RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 SLAIN2Q9P270 581 aa26.41■■□□□ 1.82
CACNB3-222ENST00000552465 MSH6P52701 1360 aa26.4■■□□□ 1.82
CACNB3-222ENST00000552465 NWD1Q149M9 1564 aa26.38■■□□□ 1.81
CACNB3-222ENST00000552465 HDGFP51858 240 aaKnown RBP26.35■■□□□ 1.81
CACNB3-222ENST00000552465 PLEKHG1Q9ULL1 1385 aa26.34■■□□□ 1.81
CACNB3-222ENST00000552465 ZFYVE9O95405 1425 aa26.34■■□□□ 1.81
CACNB3-222ENST00000552465 ADGRL2O95490 1459 aa26.34■■□□□ 1.81
CACNB3-222ENST00000552465 RPRD2Q5VT52 1461 aaKnown RBP26.33■■□□□ 1.81
CACNB3-222ENST00000552465 JCADQ9P266 1359 aa26.33■■□□□ 1.8
CACNB3-222ENST00000552465 PPP1R15AO75807 674 aaPredicted RBP26.32■■□□□ 1.8
CACNB3-222ENST00000552465 TBX22Q9Y458 520 aa26.31■■□□□ 1.8
CACNB3-222ENST00000552465 ANKRD50Q9ULJ7 1429 aa26.31■■□□□ 1.8
CACNB3-222ENST00000552465 RIMS2Q9UQ26 1411 aa26.31■■□□□ 1.8
CACNB3-222ENST00000552465 FAM50AQ14320 339 aaKnown RBP26.28■■□□□ 1.8
CACNB3-222ENST00000552465 PHLPP1O60346 1717 aa26.26■■□□□ 1.79
CACNB3-222ENST00000552465 NCOA3Q9Y6Q9 1424 aa26.26■■□□□ 1.79
CACNB3-222ENST00000552465 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.25■■□□□ 1.79
CACNB3-222ENST00000552465 CHD2O14647 1828 aaKnown RBP26.24■■□□□ 1.79
CACNB3-222ENST00000552465 CHGAP10645 457 aaKnown RBP26.23■■□□□ 1.79
CACNB3-222ENST00000552465 C14orf37Q86TY3 774 aa26.23■■□□□ 1.79
CACNB3-222ENST00000552465 TMEM131LA2VDJ0 1609 aa26.22■■□□□ 1.79
CACNB3-222ENST00000552465 SPATA31A6Q5VVP1 1343 aa26.2■■□□□ 1.79
CACNB3-222ENST00000552465 NUTM2DQ5VT03 806 aaPredicted RBP26.2■■□□□ 1.78
CACNB3-222ENST00000552465 C19orf44Q9H6X5 657 aa26.2■■□□□ 1.78
CACNB3-222ENST00000552465 ADAMTS13Q76LX8 1427 aa26.2■■□□□ 1.78
CACNB3-222ENST00000552465 COL16A1Q07092 1604 aaPredicted RBP26.19■■□□□ 1.78
CACNB3-222ENST00000552465 CADPS2Q86UW7 1296 aa26.19■■□□□ 1.78
CACNB3-222ENST00000552465 GCC2Q8IWJ2 1684 aa26.19■■□□□ 1.78
CACNB3-222ENST00000552465 MYO5BQ9ULV0 1848 aa26.18■■□□□ 1.78
CACNB3-222ENST00000552465 ATF3P18847 181 aa26.17■■□□□ 1.78
CACNB3-222ENST00000552465 MEX3CQ5U5Q3 659 aaKnown RBP26.16■■□□□ 1.78
CACNB3-222ENST00000552465 LRP6O75581 1613 aa26.16■■□□□ 1.78
CACNB3-222ENST00000552465 PIK3R4Q99570 1358 aa26.16■■□□□ 1.78
CACNB3-222ENST00000552465 ZNF772Q68DY9 489 aaPredicted RBP26.15■■□□□ 1.78
CACNB3-222ENST00000552465 SETD1AO15047 1707 aaKnown RBP26.13■■□□□ 1.77
CACNB3-222ENST00000552465 AMOTL2Q9Y2J4 779 aa26.12■■□□□ 1.77
CACNB3-222ENST00000552465 UNC13BO14795 1591 aa26.11■■□□□ 1.77
CACNB3-222ENST00000552465 DIP2AQ14689 1571 aa26.1■■□□□ 1.77
CACNB3-222ENST00000552465 AHDC1Q5TGY3 1603 aaPredicted RBP26.1■■□□□ 1.77
CACNB3-222ENST00000552465 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.09■■□□□ 1.77
CACNB3-222ENST00000552465 BRINP3Q76B58 766 aa26.08■■□□□ 1.77
CACNB3-222ENST00000552465 UPF1Q92900 1129 aaKnown RBP eCLIP26.08■■□□□ 1.77
CACNB3-222ENST00000552465 TRIM52Q96A61 297 aa26.08■■□□□ 1.77
CACNB3-222ENST00000552465 PTPRUQ92729 1446 aa26.07■■□□□ 1.76
CACNB3-222ENST00000552465 E9PCH4 1651 aa26.07■■□□□ 1.76
CACNB3-222ENST00000552465 ROCK1Q13464 1354 aa26.06■■□□□ 1.76
CACNB3-222ENST00000552465 TRPM2O94759 1503 aa26.04■■□□□ 1.76
CACNB3-222ENST00000552465 NUP155O75694 1391 aa26.04■■□□□ 1.76
CACNB3-222ENST00000552465 NUTM2BA6NNL0 878 aaPredicted RBP26.03■■□□□ 1.76
CACNB3-222ENST00000552465 NUTM2EB1AL46 878 aaPredicted RBP26.03■■□□□ 1.76
CACNB3-222ENST00000552465 RXRBP28702 533 aa26.03■■□□□ 1.76
CACNB3-222ENST00000552465 NUTM2AQ8IVF1 878 aaPredicted RBP26.03■■□□□ 1.76
CACNB3-222ENST00000552465 SHPRHQ149N8 1683 aa26.03■■□□□ 1.76
CACNB3-222ENST00000552465 IQGAP3Q86VI3 1631 aa26.01■■□□□ 1.75
CACNB3-222ENST00000552465 DCCP43146 1447 aa26■■□□□ 1.75
CACNB3-222ENST00000552465 SETD5Q9C0A6 1442 aa25.96■■□□□ 1.75
CACNB3-222ENST00000552465 ASXL1Q8IXJ9 1541 aa25.95■■□□□ 1.74
CACNB3-222ENST00000552465 MST1RQ04912 1400 aa25.95■■□□□ 1.74
CACNB3-222ENST00000552465 AFF2P51816 1311 aa25.94■■□□□ 1.74
CACNB3-222ENST00000552465 LRRC59Q96AG4 307 aaKnown RBP25.94■■□□□ 1.74
CACNB3-222ENST00000552465 CDK12Q9NYV4 1490 aaPredicted RBP25.93■■□□□ 1.74
CACNB3-222ENST00000552465 ZNF326Q5BKZ1 582 aaKnown RBP25.93■■□□□ 1.74
CACNB3-222ENST00000552465 METP08581 1390 aa25.93■■□□□ 1.74
CACNB3-222ENST00000552465 SETBP1Q9Y6X0 1596 aa25.92■■□□□ 1.74
CACNB3-222ENST00000552465 ITGAEP38570 1179 aa25.92■■□□□ 1.74
CACNB3-222ENST00000552465 NRXN3Q9Y4C0 1643 aa25.91■■□□□ 1.74
CACNB3-222ENST00000552465 XRN1Q8IZH2 1706 aaKnown RBP25.91■■□□□ 1.74
CACNB3-222ENST00000552465 DDX17Q92841 729 aaKnown RBP25.88■■□□□ 1.73
CACNB3-222ENST00000552465 C8orf37Q96NL8 207 aa25.86■■□□□ 1.73
CACNB3-222ENST00000552465 QTRT2Q9H974 415 aaKnown RBP25.86■■□□□ 1.73
CACNB3-222ENST00000552465 ADGRL3Q9HAR2 1447 aa25.86■■□□□ 1.73
CACNB3-222ENST00000552465 NHSL1Q5SYE7 1610 aa25.85■■□□□ 1.73
CACNB3-222ENST00000552465 PNPLA6Q8IY17 1366 aa25.84■■□□□ 1.73
CACNB3-222ENST00000552465 RBM6P78332 1123 aaKnown RBP25.84■■□□□ 1.73
CACNB3-222ENST00000552465 SPHKAPQ2M3C7 1700 aa25.79■■□□□ 1.72
CACNB3-222ENST00000552465 RGS12O14924 1447 aa25.79■■□□□ 1.72
CACNB3-222ENST00000552465 NGLY1Q96IV0 654 aa25.78■■□□□ 1.72
CACNB3-222ENST00000552465 C1orf167Q5SNV9 1468 aa25.78■■□□□ 1.72
CACNB3-222ENST00000552465 ADAMTS2O95450 1211 aa25.77■■□□□ 1.72
CACNB3-222ENST00000552465 NEXMIFQ5QGS0 1516 aa25.77■■□□□ 1.72
CACNB3-222ENST00000552465 SOS2Q07890 1332 aaPredicted RBP25.73■■□□□ 1.71
CACNB3-222ENST00000552465 PPARGC1BQ86YN6 1023 aaKnown RBP25.73■■□□□ 1.71
CACNB3-222ENST00000552465 ORAI2Q96SN7 254 aa25.73■■□□□ 1.71
CACNB3-222ENST00000552465 NALCNQ8IZF0 1738 aa25.73■■□□□ 1.71
CACNB3-222ENST00000552465 CLTCL1P53675 1640 aa25.72■■□□□ 1.71
CACNB3-222ENST00000552465 VGFO15240 615 aaPredicted RBP25.71■■□□□ 1.71
CACNB3-222ENST00000552465 ROBO2Q9HCK4 1378 aa25.7■■□□□ 1.71
CACNB3-222ENST00000552465 PTCH1Q13635 1447 aa25.7■■□□□ 1.7
CACNB3-222ENST00000552465 USP21Q9UK80 565 aa25.69■■□□□ 1.7
CACNB3-222ENST00000552465 LAMC1P11047 1609 aa25.67■■□□□ 1.7
CACNB3-222ENST00000552465 FNBP4Q8N3X1 1017 aaPredicted RBP25.66■■□□□ 1.7
CACNB3-222ENST00000552465 TRPC5Q9UL62 973 aaPredicted RBP25.66■■□□□ 1.7
CACNB3-222ENST00000552465 RPGRIP1LQ68CZ1 1315 aa25.64■■□□□ 1.7
CACNB3-222ENST00000552465 ATAD2Q6PL18 1390 aa25.64■■□□□ 1.69
CACNB3-222ENST00000552465 PRAG1Q86YV5 1406 aa25.63■■□□□ 1.69
CACNB3-222ENST00000552465 NAIPQ13075 1403 aa25.61■■□□□ 1.69
CACNB3-222ENST00000552465 KIF1BO60333 1816 aa25.6■■□□□ 1.69
CACNB3-222ENST00000552465 HFM1A2PYH4 1435 aa25.6■■□□□ 1.69
CACNB3-222ENST00000552465 ATRNO75882 1429 aa25.58■■□□□ 1.69
CACNB3-222ENST00000552465 ESCO1Q5FWF5 840 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms