RNA–Protein interactions for RNA: ENST00000552282.1

CALCOCO1-220, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-220ENST00000552282 E9PCH4 1651 aa24.95■■□□□ 1.58
CALCOCO1-220ENST00000552282 KCNA6P17658 529 aa24.95■■□□□ 1.58
CALCOCO1-220ENST00000552282 FAM135BQ49AJ0 1406 aa24.95■■□□□ 1.58
CALCOCO1-220ENST00000552282 PLEKHG1Q9ULL1 1385 aa24.93■■□□□ 1.58
CALCOCO1-220ENST00000552282 TMEM94Q12767 1356 aa24.92■■□□□ 1.58
CALCOCO1-220ENST00000552282 CHD2O14647 1828 aaKnown RBP24.91■■□□□ 1.58
CALCOCO1-220ENST00000552282 DIP2AQ14689 1571 aa24.88■■□□□ 1.57
CALCOCO1-220ENST00000552282 RIMS2Q9UQ26 1411 aa24.87■■□□□ 1.57
CALCOCO1-220ENST00000552282 SLC26A8Q96RN1 970 aa24.85■■□□□ 1.57
CALCOCO1-220ENST00000552282 NCOA3Q9Y6Q9 1424 aa24.84■■□□□ 1.57
CALCOCO1-220ENST00000552282 ROBO1Q9Y6N7 1651 aa24.84■■□□□ 1.57
CALCOCO1-220ENST00000552282 HDGFP51858 240 aaKnown RBP24.82■■□□□ 1.56
CALCOCO1-220ENST00000552282 PIK3R4Q99570 1358 aa24.81■■□□□ 1.56
CALCOCO1-220ENST00000552282 ADAMTS13Q76LX8 1427 aa24.8■■□□□ 1.56
CALCOCO1-220ENST00000552282 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.8■■□□□ 1.56
CALCOCO1-220ENST00000552282 TBX22Q9Y458 520 aa24.79■■□□□ 1.56
CALCOCO1-220ENST00000552282 PROSER2Q86WR7 435 aaPredicted RBP24.78■■□□□ 1.56
CALCOCO1-220ENST00000552282 SPHKAPQ2M3C7 1700 aa24.77■■□□□ 1.56
CALCOCO1-220ENST00000552282 MSH6P52701 1360 aa24.77■■□□□ 1.56
CALCOCO1-220ENST00000552282 NUP155O75694 1391 aa24.76■■□□□ 1.55
CALCOCO1-220ENST00000552282 PHF23Q9BUL5 403 aaPredicted RBP24.74■■□□□ 1.55
CALCOCO1-220ENST00000552282 RRBP1Q9P2E9 1410 aaKnown RBP24.74■■□□□ 1.55
CALCOCO1-220ENST00000552282 SETBP1Q9Y6X0 1596 aa24.72■■□□□ 1.55
CALCOCO1-220ENST00000552282 TRPM2O94759 1503 aa24.72■■□□□ 1.55
CALCOCO1-220ENST00000552282 PPP1R15AO75807 674 aaPredicted RBP24.72■■□□□ 1.55
CALCOCO1-220ENST00000552282 NRXN3Q9Y4C0 1643 aa24.71■■□□□ 1.55
CALCOCO1-220ENST00000552282 XRN1Q8IZH2 1706 aaKnown RBP24.69■■□□□ 1.54
CALCOCO1-220ENST00000552282 PHLPP1O60346 1717 aa24.67■■□□□ 1.54
CALCOCO1-220ENST00000552282 COL16A1Q07092 1604 aaPredicted RBP24.67■■□□□ 1.54
CALCOCO1-220ENST00000552282 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.66■■□□□ 1.54
CALCOCO1-220ENST00000552282 BCANQ96GW7 911 aa24.66■■□□□ 1.54
CALCOCO1-220ENST00000552282 SLAIN2Q9P270 581 aa24.66■■□□□ 1.54
CALCOCO1-220ENST00000552282 RGS17Q9UGC6 210 aaPredicted RBP24.66■■□□□ 1.54
CALCOCO1-220ENST00000552282 DCCP43146 1447 aa24.65■■□□□ 1.54
CALCOCO1-220ENST00000552282 RBM33Q96EV2 1170 aaKnown RBP24.65■■□□□ 1.54
CALCOCO1-220ENST00000552282 AHDC1Q5TGY3 1603 aaPredicted RBP24.64■■□□□ 1.54
CALCOCO1-220ENST00000552282 NAIPQ13075 1403 aa24.63■■□□□ 1.53
CALCOCO1-220ENST00000552282 PTPRUQ92729 1446 aa24.62■■□□□ 1.53
CALCOCO1-220ENST00000552282 CLTCL1P53675 1640 aa24.62■■□□□ 1.53
CALCOCO1-220ENST00000552282 SENP3Q9H4L4 574 aaPredicted RBP24.62■■□□□ 1.53
CALCOCO1-220ENST00000552282 CHGAP10645 457 aaKnown RBP24.61■■□□□ 1.53
CALCOCO1-220ENST00000552282 NEXMIFQ5QGS0 1516 aa24.61■■□□□ 1.53
CALCOCO1-220ENST00000552282 JCADQ9P266 1359 aa24.6■■□□□ 1.53
CALCOCO1-220ENST00000552282 CADPS2Q86UW7 1296 aa24.58■■□□□ 1.53
CALCOCO1-220ENST00000552282 C19orf44Q9H6X5 657 aa24.58■■□□□ 1.53
CALCOCO1-220ENST00000552282 ITGAEP38570 1179 aa24.57■■□□□ 1.52
CALCOCO1-220ENST00000552282 HFM1A2PYH4 1435 aa24.57■■□□□ 1.52
CALCOCO1-220ENST00000552282 SHPRHQ149N8 1683 aa24.56■■□□□ 1.52
CALCOCO1-220ENST00000552282 KIF1BO60333 1816 aa24.55■■□□□ 1.52
CALCOCO1-220ENST00000552282 NUTM2DQ5VT03 806 aaPredicted RBP24.54■■□□□ 1.52
CALCOCO1-220ENST00000552282 PRAG1Q86YV5 1406 aa24.53■■□□□ 1.52
CALCOCO1-220ENST00000552282 AMOTL2Q9Y2J4 779 aa24.53■■□□□ 1.52
CALCOCO1-220ENST00000552282 SETD1AO15047 1707 aaKnown RBP24.52■■□□□ 1.52
CALCOCO1-220ENST00000552282 SPATA31A6Q5VVP1 1343 aa24.5■■□□□ 1.51
CALCOCO1-220ENST00000552282 METP08581 1390 aa24.49■■□□□ 1.51
CALCOCO1-220ENST00000552282 NHSL1Q5SYE7 1610 aa24.49■■□□□ 1.51
CALCOCO1-220ENST00000552282 ATF3P18847 181 aa24.48■■□□□ 1.51
CALCOCO1-220ENST00000552282 LRP6O75581 1613 aa24.47■■□□□ 1.51
CALCOCO1-220ENST00000552282 ASXL1Q8IXJ9 1541 aa24.47■■□□□ 1.51
CALCOCO1-220ENST00000552282 MST1RQ04912 1400 aa24.47■■□□□ 1.51
CALCOCO1-220ENST00000552282 ADGRL3Q9HAR2 1447 aa24.47■■□□□ 1.51
CALCOCO1-220ENST00000552282 POTEAQ6S8J7 498 aa24.47■■□□□ 1.51
CALCOCO1-220ENST00000552282 PPARGC1BQ86YN6 1023 aaKnown RBP24.47■■□□□ 1.51
CALCOCO1-220ENST00000552282 PTCH1Q13635 1447 aa24.46■■□□□ 1.51
CALCOCO1-220ENST00000552282 C14orf37Q86TY3 774 aa24.46■■□□□ 1.51
CALCOCO1-220ENST00000552282 NALCNQ8IZF0 1738 aa24.46■■□□□ 1.51
CALCOCO1-220ENST00000552282 BRINP3Q76B58 766 aa24.44■■□□□ 1.5
CALCOCO1-220ENST00000552282 SETD5Q9C0A6 1442 aa24.44■■□□□ 1.5
CALCOCO1-220ENST00000552282 LAMC1P11047 1609 aa24.43■■□□□ 1.5
CALCOCO1-220ENST00000552282 ZNF326Q5BKZ1 582 aaKnown RBP24.42■■□□□ 1.5
CALCOCO1-220ENST00000552282 PPLO60437 1756 aa24.42■■□□□ 1.5
CALCOCO1-220ENST00000552282 RPGRIP1LQ68CZ1 1315 aa24.39■■□□□ 1.5
CALCOCO1-220ENST00000552282 VGFO15240 615 aaPredicted RBP24.35■■□□□ 1.49
CALCOCO1-220ENST00000552282 SLC4A1APQ9BWU0 796 aaKnown RBP24.31■■□□□ 1.48
CALCOCO1-220ENST00000552282 IFT172Q9UG01 1749 aa24.31■■□□□ 1.48
CALCOCO1-220ENST00000552282 C1orf167Q5SNV9 1468 aa24.31■■□□□ 1.48
CALCOCO1-220ENST00000552282 ZNF772Q68DY9 489 aaPredicted RBP24.3■■□□□ 1.48
CALCOCO1-220ENST00000552282 ROBO2Q9HCK4 1378 aa24.29■■□□□ 1.48
CALCOCO1-220ENST00000552282 CDK12Q9NYV4 1490 aaPredicted RBP24.29■■□□□ 1.48
CALCOCO1-220ENST00000552282 CDC42BPGQ6DT37 1551 aa24.28■■□□□ 1.48
CALCOCO1-220ENST00000552282 SPATA31E1Q6ZUB1 1445 aa24.27■■□□□ 1.48
CALCOCO1-220ENST00000552282 TRIM52Q96A61 297 aa24.27■■□□□ 1.48
CALCOCO1-220ENST00000552282 TECPR2O15040 1411 aa24.27■■□□□ 1.48
CALCOCO1-220ENST00000552282 LRRC59Q96AG4 307 aaKnown RBP24.26■■□□□ 1.47
CALCOCO1-220ENST00000552282 PNPLA6Q8IY17 1366 aa24.26■■□□□ 1.47
CALCOCO1-220ENST00000552282 KNDC1Q76NI1 1749 aa24.24■■□□□ 1.47
CALCOCO1-220ENST00000552282 CCDC144AA2RUR9 1427 aa24.24■■□□□ 1.47
CALCOCO1-220ENST00000552282 MEX3CQ5U5Q3 659 aaKnown RBP24.23■■□□□ 1.47
CALCOCO1-220ENST00000552282 ACIN1Q9UKV3 1341 aaKnown RBP24.22■■□□□ 1.47
CALCOCO1-220ENST00000552282 COL22A1Q8NFW1 1626 aaPredicted RBP24.21■■□□□ 1.47
CALCOCO1-220ENST00000552282 ANKRD30BQ9BXX2 1392 aa24.21■■□□□ 1.47
CALCOCO1-220ENST00000552282 SOS2Q07890 1332 aaPredicted RBP24.2■■□□□ 1.46
CALCOCO1-220ENST00000552282 PIK3C2GO75747 1445 aa24.18■■□□□ 1.46
CALCOCO1-220ENST00000552282 LRPPRCP42704 1394 aaKnown RBP24.15■■□□□ 1.46
CALCOCO1-220ENST00000552282 ABCC11Q96J66 1382 aa24.15■■□□□ 1.46
CALCOCO1-220ENST00000552282 AFF2P51816 1311 aa24.14■■□□□ 1.46
CALCOCO1-220ENST00000552282 ADGRF5Q8IZF2 1346 aa24.14■■□□□ 1.46
CALCOCO1-220ENST00000552282 MPHOSPH9Q99550 1183 aa24.14■■□□□ 1.45
CALCOCO1-220ENST00000552282 NRXN1Q9ULB1 1477 aa24.13■■□□□ 1.45
CALCOCO1-220ENST00000552282 DDX17Q92841 729 aaKnown RBP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms