RNA–Protein interactions for RNA: ENST00000553396.1

LINC00517-201, long intergenic non-protein coding RNA 517, humanhuman

TSL 3

Gene LINC00517, Length 774 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-201ENST00000553396 CHGAP10645 457 aaKnown RBP15.34■□□□□ 0.05
LINC00517-201ENST00000553396 STRCP1A6NGW2 1772 aa15.33■□□□□ 0.04
LINC00517-201ENST00000553396 IQSEC2Q5JU85 1478 aa15.32■□□□□ 0.04
LINC00517-201ENST00000553396 CPS1P31327 1500 aa15.31■□□□□ 0.04
LINC00517-201ENST00000553396 CLTCL1P53675 1640 aa15.29■□□□□ 0.04
LINC00517-201ENST00000553396 ZFYVE9O95405 1425 aa15.29■□□□□ 0.04
LINC00517-201ENST00000553396 RIMS2Q9UQ26 1411 aa15.29■□□□□ 0.04
LINC00517-201ENST00000553396 TRPM2O94759 1503 aa15.28■□□□□ 0.04
LINC00517-201ENST00000553396 SLC4A1APQ9BWU0 796 aaKnown RBP15.28■□□□□ 0.04
LINC00517-201ENST00000553396 PPP1R15AO75807 674 aaPredicted RBP15.27■□□□□ 0.04
LINC00517-201ENST00000553396 NUTM2DQ5VT03 806 aaPredicted RBP15.27■□□□□ 0.04
LINC00517-201ENST00000553396 BCANQ96GW7 911 aa15.27■□□□□ 0.04
LINC00517-201ENST00000553396 KIF1BO60333 1816 aa15.27■□□□□ 0.03
LINC00517-201ENST00000553396 SLC26A8Q96RN1 970 aa15.26■□□□□ 0.03
LINC00517-201ENST00000553396 SETD5Q9C0A6 1442 aa15.25■□□□□ 0.03
LINC00517-201ENST00000553396 PLEKHG1Q9ULL1 1385 aa15.24■□□□□ 0.03
LINC00517-201ENST00000553396 LRRC7Q96NW7 1537 aa15.23■□□□□ 0.03
LINC00517-201ENST00000553396 UBAP1LF5GYI3 381 aa15.23■□□□□ 0.03
LINC00517-201ENST00000553396 HDGFP51858 240 aaKnown RBP15.23■□□□□ 0.03
LINC00517-201ENST00000553396 ZNF326Q5BKZ1 582 aaKnown RBP15.22■□□□□ 0.03
LINC00517-201ENST00000553396 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.21■□□□□ 0.03
LINC00517-201ENST00000553396 XIRP1Q702N8 1843 aaKnown RBP15.21■□□□□ 0.03
LINC00517-201ENST00000553396 RAB3GAP2Q9H2M9 1393 aa15.21■□□□□ 0.02
LINC00517-201ENST00000553396 MPHOSPH9Q99550 1183 aa15.2■□□□□ 0.02
LINC00517-201ENST00000553396 NWD1Q149M9 1564 aa15.19■□□□□ 0.02
LINC00517-201ENST00000553396 NEXMIFQ5QGS0 1516 aa15.18■□□□□ 0.02
LINC00517-201ENST00000553396 CHD2O14647 1828 aaKnown RBP15.18■□□□□ 0.02
LINC00517-201ENST00000553396 ADAMTS13Q76LX8 1427 aa15.17■□□□□ 0.02
LINC00517-201ENST00000553396 DIP2AQ14689 1571 aa15.17■□□□□ 0.02
LINC00517-201ENST00000553396 KCNA6P17658 529 aa15.17■□□□□ 0.02
LINC00517-201ENST00000553396 NRXN3Q9Y4C0 1643 aa15.17■□□□□ 0.02
LINC00517-201ENST00000553396 ALKQ9UM73 1620 aa15.16■□□□□ 0.02
LINC00517-201ENST00000553396 CCDC144AA2RUR9 1427 aa15.16■□□□□ 0.02
LINC00517-201ENST00000553396 NKTRP30414 1462 aaKnown RBP15.15■□□□□ 0.02
LINC00517-201ENST00000553396 TOM1O60784 492 aa15.15■□□□□ 0.02
LINC00517-201ENST00000553396 PIP4K2BP78356 416 aa15.15■□□□□ 0.02
LINC00517-201ENST00000553396 RBM33Q96EV2 1170 aaKnown RBP15.15■□□□□ 0.02
LINC00517-201ENST00000553396 SETBP1Q9Y6X0 1596 aa15.15■□□□□ 0.02
LINC00517-201ENST00000553396 TMEM94Q12767 1356 aa15.14■□□□□ 0.01
LINC00517-201ENST00000553396 PPLO60437 1756 aa15.14■□□□□ 0.01
LINC00517-201ENST00000553396 PROSER2Q86WR7 435 aaPredicted RBP15.13■□□□□ 0.01
LINC00517-201ENST00000553396 TBX22Q9Y458 520 aa15.13■□□□□ 0.01
LINC00517-201ENST00000553396 ACIN1Q9UKV3 1341 aaKnown RBP15.13■□□□□ 0.01
LINC00517-201ENST00000553396 PTPRUQ92729 1446 aa15.09■□□□□ 0.01
LINC00517-201ENST00000553396 PIK3R4Q99570 1358 aa15.09■□□□□ 0.01
LINC00517-201ENST00000553396 IFT172Q9UG01 1749 aa15.09■□□□□ 0.01
LINC00517-201ENST00000553396 RGL3Q3MIN7 710 aa15.08■□□□□ 0
LINC00517-201ENST00000553396 SETD1AO15047 1707 aaKnown RBP15.08■□□□□ 0
LINC00517-201ENST00000553396 XRN1Q8IZH2 1706 aaKnown RBP15.08■□□□□ 0
LINC00517-201ENST00000553396 SPATA31E1Q6ZUB1 1445 aa15.08■□□□□ 0
LINC00517-201ENST00000553396 AMOTL2Q9Y2J4 779 aa15.07■□□□□ 0
LINC00517-201ENST00000553396 RPGRIP1LQ68CZ1 1315 aa15.07■□□□□ 0
LINC00517-201ENST00000553396 METP08581 1390 aa15.07■□□□□ 0
LINC00517-201ENST00000553396 VGFO15240 615 aaPredicted RBP15.06■□□□□ 0
LINC00517-201ENST00000553396 HSPA1LP34931 641 aa15.06■□□□□ 0
LINC00517-201ENST00000553396 MSH6P52701 1360 aa15.06■□□□□ 0
LINC00517-201ENST00000553396 C14orf37Q86TY3 774 aa15.05■□□□□ -0
LINC00517-201ENST00000553396 ADGRF5Q8IZF2 1346 aa15.02■□□□□ -0
LINC00517-201ENST00000553396 HRCP23327 699 aa15.02■□□□□ -0
LINC00517-201ENST00000553396 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.02□□□□□ -0.01
LINC00517-201ENST00000553396 ROBO1Q9Y6N7 1651 aa15.02□□□□□ -0.01
LINC00517-201ENST00000553396 ANKRD30BQ9BXX2 1392 aa15.01□□□□□ -0.01
LINC00517-201ENST00000553396 NCOA3Q9Y6Q9 1424 aa15□□□□□ -0.01
LINC00517-201ENST00000553396 NALCNQ8IZF0 1738 aa14.99□□□□□ -0.01
LINC00517-201ENST00000553396 CACNB1Q02641 598 aaPredicted RBP14.98□□□□□ -0.01
LINC00517-201ENST00000553396 PIK3C2GO75747 1445 aa14.98□□□□□ -0.01
LINC00517-201ENST00000553396 FAM135BQ49AJ0 1406 aa14.97□□□□□ -0.01
LINC00517-201ENST00000553396 MYOM2P54296 1465 aa14.96□□□□□ -0.01
LINC00517-201ENST00000553396 PTCH1Q13635 1447 aa14.96□□□□□ -0.01
LINC00517-201ENST00000553396 C19orf44Q9H6X5 657 aa14.96□□□□□ -0.01
LINC00517-201ENST00000553396 SLAIN2Q9P270 581 aa14.96□□□□□ -0.01
LINC00517-201ENST00000553396 ASXL1Q8IXJ9 1541 aa14.96□□□□□ -0.02
LINC00517-201ENST00000553396 ROBO2Q9HCK4 1378 aa14.96□□□□□ -0.02
LINC00517-201ENST00000553396 ATF3P18847 181 aa14.95□□□□□ -0.02
LINC00517-201ENST00000553396 DISP3Q9P2K9 1392 aa14.95□□□□□ -0.02
LINC00517-201ENST00000553396 ADGRL3Q9HAR2 1447 aa14.94□□□□□ -0.02
LINC00517-201ENST00000553396 CADPS2Q86UW7 1296 aa14.94□□□□□ -0.02
LINC00517-201ENST00000553396 NRXN1Q9ULB1 1477 aa14.94□□□□□ -0.02
LINC00517-201ENST00000553396 LAMC1P11047 1609 aa14.93□□□□□ -0.02
LINC00517-201ENST00000553396 PHLPP1O60346 1717 aa14.93□□□□□ -0.02
LINC00517-201ENST00000553396 DCCP43146 1447 aa14.92□□□□□ -0.02
LINC00517-201ENST00000553396 KNDC1Q76NI1 1749 aa14.92□□□□□ -0.02
LINC00517-201ENST00000553396 TMEM132EQ6IEE7 984 aa14.92□□□□□ -0.02
LINC00517-201ENST00000553396 STK26Q9P289 416 aa14.92□□□□□ -0.02
LINC00517-201ENST00000553396 MED1Q15648 1581 aaPredicted RBP14.92□□□□□ -0.02
LINC00517-201ENST00000553396 PRAG1Q86YV5 1406 aa14.92□□□□□ -0.02
LINC00517-201ENST00000553396 DCAF11Q8TEB1 546 aa14.9□□□□□ -0.02
LINC00517-201ENST00000553396 KDM2AQ9Y2K7 1162 aa14.9□□□□□ -0.02
LINC00517-201ENST00000553396 MST1RQ04912 1400 aa14.9□□□□□ -0.02
LINC00517-201ENST00000553396 LRPPRCP42704 1394 aaKnown RBP14.89□□□□□ -0.03
LINC00517-201ENST00000553396 CFAP70Q5T0N1 1121 aa14.89□□□□□ -0.03
LINC00517-201ENST00000553396 TECPR2O15040 1411 aa14.89□□□□□ -0.03
LINC00517-201ENST00000553396 YTHDC2Q9H6S0 1430 aaKnown RBP14.89□□□□□ -0.03
LINC00517-201ENST00000553396 C14orf93Q9H972 538 aaKnown RBP14.88□□□□□ -0.03
LINC00517-201ENST00000553396 COL16A1Q07092 1604 aaPredicted RBP14.88□□□□□ -0.03
LINC00517-201ENST00000553396 DHX57Q6P158 1386 aaKnown RBP14.87□□□□□ -0.03
LINC00517-201ENST00000553396 ABCC11Q96J66 1382 aa14.86□□□□□ -0.03
LINC00517-201ENST00000553396 PLEKHH1Q9ULM0 1364 aa14.86□□□□□ -0.03
LINC00517-201ENST00000553396 AHDC1Q5TGY3 1603 aaPredicted RBP14.86□□□□□ -0.03
LINC00517-201ENST00000553396 TRIM26Q12899 539 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms