RNA–Protein interactions for RNA: ENST00000552656.5

RNF41-211, Transcript of ring finger protein 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF41, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-211ENST00000552656 NKTRP30414 1462 aaKnown RBP16.61■□□□□ 0.25
RNF41-211ENST00000552656 ZFYVE9O95405 1425 aa16.59■□□□□ 0.25
RNF41-211ENST00000552656 GCC2Q8IWJ2 1684 aa16.59■□□□□ 0.25
RNF41-211ENST00000552656 ANKRD30AQ9BXX3 1397 aa16.58■□□□□ 0.24
RNF41-211ENST00000552656 COL16A1Q07092 1604 aaPredicted RBP16.58■□□□□ 0.24
RNF41-211ENST00000552656 TMEM131LA2VDJ0 1609 aa16.56■□□□□ 0.24
RNF41-211ENST00000552656 SLAIN2Q9P270 581 aa16.56■□□□□ 0.24
RNF41-211ENST00000552656 ADGRL2O95490 1459 aa16.55■□□□□ 0.24
RNF41-211ENST00000552656 MSH6P52701 1360 aa16.55■□□□□ 0.24
RNF41-211ENST00000552656 LRP6O75581 1613 aa16.55■□□□□ 0.24
RNF41-211ENST00000552656 SLC52A1Q9NWF4 448 aa16.54■□□□□ 0.24
RNF41-211ENST00000552656 JCADQ9P266 1359 aa16.53■□□□□ 0.24
RNF41-211ENST00000552656 PLEKHG1Q9ULL1 1385 aa16.53■□□□□ 0.24
RNF41-211ENST00000552656 RIMS2Q9UQ26 1411 aa16.53■□□□□ 0.24
RNF41-211ENST00000552656 BCANQ96GW7 911 aa16.52■□□□□ 0.24
RNF41-211ENST00000552656 RPRD2Q5VT52 1461 aaKnown RBP16.52■□□□□ 0.23
RNF41-211ENST00000552656 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.51■□□□□ 0.23
RNF41-211ENST00000552656 ADAMTS13Q76LX8 1427 aa16.5■□□□□ 0.23
RNF41-211ENST00000552656 ANKRD50Q9ULJ7 1429 aa16.49■□□□□ 0.23
RNF41-211ENST00000552656 E9PCH4 1651 aa16.49■□□□□ 0.23
RNF41-211ENST00000552656 TBX22Q9Y458 520 aa16.48■□□□□ 0.23
RNF41-211ENST00000552656 SHPRHQ149N8 1683 aa16.47■□□□□ 0.23
RNF41-211ENST00000552656 NUTM2DQ5VT03 806 aaPredicted RBP16.47■□□□□ 0.23
RNF41-211ENST00000552656 AHDC1Q5TGY3 1603 aaPredicted RBP16.47■□□□□ 0.23
RNF41-211ENST00000552656 UNC13BO14795 1591 aa16.47■□□□□ 0.23
RNF41-211ENST00000552656 DIP2AQ14689 1571 aa16.46■□□□□ 0.23
RNF41-211ENST00000552656 NCOA3Q9Y6Q9 1424 aa16.45■□□□□ 0.22
RNF41-211ENST00000552656 PPP1R15AO75807 674 aaPredicted RBP16.45■□□□□ 0.22
RNF41-211ENST00000552656 APLP2Q06481 763 aa16.45■□□□□ 0.22
RNF41-211ENST00000552656 PTPRUQ92729 1446 aa16.45■□□□□ 0.22
RNF41-211ENST00000552656 FAM50AQ14320 339 aaKnown RBP16.43■□□□□ 0.22
RNF41-211ENST00000552656 UPF1Q92900 1129 aaKnown RBP eCLIP16.43■□□□□ 0.22
RNF41-211ENST00000552656 SPATA31A6Q5VVP1 1343 aa16.43■□□□□ 0.22
RNF41-211ENST00000552656 CHGAP10645 457 aaKnown RBP16.42■□□□□ 0.22
RNF41-211ENST00000552656 TRIM52Q96A61 297 aa16.41■□□□□ 0.22
RNF41-211ENST00000552656 NRXN3Q9Y4C0 1643 aa16.41■□□□□ 0.22
RNF41-211ENST00000552656 HDGFP51858 240 aaKnown RBP16.4■□□□□ 0.22
RNF41-211ENST00000552656 C14orf37Q86TY3 774 aa16.4■□□□□ 0.22
RNF41-211ENST00000552656 C19orf44Q9H6X5 657 aa16.4■□□□□ 0.22
RNF41-211ENST00000552656 IQGAP3Q86VI3 1631 aa16.4■□□□□ 0.22
RNF41-211ENST00000552656 PIK3R4Q99570 1358 aa16.39■□□□□ 0.21
RNF41-211ENST00000552656 BRINP3Q76B58 766 aa16.39■□□□□ 0.21
RNF41-211ENST00000552656 CADPS2Q86UW7 1296 aa16.39■□□□□ 0.21
RNF41-211ENST00000552656 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.39■□□□□ 0.21
RNF41-211ENST00000552656 MEX3CQ5U5Q3 659 aaKnown RBP16.38■□□□□ 0.21
RNF41-211ENST00000552656 ZNF772Q68DY9 489 aaPredicted RBP16.38■□□□□ 0.21
RNF41-211ENST00000552656 AMOTL2Q9Y2J4 779 aa16.38■□□□□ 0.21
RNF41-211ENST00000552656 XRN1Q8IZH2 1706 aaKnown RBP16.38■□□□□ 0.21
RNF41-211ENST00000552656 TRPM2O94759 1503 aa16.38■□□□□ 0.21
RNF41-211ENST00000552656 ATF3P18847 181 aa16.37■□□□□ 0.21
RNF41-211ENST00000552656 NHSL1Q5SYE7 1610 aa16.37■□□□□ 0.21
RNF41-211ENST00000552656 ASXL1Q8IXJ9 1541 aa16.36■□□□□ 0.21
RNF41-211ENST00000552656 NUTM2BA6NNL0 878 aaPredicted RBP16.35■□□□□ 0.21
RNF41-211ENST00000552656 NUTM2EB1AL46 878 aaPredicted RBP16.35■□□□□ 0.21
RNF41-211ENST00000552656 NUTM2AQ8IVF1 878 aaPredicted RBP16.35■□□□□ 0.21
RNF41-211ENST00000552656 MST1RQ04912 1400 aa16.35■□□□□ 0.21
RNF41-211ENST00000552656 RXRBP28702 533 aa16.33■□□□□ 0.2
RNF41-211ENST00000552656 SETD5Q9C0A6 1442 aa16.33■□□□□ 0.2
RNF41-211ENST00000552656 SETBP1Q9Y6X0 1596 aa16.33■□□□□ 0.2
RNF41-211ENST00000552656 DCCP43146 1447 aa16.32■□□□□ 0.2
RNF41-211ENST00000552656 AFF2P51816 1311 aa16.32■□□□□ 0.2
RNF41-211ENST00000552656 DDX17Q92841 729 aaKnown RBP16.32■□□□□ 0.2
RNF41-211ENST00000552656 CDK12Q9NYV4 1490 aaPredicted RBP16.32■□□□□ 0.2
RNF41-211ENST00000552656 NALCNQ8IZF0 1738 aa16.31■□□□□ 0.2
RNF41-211ENST00000552656 METP08581 1390 aa16.31■□□□□ 0.2
RNF41-211ENST00000552656 SPHKAPQ2M3C7 1700 aa16.31■□□□□ 0.2
RNF41-211ENST00000552656 ROCK1Q13464 1354 aa16.3■□□□□ 0.2
RNF41-211ENST00000552656 NUP155O75694 1391 aa16.29■□□□□ 0.2
RNF41-211ENST00000552656 RGS12O14924 1447 aa16.28■□□□□ 0.2
RNF41-211ENST00000552656 PNPLA6Q8IY17 1366 aa16.26■□□□□ 0.19
RNF41-211ENST00000552656 SRCAPQ6ZRS2 3230 aa16.26■□□□□ 0.19
RNF41-211ENST00000552656 NEXMIFQ5QGS0 1516 aa16.25■□□□□ 0.19
RNF41-211ENST00000552656 CLTCL1P53675 1640 aa16.25■□□□□ 0.19
RNF41-211ENST00000552656 ADGRL3Q9HAR2 1447 aa16.25■□□□□ 0.19
RNF41-211ENST00000552656 LRRC59Q96AG4 307 aaKnown RBP16.24■□□□□ 0.19
RNF41-211ENST00000552656 C8orf37Q96NL8 207 aa16.24■□□□□ 0.19
RNF41-211ENST00000552656 LAMC1P11047 1609 aa16.23■□□□□ 0.19
RNF41-211ENST00000552656 QTRT2Q9H974 415 aaKnown RBP16.23■□□□□ 0.19
RNF41-211ENST00000552656 C1orf167Q5SNV9 1468 aa16.22■□□□□ 0.19
RNF41-211ENST00000552656 ITGAEP38570 1179 aa16.21■□□□□ 0.19
RNF41-211ENST00000552656 RBM6P78332 1123 aaKnown RBP16.21■□□□□ 0.19
RNF41-211ENST00000552656 ZNF326Q5BKZ1 582 aaKnown RBP16.21■□□□□ 0.19
RNF41-211ENST00000552656 KIF1BO60333 1816 aa16.18■□□□□ 0.18
RNF41-211ENST00000552656 ADAMTS2O95450 1211 aa16.18■□□□□ 0.18
RNF41-211ENST00000552656 EP400Q96L91 3159 aa16.17■□□□□ 0.18
RNF41-211ENST00000552656 ORAI2Q96SN7 254 aa16.17■□□□□ 0.18
RNF41-211ENST00000552656 ROBO2Q9HCK4 1378 aa16.16■□□□□ 0.18
RNF41-211ENST00000552656 SOS2Q07890 1332 aaPredicted RBP16.16■□□□□ 0.18
RNF41-211ENST00000552656 NGLY1Q96IV0 654 aa16.15■□□□□ 0.18
RNF41-211ENST00000552656 PTCH1Q13635 1447 aa16.14■□□□□ 0.17
RNF41-211ENST00000552656 PPARGC1BQ86YN6 1023 aaKnown RBP16.14■□□□□ 0.17
RNF41-211ENST00000552656 COL22A1Q8NFW1 1626 aaPredicted RBP16.14■□□□□ 0.17
RNF41-211ENST00000552656 USP21Q9UK80 565 aa16.12■□□□□ 0.17
RNF41-211ENST00000552656 ATRNO75882 1429 aa16.11■□□□□ 0.17
RNF41-211ENST00000552656 PRAG1Q86YV5 1406 aa16.11■□□□□ 0.17
RNF41-211ENST00000552656 MARF1Q9Y4F3 1742 aaKnown RBP16.11■□□□□ 0.17
RNF41-211ENST00000552656 FNBP4Q8N3X1 1017 aaPredicted RBP16.11■□□□□ 0.17
RNF41-211ENST00000552656 PPLO60437 1756 aa16.1■□□□□ 0.17
RNF41-211ENST00000552656 ATAD2Q6PL18 1390 aa16.1■□□□□ 0.17
RNF41-211ENST00000552656 MYOM2P54296 1465 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms