RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 CHD2O14647 1828 aaKnown RBP18.09■□□□□ 0.49
TUBB3-204ENST00000554116 SLC52A1Q9NWF4 448 aa18.09■□□□□ 0.49
TUBB3-204ENST00000554116 NKTRP30414 1462 aaKnown RBP18.08■□□□□ 0.49
TUBB3-204ENST00000554116 TMEM131LA2VDJ0 1609 aa18.08■□□□□ 0.48
TUBB3-204ENST00000554116 GCC2Q8IWJ2 1684 aa18.07■□□□□ 0.48
TUBB3-204ENST00000554116 APLP2Q06481 763 aa18.07■□□□□ 0.48
TUBB3-204ENST00000554116 RPRD2Q5VT52 1461 aaKnown RBP18.07■□□□□ 0.48
TUBB3-204ENST00000554116 ANKRD50Q9ULJ7 1429 aa18.06■□□□□ 0.48
TUBB3-204ENST00000554116 PLEKHG1Q9ULL1 1385 aa18.04■□□□□ 0.48
TUBB3-204ENST00000554116 RIMS2Q9UQ26 1411 aa18.03■□□□□ 0.48
TUBB3-204ENST00000554116 UNC13BO14795 1591 aa18.02■□□□□ 0.48
TUBB3-204ENST00000554116 SLAIN2Q9P270 581 aa18.02■□□□□ 0.48
TUBB3-204ENST00000554116 E9PCH4 1651 aa18.02■□□□□ 0.47
TUBB3-204ENST00000554116 ADAMTS13Q76LX8 1427 aa18.01■□□□□ 0.47
TUBB3-204ENST00000554116 FAM50AQ14320 339 aaKnown RBP18.01■□□□□ 0.47
TUBB3-204ENST00000554116 PHLPP1O60346 1717 aa18.01■□□□□ 0.47
TUBB3-204ENST00000554116 COL16A1Q07092 1604 aaPredicted RBP17.99■□□□□ 0.47
TUBB3-204ENST00000554116 TBX22Q9Y458 520 aa17.99■□□□□ 0.47
TUBB3-204ENST00000554116 MSH6P52701 1360 aa17.99■□□□□ 0.47
TUBB3-204ENST00000554116 NUTM2DQ5VT03 806 aaPredicted RBP17.96■□□□□ 0.47
TUBB3-204ENST00000554116 BCANQ96GW7 911 aa17.96■□□□□ 0.47
TUBB3-204ENST00000554116 SETD1AO15047 1707 aaKnown RBP17.95■□□□□ 0.46
TUBB3-204ENST00000554116 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.95■□□□□ 0.46
TUBB3-204ENST00000554116 IQGAP3Q86VI3 1631 aa17.95■□□□□ 0.46
TUBB3-204ENST00000554116 PTPRUQ92729 1446 aa17.95■□□□□ 0.46
TUBB3-204ENST00000554116 LRP6O75581 1613 aa17.94■□□□□ 0.46
TUBB3-204ENST00000554116 NCOA3Q9Y6Q9 1424 aa17.94■□□□□ 0.46
TUBB3-204ENST00000554116 JCADQ9P266 1359 aa17.93■□□□□ 0.46
TUBB3-204ENST00000554116 PPP1R15AO75807 674 aaPredicted RBP17.92■□□□□ 0.46
TUBB3-204ENST00000554116 ROCK1Q13464 1354 aa17.91■□□□□ 0.46
TUBB3-204ENST00000554116 DIP2AQ14689 1571 aa17.91■□□□□ 0.46
TUBB3-204ENST00000554116 AHDC1Q5TGY3 1603 aaPredicted RBP17.9■□□□□ 0.46
TUBB3-204ENST00000554116 NRXN3Q9Y4C0 1643 aa17.9■□□□□ 0.46
TUBB3-204ENST00000554116 CHGAP10645 457 aaKnown RBP17.9■□□□□ 0.46
TUBB3-204ENST00000554116 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.9■□□□□ 0.46
TUBB3-204ENST00000554116 PIK3R4Q99570 1358 aa17.9■□□□□ 0.46
TUBB3-204ENST00000554116 HDGFP51858 240 aaKnown RBP17.89■□□□□ 0.45
TUBB3-204ENST00000554116 C19orf44Q9H6X5 657 aa17.88■□□□□ 0.45
TUBB3-204ENST00000554116 SRCAPQ6ZRS2 3230 aa17.87■□□□□ 0.45
TUBB3-204ENST00000554116 SHPRHQ149N8 1683 aa17.87■□□□□ 0.45
TUBB3-204ENST00000554116 AMOTL2Q9Y2J4 779 aa17.86■□□□□ 0.45
TUBB3-204ENST00000554116 NUP155O75694 1391 aa17.86■□□□□ 0.45
TUBB3-204ENST00000554116 XRN1Q8IZH2 1706 aaKnown RBP17.86■□□□□ 0.45
TUBB3-204ENST00000554116 TRPM2O94759 1503 aa17.85■□□□□ 0.45
TUBB3-204ENST00000554116 BRINP3Q76B58 766 aa17.84■□□□□ 0.45
TUBB3-204ENST00000554116 CADPS2Q86UW7 1296 aa17.84■□□□□ 0.45
TUBB3-204ENST00000554116 SETBP1Q9Y6X0 1596 aa17.83■□□□□ 0.45
TUBB3-204ENST00000554116 SPATA31A6Q5VVP1 1343 aa17.83■□□□□ 0.44
TUBB3-204ENST00000554116 SPHKAPQ2M3C7 1700 aa17.82■□□□□ 0.44
TUBB3-204ENST00000554116 METP08581 1390 aa17.81■□□□□ 0.44
TUBB3-204ENST00000554116 ATF3P18847 181 aa17.81■□□□□ 0.44
TUBB3-204ENST00000554116 ZNF772Q68DY9 489 aaPredicted RBP17.81■□□□□ 0.44
TUBB3-204ENST00000554116 C14orf37Q86TY3 774 aa17.81■□□□□ 0.44
TUBB3-204ENST00000554116 MST1RQ04912 1400 aa17.8■□□□□ 0.44
TUBB3-204ENST00000554116 MEX3CQ5U5Q3 659 aaKnown RBP17.79■□□□□ 0.44
TUBB3-204ENST00000554116 DCCP43146 1447 aa17.79■□□□□ 0.44
TUBB3-204ENST00000554116 NHSL1Q5SYE7 1610 aa17.79■□□□□ 0.44
TUBB3-204ENST00000554116 ASXL1Q8IXJ9 1541 aa17.78■□□□□ 0.44
TUBB3-204ENST00000554116 ITGAEP38570 1179 aa17.78■□□□□ 0.44
TUBB3-204ENST00000554116 UPF1Q92900 1129 aaKnown RBP eCLIP17.78■□□□□ 0.44
TUBB3-204ENST00000554116 CLTCL1P53675 1640 aa17.77■□□□□ 0.44
TUBB3-204ENST00000554116 SETD5Q9C0A6 1442 aa17.77■□□□□ 0.44
TUBB3-204ENST00000554116 PPARGC1BQ86YN6 1023 aaKnown RBP17.76■□□□□ 0.43
TUBB3-204ENST00000554116 NEXMIFQ5QGS0 1516 aa17.76■□□□□ 0.43
TUBB3-204ENST00000554116 DDX17Q92841 729 aaKnown RBP17.75■□□□□ 0.43
TUBB3-204ENST00000554116 NALCNQ8IZF0 1738 aa17.75■□□□□ 0.43
TUBB3-204ENST00000554116 TRIM52Q96A61 297 aa17.74■□□□□ 0.43
TUBB3-204ENST00000554116 CDK12Q9NYV4 1490 aaPredicted RBP17.74■□□□□ 0.43
TUBB3-204ENST00000554116 NUTM2BA6NNL0 878 aaPredicted RBP17.72■□□□□ 0.43
TUBB3-204ENST00000554116 NUTM2EB1AL46 878 aaPredicted RBP17.72■□□□□ 0.43
TUBB3-204ENST00000554116 NUTM2AQ8IVF1 878 aaPredicted RBP17.72■□□□□ 0.43
TUBB3-204ENST00000554116 ADGRL3Q9HAR2 1447 aa17.72■□□□□ 0.43
TUBB3-204ENST00000554116 EP400Q96L91 3159 aa17.71■□□□□ 0.43
TUBB3-204ENST00000554116 RXRBP28702 533 aa17.71■□□□□ 0.43
TUBB3-204ENST00000554116 ZNF326Q5BKZ1 582 aaKnown RBP17.7■□□□□ 0.42
TUBB3-204ENST00000554116 AFF2P51816 1311 aa17.7■□□□□ 0.42
TUBB3-204ENST00000554116 PNPLA6Q8IY17 1366 aa17.69■□□□□ 0.42
TUBB3-204ENST00000554116 LAMC1P11047 1609 aa17.69■□□□□ 0.42
TUBB3-204ENST00000554116 NAIPQ13075 1403 aa17.68■□□□□ 0.42
TUBB3-204ENST00000554116 KIF1BO60333 1816 aa17.68■□□□□ 0.42
TUBB3-204ENST00000554116 LRRC59Q96AG4 307 aaKnown RBP17.67■□□□□ 0.42
TUBB3-204ENST00000554116 C1orf167Q5SNV9 1468 aa17.66■□□□□ 0.42
TUBB3-204ENST00000554116 ROBO2Q9HCK4 1378 aa17.66■□□□□ 0.42
TUBB3-204ENST00000554116 RRBP1Q9P2E9 1410 aaKnown RBP17.64■□□□□ 0.42
TUBB3-204ENST00000554116 RGS12O14924 1447 aa17.64■□□□□ 0.41
TUBB3-204ENST00000554116 ORAI2Q96SN7 254 aa17.63■□□□□ 0.41
TUBB3-204ENST00000554116 PTCH1Q13635 1447 aa17.63■□□□□ 0.41
TUBB3-204ENST00000554116 PRAG1Q86YV5 1406 aa17.63■□□□□ 0.41
TUBB3-204ENST00000554116 C8orf37Q96NL8 207 aa17.62■□□□□ 0.41
TUBB3-204ENST00000554116 QTRT2Q9H974 415 aaKnown RBP17.61■□□□□ 0.41
TUBB3-204ENST00000554116 SOS2Q07890 1332 aaPredicted RBP17.61■□□□□ 0.41
TUBB3-204ENST00000554116 PPLO60437 1756 aa17.6■□□□□ 0.41
TUBB3-204ENST00000554116 RBM6P78332 1123 aaKnown RBP17.58■□□□□ 0.4
TUBB3-204ENST00000554116 ADAMTS2O95450 1211 aa17.57■□□□□ 0.4
TUBB3-204ENST00000554116 VGFO15240 615 aaPredicted RBP17.56■□□□□ 0.4
TUBB3-204ENST00000554116 COL22A1Q8NFW1 1626 aaPredicted RBP17.56■□□□□ 0.4
TUBB3-204ENST00000554116 HFM1A2PYH4 1435 aa17.55■□□□□ 0.4
TUBB3-204ENST00000554116 NGLY1Q96IV0 654 aa17.54■□□□□ 0.4
TUBB3-204ENST00000554116 RPGRIP1LQ68CZ1 1315 aa17.53■□□□□ 0.4
TUBB3-204ENST00000554116 FNBP4Q8N3X1 1017 aaPredicted RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms