RNA–Protein interactions for RNA: ENST00000553338.1

IFT43-204, Transcript of intraflagellar transport 43, humanhuman

TSL 5

Gene IFT43, Length 684 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-204ENST00000553338 ZFYVE9O95405 1425 aa29.57■■■□□ 2.32
IFT43-204ENST00000553338 PPP1R15AO75807 674 aaPredicted RBP29.57■■■□□ 2.32
IFT43-204ENST00000553338 ALKQ9UM73 1620 aa29.56■■■□□ 2.32
IFT43-204ENST00000553338 SENP3Q9H4L4 574 aaPredicted RBP29.56■■■□□ 2.32
IFT43-204ENST00000553338 HDGFP51858 240 aaKnown RBP29.55■■■□□ 2.32
IFT43-204ENST00000553338 HSPA1LP34931 641 aa29.53■■■□□ 2.32
IFT43-204ENST00000553338 NAIPQ13075 1403 aa29.53■■■□□ 2.32
IFT43-204ENST00000553338 PLEKHG1Q9ULL1 1385 aa29.52■■■□□ 2.32
IFT43-204ENST00000553338 KCNA6P17658 529 aa29.51■■■□□ 2.31
IFT43-204ENST00000553338 XIRP1Q702N8 1843 aaKnown RBP29.5■■■□□ 2.31
IFT43-204ENST00000553338 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.49■■■□□ 2.31
IFT43-204ENST00000553338 SPHKAPQ2M3C7 1700 aa29.48■■■□□ 2.31
IFT43-204ENST00000553338 NUTM2DQ5VT03 806 aaPredicted RBP29.46■■■□□ 2.31
IFT43-204ENST00000553338 NWD1Q149M9 1564 aa29.45■■■□□ 2.31
IFT43-204ENST00000553338 TMEM94Q12767 1356 aa29.45■■■□□ 2.31
IFT43-204ENST00000553338 PROSER2Q86WR7 435 aaPredicted RBP29.44■■■□□ 2.3
IFT43-204ENST00000553338 HFM1A2PYH4 1435 aa29.44■■■□□ 2.3
IFT43-204ENST00000553338 NKTRP30414 1462 aaKnown RBP29.43■■■□□ 2.3
IFT43-204ENST00000553338 TRIM52Q96A61 297 aa29.4■■■□□ 2.3
IFT43-204ENST00000553338 RBM33Q96EV2 1170 aaKnown RBP29.4■■■□□ 2.3
IFT43-204ENST00000553338 TBX22Q9Y458 520 aa29.38■■■□□ 2.29
IFT43-204ENST00000553338 CHD2O14647 1828 aaKnown RBP29.37■■■□□ 2.29
IFT43-204ENST00000553338 DIP2AQ14689 1571 aa29.36■■■□□ 2.29
IFT43-204ENST00000553338 ILDR2Q71H61 639 aa29.36■■■□□ 2.29
IFT43-204ENST00000553338 ADAMTS13Q76LX8 1427 aa29.36■■■□□ 2.29
IFT43-204ENST00000553338 TRPM2O94759 1503 aa29.35■■■□□ 2.29
IFT43-204ENST00000553338 ZNF326Q5BKZ1 582 aaKnown RBP29.35■■■□□ 2.29
IFT43-204ENST00000553338 CLTCL1P53675 1640 aa29.34■■■□□ 2.29
IFT43-204ENST00000553338 MED1Q15648 1581 aaPredicted RBP29.3■■■□□ 2.28
IFT43-204ENST00000553338 MSH6P52701 1360 aa29.3■■■□□ 2.28
IFT43-204ENST00000553338 SLC4A1APQ9BWU0 796 aaKnown RBP29.29■■■□□ 2.28
IFT43-204ENST00000553338 PIK3R4Q99570 1358 aa29.28■■■□□ 2.28
IFT43-204ENST00000553338 FAM135BQ49AJ0 1406 aa29.27■■■□□ 2.28
IFT43-204ENST00000553338 KIF1BO60333 1816 aa29.26■■■□□ 2.27
IFT43-204ENST00000553338 SETBP1Q9Y6X0 1596 aa29.24■■■□□ 2.27
IFT43-204ENST00000553338 NRXN3Q9Y4C0 1643 aa29.23■■■□□ 2.27
IFT43-204ENST00000553338 NEXMIFQ5QGS0 1516 aa29.23■■■□□ 2.27
IFT43-204ENST00000553338 ROBO1Q9Y6N7 1651 aa29.22■■■□□ 2.27
IFT43-204ENST00000553338 C14orf37Q86TY3 774 aa29.22■■■□□ 2.27
IFT43-204ENST00000553338 NCOA3Q9Y6Q9 1424 aa29.2■■■□□ 2.27
IFT43-204ENST00000553338 AMOTL2Q9Y2J4 779 aa29.2■■■□□ 2.26
IFT43-204ENST00000553338 PTPRUQ92729 1446 aa29.2■■■□□ 2.26
IFT43-204ENST00000553338 SLAIN2Q9P270 581 aa29.17■■■□□ 2.26
IFT43-204ENST00000553338 FOXD1Q16676 465 aa29.15■■■□□ 2.26
IFT43-204ENST00000553338 PHF23Q9BUL5 403 aaPredicted RBP29.14■■■□□ 2.26
IFT43-204ENST00000553338 XRN1Q8IZH2 1706 aaKnown RBP29.13■■■□□ 2.25
IFT43-204ENST00000553338 METP08581 1390 aa29.13■■■□□ 2.25
IFT43-204ENST00000553338 SOCS7O14512 581 aa29.12■■■□□ 2.25
IFT43-204ENST00000553338 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.11■■■□□ 2.25
IFT43-204ENST00000553338 C19orf44Q9H6X5 657 aa29.11■■■□□ 2.25
IFT43-204ENST00000553338 ATF3P18847 181 aa29.1■■■□□ 2.25
IFT43-204ENST00000553338 VGFO15240 615 aaPredicted RBP29.09■■■□□ 2.25
IFT43-204ENST00000553338 CADPS2Q86UW7 1296 aa29.09■■■□□ 2.25
IFT43-204ENST00000553338 MPHOSPH9Q99550 1183 aa29.09■■■□□ 2.25
IFT43-204ENST00000553338 RPGRIP1LQ68CZ1 1315 aa29.07■■■□□ 2.24
IFT43-204ENST00000553338 CCDC144AA2RUR9 1427 aa29.06■■■□□ 2.24
IFT43-204ENST00000553338 PHLPP1O60346 1717 aa29.06■■■□□ 2.24
IFT43-204ENST00000553338 SETD5Q9C0A6 1442 aa29.04■■■□□ 2.24
IFT43-204ENST00000553338 PPLO60437 1756 aa29.03■■■□□ 2.24
IFT43-204ENST00000553338 ACIN1Q9UKV3 1341 aaKnown RBP29■■■□□ 2.23
IFT43-204ENST00000553338 DCCP43146 1447 aa29■■■□□ 2.23
IFT43-204ENST00000553338 SETD1AO15047 1707 aaKnown RBP28.99■■■□□ 2.23
IFT43-204ENST00000553338 RGL3Q3MIN7 710 aa28.96■■■□□ 2.23
IFT43-204ENST00000553338 COL16A1Q07092 1604 aaPredicted RBP28.95■■■□□ 2.23
IFT43-204ENST00000553338 ADGRL3Q9HAR2 1447 aa28.94■■■□□ 2.22
IFT43-204ENST00000553338 SPATA31E1Q6ZUB1 1445 aa28.94■■■□□ 2.22
IFT43-204ENST00000553338 RAB3GAP2Q9H2M9 1393 aa28.93■■■□□ 2.22
IFT43-204ENST00000553338 JCADQ9P266 1359 aa28.93■■■□□ 2.22
IFT43-204ENST00000553338 NALCNQ8IZF0 1738 aa28.92■■■□□ 2.22
IFT43-204ENST00000553338 AHDC1Q5TGY3 1603 aaPredicted RBP28.92■■■□□ 2.22
IFT43-204ENST00000553338 BRINP3Q76B58 766 aa28.92■■■□□ 2.22
IFT43-204ENST00000553338 PTCH1Q13635 1447 aa28.92■■■□□ 2.22
IFT43-204ENST00000553338 MST1RQ04912 1400 aa28.91■■■□□ 2.22
IFT43-204ENST00000553338 ADGRF5Q8IZF2 1346 aa28.9■■■□□ 2.22
IFT43-204ENST00000553338 IFT172Q9UG01 1749 aa28.89■■■□□ 2.21
IFT43-204ENST00000553338 ANKRD30BQ9BXX2 1392 aa28.88■■■□□ 2.21
IFT43-204ENST00000553338 ROBO2Q9HCK4 1378 aa28.88■■■□□ 2.21
IFT43-204ENST00000553338 ASXL1Q8IXJ9 1541 aa28.88■■■□□ 2.21
IFT43-204ENST00000553338 RGS17Q9UGC6 210 aaPredicted RBP28.87■■■□□ 2.21
IFT43-204ENST00000553338 PRAG1Q86YV5 1406 aa28.86■■■□□ 2.21
IFT43-204ENST00000553338 SHPRHQ149N8 1683 aa28.8■■■□□ 2.2
IFT43-204ENST00000553338 SPATA31A6Q5VVP1 1343 aa28.79■■■□□ 2.2
IFT43-204ENST00000553338 NHSL1Q5SYE7 1610 aa28.79■■■□□ 2.2
IFT43-204ENST00000553338 PIK3C2GO75747 1445 aa28.78■■■□□ 2.2
IFT43-204ENST00000553338 C1orf167Q5SNV9 1468 aa28.78■■■□□ 2.2
IFT43-204ENST00000553338 STK26Q9P289 416 aa28.77■■■□□ 2.2
IFT43-204ENST00000553338 MEX3CQ5U5Q3 659 aaKnown RBP28.75■■■□□ 2.19
IFT43-204ENST00000553338 LRP6O75581 1613 aa28.75■■■□□ 2.19
IFT43-204ENST00000553338 TMEM132EQ6IEE7 984 aa28.74■■■□□ 2.19
IFT43-204ENST00000553338 DDX17Q92841 729 aaKnown RBP28.74■■■□□ 2.19
IFT43-204ENST00000553338 LRPPRCP42704 1394 aaKnown RBP28.74■■■□□ 2.19
IFT43-204ENST00000553338 POTEAQ6S8J7 498 aa28.73■■■□□ 2.19
IFT43-204ENST00000553338 TECPR2O15040 1411 aa28.71■■■□□ 2.19
IFT43-204ENST00000553338 MYOM2P54296 1465 aa28.71■■■□□ 2.19
IFT43-204ENST00000553338 KNDC1Q76NI1 1749 aa28.7■■■□□ 2.19
IFT43-204ENST00000553338 LRRC59Q96AG4 307 aaKnown RBP28.7■■■□□ 2.18
IFT43-204ENST00000553338 WAPLQ7Z5K2 1190 aa28.69■■■□□ 2.18
IFT43-204ENST00000553338 ORAI2Q96SN7 254 aa28.69■■■□□ 2.18
IFT43-204ENST00000553338 CDC42BPGQ6DT37 1551 aa28.69■■■□□ 2.18
IFT43-204ENST00000553338 NRXN1Q9ULB1 1477 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms