RNA–Protein interactions for RNA: ENST00000552388.1

CDK4-212, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-212ENST00000552388 SLIT1O75093 1534 aa19.39■□□□□ 0.69
CDK4-212ENST00000552388 STRCP1A6NGW2 1772 aa19.39■□□□□ 0.69
CDK4-212ENST00000552388 FOXD1Q16676 465 aa19.38■□□□□ 0.69
CDK4-212ENST00000552388 ARHGAP23Q9P227 1491 aa19.37■□□□□ 0.69
CDK4-212ENST00000552388 STAG3Q9UJ98 1225 aa19.35■□□□□ 0.69
CDK4-212ENST00000552388 TMEM2Q9UHN6 1383 aa19.33■□□□□ 0.69
CDK4-212ENST00000552388 ANKLE2Q86XL3 938 aa19.33■□□□□ 0.68
CDK4-212ENST00000552388 LRRC7Q96NW7 1537 aa19.32■□□□□ 0.68
CDK4-212ENST00000552388 PCGF6Q9BYE7 350 aa19.32■□□□□ 0.68
CDK4-212ENST00000552388 CCDC144AA2RUR9 1427 aa19.32■□□□□ 0.68
CDK4-212ENST00000552388 HSPA1LP34931 641 aa19.31■□□□□ 0.68
CDK4-212ENST00000552388 ANKRD30BQ9BXX2 1392 aa19.31■□□□□ 0.68
CDK4-212ENST00000552388 SCAF11Q99590 1463 aaKnown RBP19.29■□□□□ 0.68
CDK4-212ENST00000552388 ZFYVE9O95405 1425 aa19.29■□□□□ 0.68
CDK4-212ENST00000552388 TOM1O60784 492 aa19.29■□□□□ 0.68
CDK4-212ENST00000552388 CHGAP10645 457 aaKnown RBP19.29■□□□□ 0.68
CDK4-212ENST00000552388 PPLO60437 1756 aa19.27■□□□□ 0.67
CDK4-212ENST00000552388 RIMS2Q9UQ26 1411 aa19.26■□□□□ 0.67
CDK4-212ENST00000552388 IFT172Q9UG01 1749 aa19.26■□□□□ 0.67
CDK4-212ENST00000552388 LTKP29376 864 aa19.26■□□□□ 0.67
CDK4-212ENST00000552388 DHX57Q6P158 1386 aaKnown RBP19.26■□□□□ 0.67
CDK4-212ENST00000552388 SPATA31E1Q6ZUB1 1445 aa19.25■□□□□ 0.67
CDK4-212ENST00000552388 NEXMIFQ5QGS0 1516 aa19.25■□□□□ 0.67
CDK4-212ENST00000552388 TXNDC2Q86VQ3 553 aa19.25■□□□□ 0.67
CDK4-212ENST00000552388 EID1Q9Y6B2 187 aa19.25■□□□□ 0.67
CDK4-212ENST00000552388 XIRP1Q702N8 1843 aaKnown RBP19.24■□□□□ 0.67
CDK4-212ENST00000552388 HDGFP51858 240 aaKnown RBP19.23■□□□□ 0.67
CDK4-212ENST00000552388 ZNF326Q5BKZ1 582 aaKnown RBP19.21■□□□□ 0.67
CDK4-212ENST00000552388 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.21■□□□□ 0.67
CDK4-212ENST00000552388 PIP4K2BP78356 416 aa19.2■□□□□ 0.66
CDK4-212ENST00000552388 RPGRIP1LQ68CZ1 1315 aa19.19■□□□□ 0.66
CDK4-212ENST00000552388 PLEKHG1Q9ULL1 1385 aa19.19■□□□□ 0.66
CDK4-212ENST00000552388 NRXN3Q9Y4C0 1643 aa19.17■□□□□ 0.66
CDK4-212ENST00000552388 PPP1R15AO75807 674 aaPredicted RBP19.16■□□□□ 0.66
CDK4-212ENST00000552388 SETBP1Q9Y6X0 1596 aa19.15■□□□□ 0.66
CDK4-212ENST00000552388 SCAF1Q9H7N4 1312 aaKnown RBP19.15■□□□□ 0.66
CDK4-212ENST00000552388 DIP2AQ14689 1571 aa19.15■□□□□ 0.66
CDK4-212ENST00000552388 RGL3Q3MIN7 710 aa19.14■□□□□ 0.65
CDK4-212ENST00000552388 NUTM2DQ5VT03 806 aaPredicted RBP19.14■□□□□ 0.65
CDK4-212ENST00000552388 NWD1Q149M9 1564 aa19.14■□□□□ 0.65
CDK4-212ENST00000552388 SETD1AO15047 1707 aaKnown RBP19.12■□□□□ 0.65
CDK4-212ENST00000552388 VGFO15240 615 aaPredicted RBP19.12■□□□□ 0.65
CDK4-212ENST00000552388 CHD2O14647 1828 aaKnown RBP19.11■□□□□ 0.65
CDK4-212ENST00000552388 ADAMTS13Q76LX8 1427 aa19.11■□□□□ 0.65
CDK4-212ENST00000552388 MYOM2P54296 1465 aa19.1■□□□□ 0.65
CDK4-212ENST00000552388 FAM135BQ49AJ0 1406 aa19.09■□□□□ 0.65
CDK4-212ENST00000552388 BCANQ96GW7 911 aa19.08■□□□□ 0.64
CDK4-212ENST00000552388 SLC26A8Q96RN1 970 aa19.08■□□□□ 0.64
CDK4-212ENST00000552388 SIN3AQ96ST3 1273 aa19.08■□□□□ 0.64
CDK4-212ENST00000552388 NRXN1Q9ULB1 1477 aa19.08■□□□□ 0.64
CDK4-212ENST00000552388 TBX22Q9Y458 520 aa19.07■□□□□ 0.64
CDK4-212ENST00000552388 NKTRP30414 1462 aaKnown RBP19.07■□□□□ 0.64
CDK4-212ENST00000552388 ADGRF5Q8IZF2 1346 aa19.05■□□□□ 0.64
CDK4-212ENST00000552388 LAMC1P11047 1609 aa19.05■□□□□ 0.64
CDK4-212ENST00000552388 SENP3Q9H4L4 574 aaPredicted RBP19.05■□□□□ 0.64
CDK4-212ENST00000552388 PIK3C2GO75747 1445 aa19.05■□□□□ 0.64
CDK4-212ENST00000552388 STAC3Q96MF2 364 aa19.04■□□□□ 0.64
CDK4-212ENST00000552388 PIK3R4Q99570 1358 aa19.04■□□□□ 0.64
CDK4-212ENST00000552388 RGS17Q9UGC6 210 aaPredicted RBP19.03■□□□□ 0.64
CDK4-212ENST00000552388 CLSPNQ9HAW4 1339 aa19.02■□□□□ 0.64
CDK4-212ENST00000552388 DCAF11Q8TEB1 546 aa19.02■□□□□ 0.64
CDK4-212ENST00000552388 ROBO1Q9Y6N7 1651 aa19.01■□□□□ 0.63
CDK4-212ENST00000552388 XRN1Q8IZH2 1706 aaKnown RBP19.01■□□□□ 0.63
CDK4-212ENST00000552388 NEUROD1Q13562 356 aa19.01■□□□□ 0.63
CDK4-212ENST00000552388 TMEM94Q12767 1356 aa19.01■□□□□ 0.63
CDK4-212ENST00000552388 PHF23Q9BUL5 403 aaPredicted RBP19■□□□□ 0.63
CDK4-212ENST00000552388 KCNA6P17658 529 aa18.99■□□□□ 0.63
CDK4-212ENST00000552388 KIAA1210Q9ULL0 1709 aa18.99■□□□□ 0.63
CDK4-212ENST00000552388 METP08581 1390 aa18.98■□□□□ 0.63
CDK4-212ENST00000552388 ASXL1Q8IXJ9 1541 aa18.97■□□□□ 0.63
CDK4-212ENST00000552388 L3MBTL2Q969R5 705 aa18.97■□□□□ 0.63
CDK4-212ENST00000552388 KDM2AQ9Y2K7 1162 aa18.97■□□□□ 0.63
CDK4-212ENST00000552388 PTPRUQ92729 1446 aa18.97■□□□□ 0.63
CDK4-212ENST00000552388 C14orf93Q9H972 538 aaKnown RBP18.96■□□□□ 0.63
CDK4-212ENST00000552388 KNDC1Q76NI1 1749 aa18.96■□□□□ 0.63
CDK4-212ENST00000552388 CCER1Q8TC90 406 aaPredicted RBP18.94■□□□□ 0.62
CDK4-212ENST00000552388 PRAG1Q86YV5 1406 aa18.93■□□□□ 0.62
CDK4-212ENST00000552388 TONSLQ96HA7 1378 aa18.93■□□□□ 0.62
CDK4-212ENST00000552388 CFAP70Q5T0N1 1121 aa18.92■□□□□ 0.62
CDK4-212ENST00000552388 AMOTL2Q9Y2J4 779 aa18.92■□□□□ 0.62
CDK4-212ENST00000552388 ADGRB1O14514 1584 aa18.91■□□□□ 0.62
CDK4-212ENST00000552388 COL16A1Q07092 1604 aaPredicted RBP18.91■□□□□ 0.62
CDK4-212ENST00000552388 TRPM1Q7Z4N2 1603 aa18.91■□□□□ 0.62
CDK4-212ENST00000552388 NCOA3Q9Y6Q9 1424 aa18.91■□□□□ 0.62
CDK4-212ENST00000552388 PTCH1Q13635 1447 aa18.89■□□□□ 0.61
CDK4-212ENST00000552388 LRPPRCP42704 1394 aaKnown RBP18.88■□□□□ 0.61
CDK4-212ENST00000552388 TECPR2O15040 1411 aa18.88■□□□□ 0.61
CDK4-212ENST00000552388 YTHDC2Q9H6S0 1430 aaKnown RBP18.88■□□□□ 0.61
CDK4-212ENST00000552388 PHLPP1O60346 1717 aa18.87■□□□□ 0.61
CDK4-212ENST00000552388 TMEM132EQ6IEE7 984 aa18.87■□□□□ 0.61
CDK4-212ENST00000552388 PROSER2Q86WR7 435 aaPredicted RBP18.87■□□□□ 0.61
CDK4-212ENST00000552388 MSH6P52701 1360 aa18.85■□□□□ 0.61
CDK4-212ENST00000552388 ABCC11Q96J66 1382 aa18.85■□□□□ 0.61
CDK4-212ENST00000552388 POTEAQ6S8J7 498 aa18.85■□□□□ 0.61
CDK4-212ENST00000552388 TIMELESSQ9UNS1 1208 aa18.85■□□□□ 0.61
CDK4-212ENST00000552388 AHDC1Q5TGY3 1603 aaPredicted RBP18.85■□□□□ 0.61
CDK4-212ENST00000552388 NALCNQ8IZF0 1738 aa18.84■□□□□ 0.61
CDK4-212ENST00000552388 ARHGEF28Q8N1W1 1705 aaKnown RBP18.84■□□□□ 0.61
CDK4-212ENST00000552388 DLC1Q96QB1 1528 aa18.84■□□□□ 0.61
CDK4-212ENST00000552388 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms