RNA–Protein interactions for RNA: ENST00000553727.1

SV2B-204, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

TSL 4

Gene SV2B, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-204ENST00000553727 RIMS2Q9UQ26 1411 aa20.92■□□□□ 0.94
SV2B-204ENST00000553727 NPHP4O75161 1426 aaPredicted RBP20.91■□□□□ 0.94
SV2B-204ENST00000553727 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.91■□□□□ 0.94
SV2B-204ENST00000553727 RGL3Q3MIN7 710 aa20.9■□□□□ 0.94
SV2B-204ENST00000553727 ANKRD30BQ9BXX2 1392 aa20.89■□□□□ 0.93
SV2B-204ENST00000553727 NEURL4Q96JN8 1562 aa20.89■□□□□ 0.93
SV2B-204ENST00000553727 POLR1AO95602 1720 aaPredicted RBP20.88■□□□□ 0.93
SV2B-204ENST00000553727 MED14O60244 1454 aa20.88■□□□□ 0.93
SV2B-204ENST00000553727 MYO5BQ9ULV0 1848 aa20.88■□□□□ 0.93
SV2B-204ENST00000553727 ZFYVE9O95405 1425 aa20.87■□□□□ 0.93
SV2B-204ENST00000553727 KIF1BO60333 1816 aa20.85■□□□□ 0.93
SV2B-204ENST00000553727 SLC26A8Q96RN1 970 aa20.84■□□□□ 0.93
SV2B-204ENST00000553727 DHX57Q6P158 1386 aaKnown RBP20.82■□□□□ 0.92
SV2B-204ENST00000553727 RPGRIP1LQ68CZ1 1315 aa20.81■□□□□ 0.92
SV2B-204ENST00000553727 ZNF335Q9H4Z2 1342 aaPredicted RBP20.81■□□□□ 0.92
SV2B-204ENST00000553727 IQGAP1P46940 1657 aa20.81■□□□□ 0.92
SV2B-204ENST00000553727 PLEKHG1Q9ULL1 1385 aa20.81■□□□□ 0.92
SV2B-204ENST00000553727 SPATA31E1Q6ZUB1 1445 aa20.8■□□□□ 0.92
SV2B-204ENST00000553727 VGFO15240 615 aaPredicted RBP20.8■□□□□ 0.92
SV2B-204ENST00000553727 NEXMIFQ5QGS0 1516 aa20.78■□□□□ 0.92
SV2B-204ENST00000553727 SIN3AQ96ST3 1273 aa20.75■□□□□ 0.91
SV2B-204ENST00000553727 NEUROD1Q13562 356 aa20.74■□□□□ 0.91
SV2B-204ENST00000553727 TBX22Q9Y458 520 aa20.74■□□□□ 0.91
SV2B-204ENST00000553727 KDM2AQ9Y2K7 1162 aa20.72■□□□□ 0.91
SV2B-204ENST00000553727 ADGRF5Q8IZF2 1346 aa20.72■□□□□ 0.91
SV2B-204ENST00000553727 CERKQ8TCT0 537 aa20.71■□□□□ 0.91
SV2B-204ENST00000553727 ADAMTS13Q76LX8 1427 aa20.7■□□□□ 0.9
SV2B-204ENST00000553727 DCAF11Q8TEB1 546 aa20.7■□□□□ 0.9
SV2B-204ENST00000553727 LTBP4Q8N2S1 1624 aa20.68■□□□□ 0.9
SV2B-204ENST00000553727 KCNA6P17658 529 aa20.68■□□□□ 0.9
SV2B-204ENST00000553727 PPLO60437 1756 aa20.67■□□□□ 0.9
SV2B-204ENST00000553727 SETBP1Q9Y6X0 1596 aa20.66■□□□□ 0.9
SV2B-204ENST00000553727 DIP2AQ14689 1571 aa20.63■□□□□ 0.89
SV2B-204ENST00000553727 METP08581 1390 aa20.63■□□□□ 0.89
SV2B-204ENST00000553727 PROSER2Q86WR7 435 aaPredicted RBP20.63■□□□□ 0.89
SV2B-204ENST00000553727 AMOTL2Q9Y2J4 779 aa20.63■□□□□ 0.89
SV2B-204ENST00000553727 NRXN3Q9Y4C0 1643 aa20.63■□□□□ 0.89
SV2B-204ENST00000553727 CPS1P31327 1500 aa20.63■□□□□ 0.89
SV2B-204ENST00000553727 PIK3R4Q99570 1358 aa20.62■□□□□ 0.89
SV2B-204ENST00000553727 STAC3Q96MF2 364 aa20.62■□□□□ 0.89
SV2B-204ENST00000553727 IFT172Q9UG01 1749 aa20.61■□□□□ 0.89
SV2B-204ENST00000553727 L3MBTL2Q969R5 705 aa20.61■□□□□ 0.89
SV2B-204ENST00000553727 MYOM2P54296 1465 aa20.61■□□□□ 0.89
SV2B-204ENST00000553727 ALKQ9UM73 1620 aa20.6■□□□□ 0.89
SV2B-204ENST00000553727 CCER1Q8TC90 406 aaPredicted RBP20.6■□□□□ 0.89
SV2B-204ENST00000553727 RBM33Q96EV2 1170 aaKnown RBP20.6■□□□□ 0.89
SV2B-204ENST00000553727 PIK3C2GO75747 1445 aa20.6■□□□□ 0.89
SV2B-204ENST00000553727 STRCP1A6NGW2 1772 aa20.59■□□□□ 0.89
SV2B-204ENST00000553727 CFAP70Q5T0N1 1121 aa20.59■□□□□ 0.89
SV2B-204ENST00000553727 C14orf93Q9H972 538 aaKnown RBP20.59■□□□□ 0.89
SV2B-204ENST00000553727 PTPRUQ92729 1446 aa20.59■□□□□ 0.89
SV2B-204ENST00000553727 TMEM132EQ6IEE7 984 aa20.58■□□□□ 0.89
SV2B-204ENST00000553727 FBXO41Q8TF61 875 aa20.58■□□□□ 0.89
SV2B-204ENST00000553727 LRRC7Q96NW7 1537 aa20.57■□□□□ 0.88
SV2B-204ENST00000553727 NRXN1Q9ULB1 1477 aa20.56■□□□□ 0.88
SV2B-204ENST00000553727 STK26Q9P289 416 aa20.56■□□□□ 0.88
SV2B-204ENST00000553727 TMEM94Q12767 1356 aa20.55■□□□□ 0.88
SV2B-204ENST00000553727 NWD1Q149M9 1564 aa20.55■□□□□ 0.88
SV2B-204ENST00000553727 CHD2O14647 1828 aaKnown RBP20.54■□□□□ 0.88
SV2B-204ENST00000553727 TONSLQ96HA7 1378 aa20.54■□□□□ 0.88
SV2B-204ENST00000553727 NKTRP30414 1462 aaKnown RBP20.54■□□□□ 0.88
SV2B-204ENST00000553727 C14orf37Q86TY3 774 aa20.53■□□□□ 0.88
SV2B-204ENST00000553727 IQSEC2Q5JU85 1478 aa20.51■□□□□ 0.87
SV2B-204ENST00000553727 UBAP1LF5GYI3 381 aa20.51■□□□□ 0.87
SV2B-204ENST00000553727 CLSPNQ9HAW4 1339 aa20.51■□□□□ 0.87
SV2B-204ENST00000553727 SETD1AO15047 1707 aaKnown RBP20.5■□□□□ 0.87
SV2B-204ENST00000553727 LRPPRCP42704 1394 aaKnown RBP20.47■□□□□ 0.87
SV2B-204ENST00000553727 PRAG1Q86YV5 1406 aa20.47■□□□□ 0.87
SV2B-204ENST00000553727 XRN1Q8IZH2 1706 aaKnown RBP20.47■□□□□ 0.87
SV2B-204ENST00000553727 ROBO2Q9HCK4 1378 aa20.46■□□□□ 0.87
SV2B-204ENST00000553727 YTHDC2Q9H6S0 1430 aaKnown RBP20.46■□□□□ 0.87
SV2B-204ENST00000553727 TOM1O60784 492 aa20.46■□□□□ 0.87
SV2B-204ENST00000553727 ASXL1Q8IXJ9 1541 aa20.46■□□□□ 0.87
SV2B-204ENST00000553727 LAMC1P11047 1609 aa20.45■□□□□ 0.86
SV2B-204ENST00000553727 MSH6P52701 1360 aa20.45■□□□□ 0.86
SV2B-204ENST00000553727 ABCC11Q96J66 1382 aa20.45■□□□□ 0.86
SV2B-204ENST00000553727 NBPF1Q3BBV0 1214 aa20.44■□□□□ 0.86
SV2B-204ENST00000553727 WAPLQ7Z5K2 1190 aa20.44■□□□□ 0.86
SV2B-204ENST00000553727 TRAK1Q9UPV9 953 aa20.44■□□□□ 0.86
SV2B-204ENST00000553727 SCAF1Q9H7N4 1312 aaKnown RBP20.44■□□□□ 0.86
SV2B-204ENST00000553727 NCOA3Q9Y6Q9 1424 aa20.44■□□□□ 0.86
SV2B-204ENST00000553727 PIP4K2BP78356 416 aa20.43■□□□□ 0.86
SV2B-204ENST00000553727 C19orf44Q9H6X5 657 aa20.43■□□□□ 0.86
SV2B-204ENST00000553727 PTCH1Q13635 1447 aa20.43■□□□□ 0.86
SV2B-204ENST00000553727 NBPF8Q3BBV2 869 aa20.42■□□□□ 0.86
SV2B-204ENST00000553727 XIRP1Q702N8 1843 aaKnown RBP20.41■□□□□ 0.86
SV2B-204ENST00000553727 ADGRB1O14514 1584 aa20.4■□□□□ 0.86
SV2B-204ENST00000553727 ATF3P18847 181 aa20.4■□□□□ 0.86
SV2B-204ENST00000553727 POGKQ9P215 609 aa20.4■□□□□ 0.86
SV2B-204ENST00000553727 TECPR2O15040 1411 aa20.39■□□□□ 0.85
SV2B-204ENST00000553727 SAFB2Q14151 953 aaKnown RBP eCLIP20.39■□□□□ 0.85
SV2B-204ENST00000553727 SIRT1Q96EB6 747 aa20.39■□□□□ 0.85
SV2B-204ENST00000553727 PRAM1Q96QH2 718 aa20.39■□□□□ 0.85
SV2B-204ENST00000553727 PLEKHH1Q9ULM0 1364 aa20.38■□□□□ 0.85
SV2B-204ENST00000553727 CADPS2Q86UW7 1296 aa20.37■□□□□ 0.85
SV2B-204ENST00000553727 TIMELESSQ9UNS1 1208 aa20.37■□□□□ 0.85
SV2B-204ENST00000553727 ADGRL3Q9HAR2 1447 aa20.36■□□□□ 0.85
SV2B-204ENST00000553727 ROCK2O75116 1388 aaKnown RBP20.35■□□□□ 0.85
SV2B-204ENST00000553727 SLAIN2Q9P270 581 aa20.35■□□□□ 0.85
SV2B-204ENST00000553727 FAM135BQ49AJ0 1406 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms