RNA–Protein interactions for RNA: ENST00000553937.1

SDR39U1-207, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 217 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-207ENST00000553937 RRBP1Q9P2E9 1410 aaKnown RBP13.85□□□□□ -0.19
SDR39U1-207ENST00000553937 NUP155O75694 1391 aa13.83□□□□□ -0.19
SDR39U1-207ENST00000553937 RIMS2Q9UQ26 1411 aa13.83□□□□□ -0.2
SDR39U1-207ENST00000553937 HSPA1LP34931 641 aa13.83□□□□□ -0.2
SDR39U1-207ENST00000553937 MED1Q15648 1581 aaPredicted RBP13.83□□□□□ -0.2
SDR39U1-207ENST00000553937 SLC26A8Q96RN1 970 aa13.82□□□□□ -0.2
SDR39U1-207ENST00000553937 NKTRP30414 1462 aaKnown RBP13.81□□□□□ -0.2
SDR39U1-207ENST00000553937 KIF1BO60333 1816 aa13.81□□□□□ -0.2
SDR39U1-207ENST00000553937 ILDR2Q71H61 639 aa13.81□□□□□ -0.2
SDR39U1-207ENST00000553937 PLEKHG1Q9ULL1 1385 aa13.81□□□□□ -0.2
SDR39U1-207ENST00000553937 SENP3Q9H4L4 574 aaPredicted RBP13.8□□□□□ -0.2
SDR39U1-207ENST00000553937 DIP2AQ14689 1571 aa13.79□□□□□ -0.2
SDR39U1-207ENST00000553937 CLTCL1P53675 1640 aa13.79□□□□□ -0.2
SDR39U1-207ENST00000553937 CHGAP10645 457 aaKnown RBP13.79□□□□□ -0.2
SDR39U1-207ENST00000553937 BCANQ96GW7 911 aa13.79□□□□□ -0.2
SDR39U1-207ENST00000553937 ROBO1Q9Y6N7 1651 aa13.79□□□□□ -0.2
SDR39U1-207ENST00000553937 PPP1R15AO75807 674 aaPredicted RBP13.78□□□□□ -0.2
SDR39U1-207ENST00000553937 KCNA6P17658 529 aa13.78□□□□□ -0.2
SDR39U1-207ENST00000553937 TMEM94Q12767 1356 aa13.78□□□□□ -0.2
SDR39U1-207ENST00000553937 NAIPQ13075 1403 aa13.78□□□□□ -0.2
SDR39U1-207ENST00000553937 NRXN3Q9Y4C0 1643 aa13.77□□□□□ -0.21
SDR39U1-207ENST00000553937 TRPM2O94759 1503 aa13.76□□□□□ -0.21
SDR39U1-207ENST00000553937 ADAMTS13Q76LX8 1427 aa13.75□□□□□ -0.21
SDR39U1-207ENST00000553937 RBM33Q96EV2 1170 aaKnown RBP13.75□□□□□ -0.21
SDR39U1-207ENST00000553937 HDGFP51858 240 aaKnown RBP13.74□□□□□ -0.21
SDR39U1-207ENST00000553937 NUTM2DQ5VT03 806 aaPredicted RBP13.74□□□□□ -0.21
SDR39U1-207ENST00000553937 PROSER2Q86WR7 435 aaPredicted RBP13.74□□□□□ -0.21
SDR39U1-207ENST00000553937 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.74□□□□□ -0.21
SDR39U1-207ENST00000553937 HFM1A2PYH4 1435 aa13.73□□□□□ -0.21
SDR39U1-207ENST00000553937 XRN1Q8IZH2 1706 aaKnown RBP13.73□□□□□ -0.21
SDR39U1-207ENST00000553937 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.73□□□□□ -0.21
SDR39U1-207ENST00000553937 SETBP1Q9Y6X0 1596 aa13.72□□□□□ -0.21
SDR39U1-207ENST00000553937 NEXMIFQ5QGS0 1516 aa13.72□□□□□ -0.21
SDR39U1-207ENST00000553937 PHLPP1O60346 1717 aa13.72□□□□□ -0.21
SDR39U1-207ENST00000553937 FAM135BQ49AJ0 1406 aa13.71□□□□□ -0.22
SDR39U1-207ENST00000553937 MSH6P52701 1360 aa13.71□□□□□ -0.22
SDR39U1-207ENST00000553937 TBX22Q9Y458 520 aa13.7□□□□□ -0.22
SDR39U1-207ENST00000553937 PPLO60437 1756 aa13.7□□□□□ -0.22
SDR39U1-207ENST00000553937 SETD1AO15047 1707 aaKnown RBP13.69□□□□□ -0.22
SDR39U1-207ENST00000553937 PIK3R4Q99570 1358 aa13.69□□□□□ -0.22
SDR39U1-207ENST00000553937 SOCS7O14512 581 aa13.68□□□□□ -0.22
SDR39U1-207ENST00000553937 PTPRUQ92729 1446 aa13.67□□□□□ -0.22
SDR39U1-207ENST00000553937 ZNF326Q5BKZ1 582 aaKnown RBP13.67□□□□□ -0.22
SDR39U1-207ENST00000553937 TRIM52Q96A61 297 aa13.66□□□□□ -0.22
SDR39U1-207ENST00000553937 NALCNQ8IZF0 1738 aa13.66□□□□□ -0.22
SDR39U1-207ENST00000553937 NCOA3Q9Y6Q9 1424 aa13.65□□□□□ -0.22
SDR39U1-207ENST00000553937 COL16A1Q07092 1604 aaPredicted RBP13.65□□□□□ -0.22
SDR39U1-207ENST00000553937 IFT172Q9UG01 1749 aa13.64□□□□□ -0.23
SDR39U1-207ENST00000553937 PHF23Q9BUL5 403 aaPredicted RBP13.64□□□□□ -0.23
SDR39U1-207ENST00000553937 C14orf37Q86TY3 774 aa13.63□□□□□ -0.23
SDR39U1-207ENST00000553937 AMOTL2Q9Y2J4 779 aa13.63□□□□□ -0.23
SDR39U1-207ENST00000553937 SLC4A1APQ9BWU0 796 aaKnown RBP13.62□□□□□ -0.23
SDR39U1-207ENST00000553937 SLAIN2Q9P270 581 aa13.62□□□□□ -0.23
SDR39U1-207ENST00000553937 METP08581 1390 aa13.61□□□□□ -0.23
SDR39U1-207ENST00000553937 AHDC1Q5TGY3 1603 aaPredicted RBP13.61□□□□□ -0.23
SDR39U1-207ENST00000553937 SHPRHQ149N8 1683 aa13.6□□□□□ -0.23
SDR39U1-207ENST00000553937 NHSL1Q5SYE7 1610 aa13.6□□□□□ -0.23
SDR39U1-207ENST00000553937 DCCP43146 1447 aa13.59□□□□□ -0.23
SDR39U1-207ENST00000553937 CADPS2Q86UW7 1296 aa13.58□□□□□ -0.24
SDR39U1-207ENST00000553937 C19orf44Q9H6X5 657 aa13.58□□□□□ -0.24
SDR39U1-207ENST00000553937 ATF3P18847 181 aa13.57□□□□□ -0.24
SDR39U1-207ENST00000553937 FOXD1Q16676 465 aa13.57□□□□□ -0.24
SDR39U1-207ENST00000553937 ASXL1Q8IXJ9 1541 aa13.56□□□□□ -0.24
SDR39U1-207ENST00000553937 CCDC144AA2RUR9 1427 aa13.56□□□□□ -0.24
SDR39U1-207ENST00000553937 ADGRL3Q9HAR2 1447 aa13.56□□□□□ -0.24
SDR39U1-207ENST00000553937 JCADQ9P266 1359 aa13.55□□□□□ -0.24
SDR39U1-207ENST00000553937 MST1RQ04912 1400 aa13.55□□□□□ -0.24
SDR39U1-207ENST00000553937 VGFO15240 615 aaPredicted RBP13.54□□□□□ -0.24
SDR39U1-207ENST00000553937 RGS17Q9UGC6 210 aaPredicted RBP13.54□□□□□ -0.24
SDR39U1-207ENST00000553937 RPGRIP1LQ68CZ1 1315 aa13.54□□□□□ -0.24
SDR39U1-207ENST00000553937 PTCH1Q13635 1447 aa13.54□□□□□ -0.24
SDR39U1-207ENST00000553937 KNDC1Q76NI1 1749 aa13.53□□□□□ -0.24
SDR39U1-207ENST00000553937 MPHOSPH9Q99550 1183 aa13.53□□□□□ -0.24
SDR39U1-207ENST00000553937 SPATA31E1Q6ZUB1 1445 aa13.53□□□□□ -0.24
SDR39U1-207ENST00000553937 LRP6O75581 1613 aa13.53□□□□□ -0.24
SDR39U1-207ENST00000553937 BRINP3Q76B58 766 aa13.52□□□□□ -0.25
SDR39U1-207ENST00000553937 PRAG1Q86YV5 1406 aa13.52□□□□□ -0.25
SDR39U1-207ENST00000553937 LAMC1P11047 1609 aa13.51□□□□□ -0.25
SDR39U1-207ENST00000553937 SETD5Q9C0A6 1442 aa13.51□□□□□ -0.25
SDR39U1-207ENST00000553937 ROBO2Q9HCK4 1378 aa13.5□□□□□ -0.25
SDR39U1-207ENST00000553937 CDC42BPGQ6DT37 1551 aa13.49□□□□□ -0.25
SDR39U1-207ENST00000553937 ADGRF5Q8IZF2 1346 aa13.48□□□□□ -0.25
SDR39U1-207ENST00000553937 RAB3GAP2Q9H2M9 1393 aa13.47□□□□□ -0.25
SDR39U1-207ENST00000553937 SPATA31A6Q5VVP1 1343 aa13.47□□□□□ -0.25
SDR39U1-207ENST00000553937 RGL3Q3MIN7 710 aa13.47□□□□□ -0.25
SDR39U1-207ENST00000553937 C1orf167Q5SNV9 1468 aa13.47□□□□□ -0.25
SDR39U1-207ENST00000553937 PIK3C2GO75747 1445 aa13.47□□□□□ -0.25
SDR39U1-207ENST00000553937 ANKRD30BQ9BXX2 1392 aa13.46□□□□□ -0.25
SDR39U1-207ENST00000553937 POTEAQ6S8J7 498 aa13.46□□□□□ -0.25
SDR39U1-207ENST00000553937 ACIN1Q9UKV3 1341 aaKnown RBP13.45□□□□□ -0.26
SDR39U1-207ENST00000553937 FMN2Q9NZ56 1722 aa13.45□□□□□ -0.26
SDR39U1-207ENST00000553937 RGPD8O14715 1765 aaPredicted RBP13.45□□□□□ -0.26
SDR39U1-207ENST00000553937 TECPR2O15040 1411 aa13.44□□□□□ -0.26
SDR39U1-207ENST00000553937 MYOM2P54296 1465 aa13.43□□□□□ -0.26
SDR39U1-207ENST00000553937 DDX17Q92841 729 aaKnown RBP13.43□□□□□ -0.26
SDR39U1-207ENST00000553937 NRXN1Q9ULB1 1477 aa13.42□□□□□ -0.26
SDR39U1-207ENST00000553937 MEX3CQ5U5Q3 659 aaKnown RBP13.42□□□□□ -0.26
SDR39U1-207ENST00000553937 MARF1Q9Y4F3 1742 aaKnown RBP13.42□□□□□ -0.26
SDR39U1-207ENST00000553937 COL22A1Q8NFW1 1626 aaPredicted RBP13.41□□□□□ -0.26
SDR39U1-207ENST00000553937 LRPPRCP42704 1394 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms