RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.22■□□□□ 0.83
TUBB3-202ENST00000553656 DHX57Q6P158 1386 aaKnown RBP20.21■□□□□ 0.83
TUBB3-202ENST00000553656 NPHP4O75161 1426 aaPredicted RBP20.2■□□□□ 0.82
TUBB3-202ENST00000553656 LTKP29376 864 aa20.2■□□□□ 0.82
TUBB3-202ENST00000553656 NEURL4Q96JN8 1562 aa20.2■□□□□ 0.82
TUBB3-202ENST00000553656 ZFYVE9O95405 1425 aa20.19■□□□□ 0.82
TUBB3-202ENST00000553656 MED14O60244 1454 aa20.18■□□□□ 0.82
TUBB3-202ENST00000553656 BCANQ96GW7 911 aa20.18■□□□□ 0.82
TUBB3-202ENST00000553656 IQGAP1P46940 1657 aa20.17■□□□□ 0.82
TUBB3-202ENST00000553656 RGL3Q3MIN7 710 aa20.17■□□□□ 0.82
TUBB3-202ENST00000553656 RPGRIP1LQ68CZ1 1315 aa20.17■□□□□ 0.82
TUBB3-202ENST00000553656 SPATA31E1Q6ZUB1 1445 aa20.16■□□□□ 0.82
TUBB3-202ENST00000553656 NUTM2DQ5VT03 806 aaPredicted RBP20.15■□□□□ 0.82
TUBB3-202ENST00000553656 NEXMIFQ5QGS0 1516 aa20.14■□□□□ 0.81
TUBB3-202ENST00000553656 PLEKHG1Q9ULL1 1385 aa20.13■□□□□ 0.81
TUBB3-202ENST00000553656 VGFO15240 615 aaPredicted RBP20.12■□□□□ 0.81
TUBB3-202ENST00000553656 SENP3Q9H4L4 574 aaPredicted RBP20.1■□□□□ 0.81
TUBB3-202ENST00000553656 PPLO60437 1756 aa20.09■□□□□ 0.81
TUBB3-202ENST00000553656 SLC26A8Q96RN1 970 aa20.07■□□□□ 0.8
TUBB3-202ENST00000553656 NEUROD1Q13562 356 aa20.06■□□□□ 0.8
TUBB3-202ENST00000553656 IFT172Q9UG01 1749 aa20.05■□□□□ 0.8
TUBB3-202ENST00000553656 SIN3AQ96ST3 1273 aa20.05■□□□□ 0.8
TUBB3-202ENST00000553656 DIP2AQ14689 1571 aa20.04■□□□□ 0.8
TUBB3-202ENST00000553656 SETBP1Q9Y6X0 1596 aa20.04■□□□□ 0.8
TUBB3-202ENST00000553656 MYOM2P54296 1465 aa20.03■□□□□ 0.8
TUBB3-202ENST00000553656 ZNF335Q9H4Z2 1342 aaPredicted RBP20.02■□□□□ 0.8
TUBB3-202ENST00000553656 CCER1Q8TC90 406 aaPredicted RBP20.02■□□□□ 0.8
TUBB3-202ENST00000553656 DCAF11Q8TEB1 546 aa20.02■□□□□ 0.8
TUBB3-202ENST00000553656 TBX22Q9Y458 520 aa20.02■□□□□ 0.8
TUBB3-202ENST00000553656 ADAMTS13Q76LX8 1427 aa20.02■□□□□ 0.79
TUBB3-202ENST00000553656 STAC3Q96MF2 364 aa20.01■□□□□ 0.79
TUBB3-202ENST00000553656 ADGRF5Q8IZF2 1346 aa20.01■□□□□ 0.79
TUBB3-202ENST00000553656 KDM2AQ9Y2K7 1162 aa20■□□□□ 0.79
TUBB3-202ENST00000553656 CLSPNQ9HAW4 1339 aa20■□□□□ 0.79
TUBB3-202ENST00000553656 NRXN3Q9Y4C0 1643 aa19.99■□□□□ 0.79
TUBB3-202ENST00000553656 PIK3R4Q99570 1358 aa19.97■□□□□ 0.79
TUBB3-202ENST00000553656 PIK3C2GO75747 1445 aa19.97■□□□□ 0.79
TUBB3-202ENST00000553656 CPS1P31327 1500 aa19.97■□□□□ 0.79
TUBB3-202ENST00000553656 TONSLQ96HA7 1378 aa19.96■□□□□ 0.79
TUBB3-202ENST00000553656 ALKQ9UM73 1620 aa19.95■□□□□ 0.78
TUBB3-202ENST00000553656 NRXN1Q9ULB1 1477 aa19.95■□□□□ 0.78
TUBB3-202ENST00000553656 KCNA6P17658 529 aa19.95■□□□□ 0.78
TUBB3-202ENST00000553656 LTBP4Q8N2S1 1624 aa19.94■□□□□ 0.78
TUBB3-202ENST00000553656 L3MBTL2Q969R5 705 aa19.94■□□□□ 0.78
TUBB3-202ENST00000553656 LAMC1P11047 1609 aa19.93■□□□□ 0.78
TUBB3-202ENST00000553656 NWD1Q149M9 1564 aa19.92■□□□□ 0.78
TUBB3-202ENST00000553656 METP08581 1390 aa19.92■□□□□ 0.78
TUBB3-202ENST00000553656 NKTRP30414 1462 aaKnown RBP19.91■□□□□ 0.78
TUBB3-202ENST00000553656 CHD2O14647 1828 aaKnown RBP19.9■□□□□ 0.78
TUBB3-202ENST00000553656 CERKQ8TCT0 537 aa19.9■□□□□ 0.78
TUBB3-202ENST00000553656 SETD1AO15047 1707 aaKnown RBP19.9■□□□□ 0.78
TUBB3-202ENST00000553656 STRCP1A6NGW2 1772 aa19.89■□□□□ 0.77
TUBB3-202ENST00000553656 C14orf93Q9H972 538 aaKnown RBP19.89■□□□□ 0.77
TUBB3-202ENST00000553656 AMOTL2Q9Y2J4 779 aa19.89■□□□□ 0.77
TUBB3-202ENST00000553656 CFAP70Q5T0N1 1121 aa19.88■□□□□ 0.77
TUBB3-202ENST00000553656 PROSER2Q86WR7 435 aaPredicted RBP19.87■□□□□ 0.77
TUBB3-202ENST00000553656 PRAG1Q86YV5 1406 aa19.86■□□□□ 0.77
TUBB3-202ENST00000553656 PTPRUQ92729 1446 aa19.86■□□□□ 0.77
TUBB3-202ENST00000553656 LRRC7Q96NW7 1537 aa19.86■□□□□ 0.77
TUBB3-202ENST00000553656 XRN1Q8IZH2 1706 aaKnown RBP19.85■□□□□ 0.77
TUBB3-202ENST00000553656 IQSEC2Q5JU85 1478 aa19.85■□□□□ 0.77
TUBB3-202ENST00000553656 TMEM132EQ6IEE7 984 aa19.84■□□□□ 0.77
TUBB3-202ENST00000553656 STK26Q9P289 416 aa19.83■□□□□ 0.77
TUBB3-202ENST00000553656 LRPPRCP42704 1394 aaKnown RBP19.83■□□□□ 0.76
TUBB3-202ENST00000553656 ASXL1Q8IXJ9 1541 aa19.82■□□□□ 0.76
TUBB3-202ENST00000553656 C14orf37Q86TY3 774 aa19.82■□□□□ 0.76
TUBB3-202ENST00000553656 TIMELESSQ9UNS1 1208 aa19.82■□□□□ 0.76
TUBB3-202ENST00000553656 KIAA1210Q9ULL0 1709 aa19.82■□□□□ 0.76
TUBB3-202ENST00000553656 TMEM94Q12767 1356 aa19.82■□□□□ 0.76
TUBB3-202ENST00000553656 PTCH1Q13635 1447 aa19.81■□□□□ 0.76
TUBB3-202ENST00000553656 YTHDC2Q9H6S0 1430 aaKnown RBP19.81■□□□□ 0.76
TUBB3-202ENST00000553656 RBM33Q96EV2 1170 aaKnown RBP19.79■□□□□ 0.76
TUBB3-202ENST00000553656 ABCC11Q96J66 1382 aa19.79■□□□□ 0.76
TUBB3-202ENST00000553656 ADGRB1O14514 1584 aa19.78■□□□□ 0.76
TUBB3-202ENST00000553656 KNDC1Q76NI1 1749 aa19.78■□□□□ 0.76
TUBB3-202ENST00000553656 TECPR2O15040 1411 aa19.77■□□□□ 0.76
TUBB3-202ENST00000553656 NCOA3Q9Y6Q9 1424 aa19.77■□□□□ 0.76
TUBB3-202ENST00000553656 MSH6P52701 1360 aa19.77■□□□□ 0.76
TUBB3-202ENST00000553656 ROBO2Q9HCK4 1378 aa19.77■□□□□ 0.76
TUBB3-202ENST00000553656 ROCK2O75116 1388 aaKnown RBP19.75■□□□□ 0.75
TUBB3-202ENST00000553656 TRPM1Q7Z4N2 1603 aa19.75■□□□□ 0.75
TUBB3-202ENST00000553656 XIRP1Q702N8 1843 aaKnown RBP19.74■□□□□ 0.75
TUBB3-202ENST00000553656 TRAK1Q9UPV9 953 aa19.74■□□□□ 0.75
TUBB3-202ENST00000553656 NBPF1Q3BBV0 1214 aa19.73■□□□□ 0.75
TUBB3-202ENST00000553656 NBPF8Q3BBV2 869 aa19.73■□□□□ 0.75
TUBB3-202ENST00000553656 FAM135BQ49AJ0 1406 aa19.73■□□□□ 0.75
TUBB3-202ENST00000553656 DLC1Q96QB1 1528 aa19.72■□□□□ 0.75
TUBB3-202ENST00000553656 UBAP1LF5GYI3 381 aa19.72■□□□□ 0.75
TUBB3-202ENST00000553656 TOM1O60784 492 aa19.72■□□□□ 0.75
TUBB3-202ENST00000553656 SIRT1Q96EB6 747 aa19.72■□□□□ 0.75
TUBB3-202ENST00000553656 POGKQ9P215 609 aa19.72■□□□□ 0.75
TUBB3-202ENST00000553656 C19orf44Q9H6X5 657 aa19.71■□□□□ 0.75
TUBB3-202ENST00000553656 RALGAPBQ86X10 1494 aa19.71■□□□□ 0.75
TUBB3-202ENST00000553656 ADGRL3Q9HAR2 1447 aa19.7■□□□□ 0.74
TUBB3-202ENST00000553656 ATF3P18847 181 aa19.7■□□□□ 0.74
TUBB3-202ENST00000553656 WAPLQ7Z5K2 1190 aa19.7■□□□□ 0.74
TUBB3-202ENST00000553656 PRAM1Q96QH2 718 aa19.7■□□□□ 0.74
TUBB3-202ENST00000553656 CADPS2Q86UW7 1296 aa19.68■□□□□ 0.74
TUBB3-202ENST00000553656 PLEKHH1Q9ULM0 1364 aa19.68■□□□□ 0.74
TUBB3-202ENST00000553656 NALCNQ8IZF0 1738 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms