ENST00000554289.1

LIN52-203, Transcript of lin-52 DREAM MuvB core complex component, humanhuman

TSL 3

Gene LIN52, Length 271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN52-203ENST00000554289 NAIPQ13075 1403 aa13.39□□□□□ -0.27
LIN52-203ENST00000554289 RIMS2Q9UQ26 1411 aa13.39□□□□□ -0.27
LIN52-203ENST00000554289 PLEKHG1Q9ULL1 1385 aa13.38□□□□□ -0.27
LIN52-203ENST00000554289 CHGAP10645 457 aaKnown RBP13.38□□□□□ -0.27
LIN52-203ENST00000554289 PIP4K2BP78356 416 aa13.38□□□□□ -0.27
LIN52-203ENST00000554289 BCANQ96GW7 911 aa13.38□□□□□ -0.27
LIN52-203ENST00000554289 SLC26A8Q96RN1 970 aa13.38□□□□□ -0.27
LIN52-203ENST00000554289 XIRP1Q702N8 1843 aaKnown RBP13.38□□□□□ -0.27
LIN52-203ENST00000554289 SPHKAPQ2M3C7 1700 aa13.38□□□□□ -0.27
LIN52-203ENST00000554289 SCAF1Q9H7N4 1312 aaKnown RBP13.38□□□□□ -0.27
LIN52-203ENST00000554289 PPP1R15AO75807 674 aaPredicted RBP13.37□□□□□ -0.27
LIN52-203ENST00000554289 ALKQ9UM73 1620 aa13.36□□□□□ -0.27
LIN52-203ENST00000554289 HFM1A2PYH4 1435 aa13.36□□□□□ -0.27
LIN52-203ENST00000554289 CHD2O14647 1828 aaKnown RBP13.36□□□□□ -0.27
LIN52-203ENST00000554289 TBX22Q9Y458 520 aa13.35□□□□□ -0.27
LIN52-203ENST00000554289 NWD1Q149M9 1564 aa13.34□□□□□ -0.27
LIN52-203ENST00000554289 HSPA1LP34931 641 aa13.34□□□□□ -0.27
LIN52-203ENST00000554289 NKTRP30414 1462 aaKnown RBP13.34□□□□□ -0.27
LIN52-203ENST00000554289 PROSER2Q86WR7 435 aaPredicted RBP13.33□□□□□ -0.28
LIN52-203ENST00000554289 DIP2AQ14689 1571 aa13.32□□□□□ -0.28
LIN52-203ENST00000554289 TRIM52Q96A61 297 aa13.32□□□□□ -0.28
LIN52-203ENST00000554289 KIF1BO60333 1816 aa13.32□□□□□ -0.28
LIN52-203ENST00000554289 TMEM94Q12767 1356 aa13.32□□□□□ -0.28
LIN52-203ENST00000554289 PIK3R4Q99570 1358 aa13.32□□□□□ -0.28
LIN52-203ENST00000554289 TRPM2O94759 1503 aa13.3□□□□□ -0.28
LIN52-203ENST00000554289 ADAMTS13Q76LX8 1427 aa13.3□□□□□ -0.28
LIN52-203ENST00000554289 NUTM2DQ5VT03 806 aaPredicted RBP13.29□□□□□ -0.28
LIN52-203ENST00000554289 ACIN1Q9UKV3 1341 aaKnown RBP13.29□□□□□ -0.28
LIN52-203ENST00000554289 NCOA3Q9Y6Q9 1424 aa13.29□□□□□ -0.28
LIN52-203ENST00000554289 CLTCL1P53675 1640 aa13.28□□□□□ -0.28
LIN52-203ENST00000554289 ZNF326Q5BKZ1 582 aaKnown RBP13.28□□□□□ -0.28
LIN52-203ENST00000554289 SLC4A1APQ9BWU0 796 aaKnown RBP13.28□□□□□ -0.28
LIN52-203ENST00000554289 FAM135BQ49AJ0 1406 aa13.28□□□□□ -0.28
LIN52-203ENST00000554289 SENP3Q9H4L4 574 aaPredicted RBP13.27□□□□□ -0.29
LIN52-203ENST00000554289 MSH6P52701 1360 aa13.27□□□□□ -0.29
LIN52-203ENST00000554289 SETBP1Q9Y6X0 1596 aa13.26□□□□□ -0.29
LIN52-203ENST00000554289 RBM33Q96EV2 1170 aaKnown RBP13.24□□□□□ -0.29
LIN52-203ENST00000554289 NRXN3Q9Y4C0 1643 aa13.24□□□□□ -0.29
LIN52-203ENST00000554289 NEXMIFQ5QGS0 1516 aa13.23□□□□□ -0.29
LIN52-203ENST00000554289 AMOTL2Q9Y2J4 779 aa13.23□□□□□ -0.29
LIN52-203ENST00000554289 MED1Q15648 1581 aaPredicted RBP13.23□□□□□ -0.29
LIN52-203ENST00000554289 ROBO1Q9Y6N7 1651 aa13.22□□□□□ -0.29
LIN52-203ENST00000554289 RPGRIP1LQ68CZ1 1315 aa13.22□□□□□ -0.29
LIN52-203ENST00000554289 VGFO15240 615 aaPredicted RBP13.22□□□□□ -0.29
LIN52-203ENST00000554289 SLAIN2Q9P270 581 aa13.22□□□□□ -0.29
LIN52-203ENST00000554289 C19orf44Q9H6X5 657 aa13.21□□□□□ -0.29
LIN52-203ENST00000554289 PTPRUQ92729 1446 aa13.21□□□□□ -0.3
LIN52-203ENST00000554289 XRN1Q8IZH2 1706 aaKnown RBP13.2□□□□□ -0.3
LIN52-203ENST00000554289 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.2□□□□□ -0.3
LIN52-203ENST00000554289 C14orf37Q86TY3 774 aa13.2□□□□□ -0.3
LIN52-203ENST00000554289 CADPS2Q86UW7 1296 aa13.2□□□□□ -0.3
LIN52-203ENST00000554289 MPHOSPH9Q99550 1183 aa13.2□□□□□ -0.3
LIN52-203ENST00000554289 PPLO60437 1756 aa13.19□□□□□ -0.3
LIN52-203ENST00000554289 ATF3P18847 181 aa13.18□□□□□ -0.3
LIN52-203ENST00000554289 SETD5Q9C0A6 1442 aa13.18□□□□□ -0.3
LIN52-203ENST00000554289 CCDC144AA2RUR9 1427 aa13.17□□□□□ -0.3
LIN52-203ENST00000554289 METP08581 1390 aa13.17□□□□□ -0.3
LIN52-203ENST00000554289 DCCP43146 1447 aa13.16□□□□□ -0.3
LIN52-203ENST00000554289 FOXD1Q16676 465 aa13.16□□□□□ -0.3
LIN52-203ENST00000554289 PHF23Q9BUL5 403 aaPredicted RBP13.16□□□□□ -0.3
LIN52-203ENST00000554289 PHLPP1O60346 1717 aa13.16□□□□□ -0.3
LIN52-203ENST00000554289 SETD1AO15047 1707 aaKnown RBP13.15□□□□□ -0.3
LIN52-203ENST00000554289 IFT172Q9UG01 1749 aa13.13□□□□□ -0.31
LIN52-203ENST00000554289 ANKRD30BQ9BXX2 1392 aa13.12□□□□□ -0.31
LIN52-203ENST00000554289 SPATA31E1Q6ZUB1 1445 aa13.12□□□□□ -0.31
LIN52-203ENST00000554289 PRAG1Q86YV5 1406 aa13.12□□□□□ -0.31
LIN52-203ENST00000554289 PTCH1Q13635 1447 aa13.11□□□□□ -0.31
LIN52-203ENST00000554289 ADGRL3Q9HAR2 1447 aa13.11□□□□□ -0.31
LIN52-203ENST00000554289 COL16A1Q07092 1604 aaPredicted RBP13.1□□□□□ -0.31
LIN52-203ENST00000554289 AHDC1Q5TGY3 1603 aaPredicted RBP13.1□□□□□ -0.31
LIN52-203ENST00000554289 RAB3GAP2Q9H2M9 1393 aa13.1□□□□□ -0.31
LIN52-203ENST00000554289 JCADQ9P266 1359 aa13.1□□□□□ -0.31
LIN52-203ENST00000554289 HRCP23327 699 aa13.1□□□□□ -0.31
LIN52-203ENST00000554289 RGL3Q3MIN7 710 aa13.1□□□□□ -0.31
LIN52-203ENST00000554289 BRINP3Q76B58 766 aa13.09□□□□□ -0.31
LIN52-203ENST00000554289 NALCNQ8IZF0 1738 aa13.09□□□□□ -0.31
LIN52-203ENST00000554289 MST1RQ04912 1400 aa13.08□□□□□ -0.32
LIN52-203ENST00000554289 ADGRF5Q8IZF2 1346 aa13.08□□□□□ -0.32
LIN52-203ENST00000554289 ROBO2Q9HCK4 1378 aa13.07□□□□□ -0.32
LIN52-203ENST00000554289 SHPRHQ149N8 1683 aa13.06□□□□□ -0.32
LIN52-203ENST00000554289 ASXL1Q8IXJ9 1541 aa13.06□□□□□ -0.32
LIN52-203ENST00000554289 SPATA31A6Q5VVP1 1343 aa13.06□□□□□ -0.32
LIN52-203ENST00000554289 NHSL1Q5SYE7 1610 aa13.06□□□□□ -0.32
LIN52-203ENST00000554289 PIK3C2GO75747 1445 aa13.05□□□□□ -0.32
LIN52-203ENST00000554289 RGS17Q9UGC6 210 aaPredicted RBP13.04□□□□□ -0.32
LIN52-203ENST00000554289 KNDC1Q76NI1 1749 aa13.03□□□□□ -0.32
LIN52-203ENST00000554289 LRRC59Q96AG4 307 aaKnown RBP13.03□□□□□ -0.32
LIN52-203ENST00000554289 LRPPRCP42704 1394 aaKnown RBP13.03□□□□□ -0.32
LIN52-203ENST00000554289 ABCC11Q96J66 1382 aa13.03□□□□□ -0.32
LIN52-203ENST00000554289 TECPR2O15040 1411 aa13.03□□□□□ -0.32
LIN52-203ENST00000554289 MYOM2P54296 1465 aa13.03□□□□□ -0.32
LIN52-203ENST00000554289 C1orf167Q5SNV9 1468 aa13.03□□□□□ -0.32
LIN52-203ENST00000554289 LAMC1P11047 1609 aa13.02□□□□□ -0.32
LIN52-203ENST00000554289 SIRT1Q96EB6 747 aa13.02□□□□□ -0.33
LIN52-203ENST00000554289 C14orf93Q9H972 538 aaKnown RBP13.02□□□□□ -0.33
LIN52-203ENST00000554289 STAC3Q96MF2 364 aa13.01□□□□□ -0.33
LIN52-203ENST00000554289 NRXN1Q9ULB1 1477 aa13.01□□□□□ -0.33
LIN52-203ENST00000554289 CDC42BPGQ6DT37 1551 aa13□□□□□ -0.33
LIN52-203ENST00000554289 TMEM132EQ6IEE7 984 aa13□□□□□ -0.33
LIN52-203ENST00000554289 STK26Q9P289 416 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms