RNA–Protein interactions for RNA: ENST00000552483.5

CNOT2-239, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-239ENST00000552483 ZNF335Q9H4Z2 1342 aaPredicted RBP16.18■□□□□ 0.18
CNOT2-239ENST00000552483 NEXMIFQ5QGS0 1516 aa16.15■□□□□ 0.18
CNOT2-239ENST00000552483 NUTM2DQ5VT03 806 aaPredicted RBP16.14■□□□□ 0.17
CNOT2-239ENST00000552483 NRXN3Q9Y4C0 1643 aa16.13■□□□□ 0.17
CNOT2-239ENST00000552483 HRCP23327 699 aa16.13■□□□□ 0.17
CNOT2-239ENST00000552483 PPLO60437 1756 aa16.13■□□□□ 0.17
CNOT2-239ENST00000552483 EID1Q9Y6B2 187 aa16.12■□□□□ 0.17
CNOT2-239ENST00000552483 ACIN1Q9UKV3 1341 aaKnown RBP16.11■□□□□ 0.17
CNOT2-239ENST00000552483 IFT172Q9UG01 1749 aa16.11■□□□□ 0.17
CNOT2-239ENST00000552483 PLEKHG1Q9ULL1 1385 aa16.1■□□□□ 0.17
CNOT2-239ENST00000552483 CCDC144AA2RUR9 1427 aa16.1■□□□□ 0.17
CNOT2-239ENST00000552483 SPATA31E1Q6ZUB1 1445 aa16.1■□□□□ 0.17
CNOT2-239ENST00000552483 TRIM26Q12899 539 aaPredicted RBP16.09■□□□□ 0.17
CNOT2-239ENST00000552483 CERKQ8TCT0 537 aa16.09■□□□□ 0.17
CNOT2-239ENST00000552483 ADAMTS13Q76LX8 1427 aa16.09■□□□□ 0.17
CNOT2-239ENST00000552483 ANKRD30BQ9BXX2 1392 aa16.08■□□□□ 0.16
CNOT2-239ENST00000552483 XIRP1Q702N8 1843 aaKnown RBP16.08■□□□□ 0.16
CNOT2-239ENST00000552483 ZNF326Q5BKZ1 582 aaKnown RBP16.07■□□□□ 0.16
CNOT2-239ENST00000552483 SLC26A8Q96RN1 970 aa16.07■□□□□ 0.16
CNOT2-239ENST00000552483 CHD2O14647 1828 aaKnown RBP16.06■□□□□ 0.16
CNOT2-239ENST00000552483 SETD1AO15047 1707 aaKnown RBP16.06■□□□□ 0.16
CNOT2-239ENST00000552483 NWD1Q149M9 1564 aa16.06■□□□□ 0.16
CNOT2-239ENST00000552483 SETBP1Q9Y6X0 1596 aa16.06■□□□□ 0.16
CNOT2-239ENST00000552483 PPP1R15AO75807 674 aaPredicted RBP16.06■□□□□ 0.16
CNOT2-239ENST00000552483 CPS1P31327 1500 aa16.05■□□□□ 0.16
CNOT2-239ENST00000552483 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.05■□□□□ 0.16
CNOT2-239ENST00000552483 DIP2AQ14689 1571 aa16.04■□□□□ 0.16
CNOT2-239ENST00000552483 LRRC7Q96NW7 1537 aa16.03■□□□□ 0.16
CNOT2-239ENST00000552483 BCANQ96GW7 911 aa16.02■□□□□ 0.16
CNOT2-239ENST00000552483 HDGFP51858 240 aaKnown RBP16.01■□□□□ 0.15
CNOT2-239ENST00000552483 RGL3Q3MIN7 710 aa16.01■□□□□ 0.15
CNOT2-239ENST00000552483 IQSEC2Q5JU85 1478 aa16.01■□□□□ 0.15
CNOT2-239ENST00000552483 PTPRUQ92729 1446 aa16.01■□□□□ 0.15
CNOT2-239ENST00000552483 XRN1Q8IZH2 1706 aaKnown RBP15.99■□□□□ 0.15
CNOT2-239ENST00000552483 DHX57Q6P158 1386 aaKnown RBP15.99■□□□□ 0.15
CNOT2-239ENST00000552483 RPGRIP1LQ68CZ1 1315 aa15.98■□□□□ 0.15
CNOT2-239ENST00000552483 ALKQ9UM73 1620 aa15.98■□□□□ 0.15
CNOT2-239ENST00000552483 ILDR1Q86SU0 546 aaPredicted RBP15.98■□□□□ 0.15
CNOT2-239ENST00000552483 TBX22Q9Y458 520 aa15.98■□□□□ 0.15
CNOT2-239ENST00000552483 ADGRF5Q8IZF2 1346 aa15.97■□□□□ 0.15
CNOT2-239ENST00000552483 KCNA6P17658 529 aa15.97■□□□□ 0.15
CNOT2-239ENST00000552483 METP08581 1390 aa15.97■□□□□ 0.15
CNOT2-239ENST00000552483 ASXL1Q8IXJ9 1541 aa15.96■□□□□ 0.15
CNOT2-239ENST00000552483 FBXO41Q8TF61 875 aa15.96■□□□□ 0.15
CNOT2-239ENST00000552483 NKTRP30414 1462 aaKnown RBP15.96■□□□□ 0.14
CNOT2-239ENST00000552483 MYOM2P54296 1465 aa15.95■□□□□ 0.14
CNOT2-239ENST00000552483 RBM33Q96EV2 1170 aaKnown RBP15.94■□□□□ 0.14
CNOT2-239ENST00000552483 NRXN1Q9ULB1 1477 aa15.94■□□□□ 0.14
CNOT2-239ENST00000552483 PIK3R4Q99570 1358 aa15.93■□□□□ 0.14
CNOT2-239ENST00000552483 VGFO15240 615 aaPredicted RBP15.93■□□□□ 0.14
CNOT2-239ENST00000552483 PIK3C2GO75747 1445 aa15.93■□□□□ 0.14
CNOT2-239ENST00000552483 TMEM94Q12767 1356 aa15.92■□□□□ 0.14
CNOT2-239ENST00000552483 SIN3AQ96ST3 1273 aa15.9■□□□□ 0.14
CNOT2-239ENST00000552483 PCGF6Q9BYE7 350 aa15.9■□□□□ 0.14
CNOT2-239ENST00000552483 PROSER2Q86WR7 435 aaPredicted RBP15.89■□□□□ 0.13
CNOT2-239ENST00000552483 AMOTL2Q9Y2J4 779 aa15.89■□□□□ 0.13
CNOT2-239ENST00000552483 LAMC1P11047 1609 aa15.87■□□□□ 0.13
CNOT2-239ENST00000552483 UBAP1LF5GYI3 381 aa15.87■□□□□ 0.13
CNOT2-239ENST00000552483 KNDC1Q76NI1 1749 aa15.87■□□□□ 0.13
CNOT2-239ENST00000552483 NALCNQ8IZF0 1738 aa15.87■□□□□ 0.13
CNOT2-239ENST00000552483 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.86■□□□□ 0.13
CNOT2-239ENST00000552483 DCAF11Q8TEB1 546 aa15.85■□□□□ 0.13
CNOT2-239ENST00000552483 KDM2AQ9Y2K7 1162 aa15.85■□□□□ 0.13
CNOT2-239ENST00000552483 PRAG1Q86YV5 1406 aa15.85■□□□□ 0.13
CNOT2-239ENST00000552483 ADGRB1O14514 1584 aa15.84■□□□□ 0.13
CNOT2-239ENST00000552483 CFAP70Q5T0N1 1121 aa15.84■□□□□ 0.13
CNOT2-239ENST00000552483 ROBO2Q9HCK4 1378 aa15.84■□□□□ 0.13
CNOT2-239ENST00000552483 TMEM132EQ6IEE7 984 aa15.83■□□□□ 0.12
CNOT2-239ENST00000552483 C14orf93Q9H972 538 aaKnown RBP15.83■□□□□ 0.12
CNOT2-239ENST00000552483 PTCH1Q13635 1447 aa15.83■□□□□ 0.12
CNOT2-239ENST00000552483 LRPPRCP42704 1394 aaKnown RBP15.81■□□□□ 0.12
CNOT2-239ENST00000552483 NEUROD1Q13562 356 aa15.81■□□□□ 0.12
CNOT2-239ENST00000552483 TECPR2O15040 1411 aa15.8■□□□□ 0.12
CNOT2-239ENST00000552483 YTHDC2Q9H6S0 1430 aaKnown RBP15.8■□□□□ 0.12
CNOT2-239ENST00000552483 NCOA3Q9Y6Q9 1424 aa15.8■□□□□ 0.12
CNOT2-239ENST00000552483 PIP4K2BP78356 416 aa15.8■□□□□ 0.12
CNOT2-239ENST00000552483 MSH6P52701 1360 aa15.79■□□□□ 0.12
CNOT2-239ENST00000552483 TOM1O60784 492 aa15.79■□□□□ 0.12
CNOT2-239ENST00000552483 L3MBTL2Q969R5 705 aa15.79■□□□□ 0.12
CNOT2-239ENST00000552483 KIAA1210Q9ULL0 1709 aa15.79■□□□□ 0.12
CNOT2-239ENST00000552483 ADGRL3Q9HAR2 1447 aa15.78■□□□□ 0.12
CNOT2-239ENST00000552483 PLEKHH1Q9ULM0 1364 aa15.78■□□□□ 0.12
CNOT2-239ENST00000552483 STK26Q9P289 416 aa15.78■□□□□ 0.12
CNOT2-239ENST00000552483 ROBO1Q9Y6N7 1651 aa15.78■□□□□ 0.12
CNOT2-239ENST00000552483 SCAF1Q9H7N4 1312 aaKnown RBP15.77■□□□□ 0.12
CNOT2-239ENST00000552483 ABCC11Q96J66 1382 aa15.76■□□□□ 0.11
CNOT2-239ENST00000552483 C14orf37Q86TY3 774 aa15.76■□□□□ 0.11
CNOT2-239ENST00000552483 ARHGEF28Q8N1W1 1705 aaKnown RBP15.76■□□□□ 0.11
CNOT2-239ENST00000552483 TRPM1Q7Z4N2 1603 aa15.76■□□□□ 0.11
CNOT2-239ENST00000552483 DLC1Q96QB1 1528 aa15.74■□□□□ 0.11
CNOT2-239ENST00000552483 WAPLQ7Z5K2 1190 aa15.74■□□□□ 0.11
CNOT2-239ENST00000552483 STAC3Q96MF2 364 aa15.74■□□□□ 0.11
CNOT2-239ENST00000552483 C19orf44Q9H6X5 657 aa15.74■□□□□ 0.11
CNOT2-239ENST00000552483 DCCP43146 1447 aa15.74■□□□□ 0.11
CNOT2-239ENST00000552483 MST1RQ04912 1400 aa15.73■□□□□ 0.11
CNOT2-239ENST00000552483 CDC42BPGQ6DT37 1551 aa15.72■□□□□ 0.11
CNOT2-239ENST00000552483 FAM135BQ49AJ0 1406 aa15.71■□□□□ 0.11
CNOT2-239ENST00000552483 HSPA1LP34931 641 aa15.71■□□□□ 0.11
CNOT2-239ENST00000552483 NBPF1Q3BBV0 1214 aa15.71■□□□□ 0.11
CNOT2-239ENST00000552483 FMN2Q9NZ56 1722 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms