RNA–Protein interactions for RNA: ENST00000553898.1

PCNX4-207, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-207ENST00000553898 TMEM131LA2VDJ0 1609 aa14.4□□□□□ -0.1
PCNX4-207ENST00000553898 SLIT1O75093 1534 aa14.39□□□□□ -0.11
PCNX4-207ENST00000553898 NPHP4O75161 1426 aaPredicted RBP14.39□□□□□ -0.11
PCNX4-207ENST00000553898 RIMS2Q9UQ26 1411 aa14.39□□□□□ -0.11
PCNX4-207ENST00000553898 LTBP4Q8N2S1 1624 aa14.38□□□□□ -0.11
PCNX4-207ENST00000553898 IQGAP1P46940 1657 aa14.37□□□□□ -0.11
PCNX4-207ENST00000553898 ARHGAP23Q9P227 1491 aa14.37□□□□□ -0.11
PCNX4-207ENST00000553898 RGL3Q3MIN7 710 aa14.36□□□□□ -0.11
PCNX4-207ENST00000553898 NUTM2DQ5VT03 806 aaPredicted RBP14.36□□□□□ -0.11
PCNX4-207ENST00000553898 LTKP29376 864 aa14.35□□□□□ -0.11
PCNX4-207ENST00000553898 MED14O60244 1454 aa14.34□□□□□ -0.11
PCNX4-207ENST00000553898 ILDR1Q86SU0 546 aaPredicted RBP14.34□□□□□ -0.11
PCNX4-207ENST00000553898 VGFO15240 615 aaPredicted RBP14.32□□□□□ -0.12
PCNX4-207ENST00000553898 RPGRIP1LQ68CZ1 1315 aa14.32□□□□□ -0.12
PCNX4-207ENST00000553898 ANKRD30BQ9BXX2 1392 aa14.31□□□□□ -0.12
PCNX4-207ENST00000553898 PLEKHG1Q9ULL1 1385 aa14.31□□□□□ -0.12
PCNX4-207ENST00000553898 ZFYVE9O95405 1425 aa14.31□□□□□ -0.12
PCNX4-207ENST00000553898 CERKQ8TCT0 537 aa14.3□□□□□ -0.12
PCNX4-207ENST00000553898 SLC26A8Q96RN1 970 aa14.3□□□□□ -0.12
PCNX4-207ENST00000553898 STRCP1A6NGW2 1772 aa14.29□□□□□ -0.12
PCNX4-207ENST00000553898 ZNF335Q9H4Z2 1342 aaPredicted RBP14.29□□□□□ -0.12
PCNX4-207ENST00000553898 NEXMIFQ5QGS0 1516 aa14.27□□□□□ -0.12
PCNX4-207ENST00000553898 FBXO41Q8TF61 875 aa14.27□□□□□ -0.13
PCNX4-207ENST00000553898 NEUROD1Q13562 356 aa14.26□□□□□ -0.13
PCNX4-207ENST00000553898 PPLO60437 1756 aa14.26□□□□□ -0.13
PCNX4-207ENST00000553898 IQSEC2Q5JU85 1478 aa14.25□□□□□ -0.13
PCNX4-207ENST00000553898 DHX57Q6P158 1386 aaKnown RBP14.25□□□□□ -0.13
PCNX4-207ENST00000553898 DIP2AQ14689 1571 aa14.25□□□□□ -0.13
PCNX4-207ENST00000553898 SPATA31E1Q6ZUB1 1445 aa14.24□□□□□ -0.13
PCNX4-207ENST00000553898 KDM2AQ9Y2K7 1162 aa14.24□□□□□ -0.13
PCNX4-207ENST00000553898 CPS1P31327 1500 aa14.24□□□□□ -0.13
PCNX4-207ENST00000553898 DCAF11Q8TEB1 546 aa14.23□□□□□ -0.13
PCNX4-207ENST00000553898 TBX22Q9Y458 520 aa14.23□□□□□ -0.13
PCNX4-207ENST00000553898 SETBP1Q9Y6X0 1596 aa14.22□□□□□ -0.13
PCNX4-207ENST00000553898 C14orf37Q86TY3 774 aa14.21□□□□□ -0.13
PCNX4-207ENST00000553898 CCER1Q8TC90 406 aaPredicted RBP14.21□□□□□ -0.13
PCNX4-207ENST00000553898 KCNA6P17658 529 aa14.2□□□□□ -0.14
PCNX4-207ENST00000553898 PROSER2Q86WR7 435 aaPredicted RBP14.2□□□□□ -0.14
PCNX4-207ENST00000553898 IFT172Q9UG01 1749 aa14.2□□□□□ -0.14
PCNX4-207ENST00000553898 XIRP1Q702N8 1843 aaKnown RBP14.2□□□□□ -0.14
PCNX4-207ENST00000553898 ADGRF5Q8IZF2 1346 aa14.19□□□□□ -0.14
PCNX4-207ENST00000553898 STAC3Q96MF2 364 aa14.19□□□□□ -0.14
PCNX4-207ENST00000553898 SIN3AQ96ST3 1273 aa14.19□□□□□ -0.14
PCNX4-207ENST00000553898 PIK3R4Q99570 1358 aa14.19□□□□□ -0.14
PCNX4-207ENST00000553898 ADAMTS13Q76LX8 1427 aa14.18□□□□□ -0.14
PCNX4-207ENST00000553898 TONSLQ96HA7 1378 aa14.18□□□□□ -0.14
PCNX4-207ENST00000553898 MYOM2P54296 1465 aa14.18□□□□□ -0.14
PCNX4-207ENST00000553898 NWD1Q149M9 1564 aa14.17□□□□□ -0.14
PCNX4-207ENST00000553898 ALKQ9UM73 1620 aa14.16□□□□□ -0.14
PCNX4-207ENST00000553898 NRXN3Q9Y4C0 1643 aa14.16□□□□□ -0.14
PCNX4-207ENST00000553898 AMOTL2Q9Y2J4 779 aa14.16□□□□□ -0.14
PCNX4-207ENST00000553898 NKTRP30414 1462 aaKnown RBP14.16□□□□□ -0.14
PCNX4-207ENST00000553898 SCAF1Q9H7N4 1312 aaKnown RBP14.15□□□□□ -0.14
PCNX4-207ENST00000553898 LRRC7Q96NW7 1537 aa14.15□□□□□ -0.14
PCNX4-207ENST00000553898 LAMC1P11047 1609 aa14.15□□□□□ -0.14
PCNX4-207ENST00000553898 CHD2O14647 1828 aaKnown RBP14.15□□□□□ -0.14
PCNX4-207ENST00000553898 PIK3C2GO75747 1445 aa14.15□□□□□ -0.14
PCNX4-207ENST00000553898 STK26Q9P289 416 aa14.14□□□□□ -0.15
PCNX4-207ENST00000553898 METP08581 1390 aa14.13□□□□□ -0.15
PCNX4-207ENST00000553898 UBAP1LF5GYI3 381 aa14.13□□□□□ -0.15
PCNX4-207ENST00000553898 TMEM94Q12767 1356 aa14.12□□□□□ -0.15
PCNX4-207ENST00000553898 TOM1O60784 492 aa14.12□□□□□ -0.15
PCNX4-207ENST00000553898 MSH6P52701 1360 aa14.11□□□□□ -0.15
PCNX4-207ENST00000553898 CFAP70Q5T0N1 1121 aa14.11□□□□□ -0.15
PCNX4-207ENST00000553898 TMEM132EQ6IEE7 984 aa14.11□□□□□ -0.15
PCNX4-207ENST00000553898 L3MBTL2Q969R5 705 aa14.11□□□□□ -0.15
PCNX4-207ENST00000553898 RBM33Q96EV2 1170 aaKnown RBP14.11□□□□□ -0.15
PCNX4-207ENST00000553898 CLSPNQ9HAW4 1339 aa14.11□□□□□ -0.15
PCNX4-207ENST00000553898 C14orf93Q9H972 538 aaKnown RBP14.1□□□□□ -0.15
PCNX4-207ENST00000553898 NRXN1Q9ULB1 1477 aa14.09□□□□□ -0.15
PCNX4-207ENST00000553898 SETD1AO15047 1707 aaKnown RBP14.09□□□□□ -0.15
PCNX4-207ENST00000553898 PTPRUQ92729 1446 aa14.08□□□□□ -0.15
PCNX4-207ENST00000553898 XRN1Q8IZH2 1706 aaKnown RBP14.08□□□□□ -0.16
PCNX4-207ENST00000553898 ATF3P18847 181 aa14.08□□□□□ -0.16
PCNX4-207ENST00000553898 PIP4K2BP78356 416 aa14.08□□□□□ -0.16
PCNX4-207ENST00000553898 POGKQ9P215 609 aa14.07□□□□□ -0.16
PCNX4-207ENST00000553898 LRPPRCP42704 1394 aaKnown RBP14.07□□□□□ -0.16
PCNX4-207ENST00000553898 YTHDC2Q9H6S0 1430 aaKnown RBP14.07□□□□□ -0.16
PCNX4-207ENST00000553898 PTCH1Q13635 1447 aa14.06□□□□□ -0.16
PCNX4-207ENST00000553898 PRAG1Q86YV5 1406 aa14.06□□□□□ -0.16
PCNX4-207ENST00000553898 NCOA3Q9Y6Q9 1424 aa14.05□□□□□ -0.16
PCNX4-207ENST00000553898 CADPS2Q86UW7 1296 aa14.04□□□□□ -0.16
PCNX4-207ENST00000553898 C19orf44Q9H6X5 657 aa14.04□□□□□ -0.16
PCNX4-207ENST00000553898 TRAK1Q9UPV9 953 aa14.04□□□□□ -0.16
PCNX4-207ENST00000553898 KIAA1210Q9ULL0 1709 aa14.04□□□□□ -0.16
PCNX4-207ENST00000553898 SAFB2Q14151 953 aaKnown RBP eCLIP14.03□□□□□ -0.16
PCNX4-207ENST00000553898 ROCK2O75116 1388 aaKnown RBP14.03□□□□□ -0.16
PCNX4-207ENST00000553898 ABCC11Q96J66 1382 aa14.03□□□□□ -0.16
PCNX4-207ENST00000553898 ROBO2Q9HCK4 1378 aa14.03□□□□□ -0.16
PCNX4-207ENST00000553898 KNDC1Q76NI1 1749 aa14.03□□□□□ -0.16
PCNX4-207ENST00000553898 ASXL1Q8IXJ9 1541 aa14.02□□□□□ -0.16
PCNX4-207ENST00000553898 ADGRL3Q9HAR2 1447 aa14.01□□□□□ -0.17
PCNX4-207ENST00000553898 PRAM1Q96QH2 718 aa14.01□□□□□ -0.17
PCNX4-207ENST00000553898 WAPLQ7Z5K2 1190 aa14□□□□□ -0.17
PCNX4-207ENST00000553898 TIMELESSQ9UNS1 1208 aa14□□□□□ -0.17
PCNX4-207ENST00000553898 SIPA1L2Q9P2F8 1722 aaPredicted RBP14□□□□□ -0.17
PCNX4-207ENST00000553898 TECPR2O15040 1411 aa13.99□□□□□ -0.17
PCNX4-207ENST00000553898 FAM135BQ49AJ0 1406 aa13.99□□□□□ -0.17
PCNX4-207ENST00000553898 ADGRB1O14514 1584 aa13.99□□□□□ -0.17
PCNX4-207ENST00000553898 DCCP43146 1447 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms