RNA–Protein interactions for RNA: ENST00000552231.5

CNOT2-236, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 1,545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-236ENST00000552231 RIMS2Q9UQ26 1411 aa26.3■■□□□ 1.8
CNOT2-236ENST00000552231 TMEM131LA2VDJ0 1609 aa26.3■■□□□ 1.8
CNOT2-236ENST00000552231 ALKQ9UM73 1620 aa26.3■■□□□ 1.8
CNOT2-236ENST00000552231 PLEKHG1Q9ULL1 1385 aa26.3■■□□□ 1.8
CNOT2-236ENST00000552231 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.29■■□□□ 1.8
CNOT2-236ENST00000552231 NAIPQ13075 1403 aa26.29■■□□□ 1.8
CNOT2-236ENST00000552231 HSPA1LP34931 641 aa26.29■■□□□ 1.8
CNOT2-236ENST00000552231 CHGAP10645 457 aaKnown RBP26.28■■□□□ 1.8
CNOT2-236ENST00000552231 PPP1R15AO75807 674 aaPredicted RBP26.26■■□□□ 1.79
CNOT2-236ENST00000552231 BCANQ96GW7 911 aa26.26■■□□□ 1.79
CNOT2-236ENST00000552231 TBX22Q9Y458 520 aa26.22■■□□□ 1.79
CNOT2-236ENST00000552231 TMEM94Q12767 1356 aa26.21■■□□□ 1.79
CNOT2-236ENST00000552231 HFM1A2PYH4 1435 aa26.2■■□□□ 1.79
CNOT2-236ENST00000552231 PROSER2Q86WR7 435 aaPredicted RBP26.2■■□□□ 1.79
CNOT2-236ENST00000552231 MYO5BQ9ULV0 1848 aa26.19■■□□□ 1.78
CNOT2-236ENST00000552231 NKTRP30414 1462 aaKnown RBP26.19■■□□□ 1.78
CNOT2-236ENST00000552231 NWD1Q149M9 1564 aa26.18■■□□□ 1.78
CNOT2-236ENST00000552231 SENP3Q9H4L4 574 aaPredicted RBP26.15■■□□□ 1.78
CNOT2-236ENST00000552231 XIRP1Q702N8 1843 aaKnown RBP26.15■■□□□ 1.78
CNOT2-236ENST00000552231 NUTM2DQ5VT03 806 aaPredicted RBP26.14■■□□□ 1.78
CNOT2-236ENST00000552231 ADAMTS13Q76LX8 1427 aa26.14■■□□□ 1.77
CNOT2-236ENST00000552231 ILDR2Q71H61 639 aa26.14■■□□□ 1.77
CNOT2-236ENST00000552231 TRIM52Q96A61 297 aa26.12■■□□□ 1.77
CNOT2-236ENST00000552231 PIK3R4Q99570 1358 aa26.12■■□□□ 1.77
CNOT2-236ENST00000552231 SPHKAPQ2M3C7 1700 aa26.12■■□□□ 1.77
CNOT2-236ENST00000552231 FAM135BQ49AJ0 1406 aa26.11■■□□□ 1.77
CNOT2-236ENST00000552231 RBM33Q96EV2 1170 aaKnown RBP26.1■■□□□ 1.77
CNOT2-236ENST00000552231 DIP2AQ14689 1571 aa26.1■■□□□ 1.77
CNOT2-236ENST00000552231 HRCP23327 699 aa26.09■■□□□ 1.77
CNOT2-236ENST00000552231 TRPM2O94759 1503 aa26.08■■□□□ 1.77
CNOT2-236ENST00000552231 NCOA3Q9Y6Q9 1424 aa26.08■■□□□ 1.77
CNOT2-236ENST00000552231 ZNF326Q5BKZ1 582 aaKnown RBP26.08■■□□□ 1.77
CNOT2-236ENST00000552231 CHD2O14647 1828 aaKnown RBP26.07■■□□□ 1.76
CNOT2-236ENST00000552231 MSH6P52701 1360 aa26.06■■□□□ 1.76
CNOT2-236ENST00000552231 SLC4A1APQ9BWU0 796 aaKnown RBP26.06■■□□□ 1.76
CNOT2-236ENST00000552231 CLTCL1P53675 1640 aa26.02■■□□□ 1.76
CNOT2-236ENST00000552231 MED1Q15648 1581 aaPredicted RBP26■■□□□ 1.75
CNOT2-236ENST00000552231 AMOTL2Q9Y2J4 779 aa26■■□□□ 1.75
CNOT2-236ENST00000552231 SETBP1Q9Y6X0 1596 aa26■■□□□ 1.75
CNOT2-236ENST00000552231 SLAIN2Q9P270 581 aa25.99■■□□□ 1.75
CNOT2-236ENST00000552231 PTPRUQ92729 1446 aa25.99■■□□□ 1.75
CNOT2-236ENST00000552231 NEXMIFQ5QGS0 1516 aa25.96■■□□□ 1.75
CNOT2-236ENST00000552231 SOCS7O14512 581 aa25.96■■□□□ 1.75
CNOT2-236ENST00000552231 C19orf44Q9H6X5 657 aa25.96■■□□□ 1.75
CNOT2-236ENST00000552231 NRXN3Q9Y4C0 1643 aa25.95■■□□□ 1.74
CNOT2-236ENST00000552231 RPGRIP1LQ68CZ1 1315 aa25.94■■□□□ 1.74
CNOT2-236ENST00000552231 ACIN1Q9UKV3 1341 aaKnown RBP25.94■■□□□ 1.74
CNOT2-236ENST00000552231 VGFO15240 615 aaPredicted RBP25.93■■□□□ 1.74
CNOT2-236ENST00000552231 C14orf37Q86TY3 774 aa25.93■■□□□ 1.74
CNOT2-236ENST00000552231 ROBO1Q9Y6N7 1651 aa25.92■■□□□ 1.74
CNOT2-236ENST00000552231 CADPS2Q86UW7 1296 aa25.92■■□□□ 1.74
CNOT2-236ENST00000552231 METP08581 1390 aa25.92■■□□□ 1.74
CNOT2-236ENST00000552231 MPHOSPH9Q99550 1183 aa25.91■■□□□ 1.74
CNOT2-236ENST00000552231 KIF1BO60333 1816 aa25.9■■□□□ 1.74
CNOT2-236ENST00000552231 ATF3P18847 181 aa25.89■■□□□ 1.74
CNOT2-236ENST00000552231 FOXD1Q16676 465 aa25.89■■□□□ 1.74
CNOT2-236ENST00000552231 PHF23Q9BUL5 403 aaPredicted RBP25.88■■□□□ 1.73
CNOT2-236ENST00000552231 XRN1Q8IZH2 1706 aaKnown RBP25.86■■□□□ 1.73
CNOT2-236ENST00000552231 DCCP43146 1447 aa25.85■■□□□ 1.73
CNOT2-236ENST00000552231 SETD5Q9C0A6 1442 aa25.84■■□□□ 1.73
CNOT2-236ENST00000552231 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.83■■□□□ 1.73
CNOT2-236ENST00000552231 CCDC144AA2RUR9 1427 aa25.83■■□□□ 1.73
CNOT2-236ENST00000552231 SPATA31E1Q6ZUB1 1445 aa25.77■■□□□ 1.72
CNOT2-236ENST00000552231 JCADQ9P266 1359 aa25.77■■□□□ 1.72
CNOT2-236ENST00000552231 PRAG1Q86YV5 1406 aa25.76■■□□□ 1.71
CNOT2-236ENST00000552231 ADGRL3Q9HAR2 1447 aa25.76■■□□□ 1.71
CNOT2-236ENST00000552231 BRINP3Q76B58 766 aa25.75■■□□□ 1.71
CNOT2-236ENST00000552231 PTCH1Q13635 1447 aa25.75■■□□□ 1.71
CNOT2-236ENST00000552231 PHLPP1O60346 1717 aa25.74■■□□□ 1.71
CNOT2-236ENST00000552231 RGL3Q3MIN7 710 aa25.74■■□□□ 1.71
CNOT2-236ENST00000552231 ANKRD30BQ9BXX2 1392 aa25.74■■□□□ 1.71
CNOT2-236ENST00000552231 RGS17Q9UGC6 210 aaPredicted RBP25.73■■□□□ 1.71
CNOT2-236ENST00000552231 PPLO60437 1756 aa25.73■■□□□ 1.71
CNOT2-236ENST00000552231 MST1RQ04912 1400 aa25.73■■□□□ 1.71
CNOT2-236ENST00000552231 RAB3GAP2Q9H2M9 1393 aa25.72■■□□□ 1.71
CNOT2-236ENST00000552231 AHDC1Q5TGY3 1603 aaPredicted RBP25.72■■□□□ 1.71
CNOT2-236ENST00000552231 ADGRF5Q8IZF2 1346 aa25.72■■□□□ 1.71
CNOT2-236ENST00000552231 SETD1AO15047 1707 aaKnown RBP25.72■■□□□ 1.71
CNOT2-236ENST00000552231 COL16A1Q07092 1604 aaPredicted RBP25.71■■□□□ 1.71
CNOT2-236ENST00000552231 ROBO2Q9HCK4 1378 aa25.71■■□□□ 1.71
CNOT2-236ENST00000552231 ZEB1P37275 1124 aaPredicted RBP25.69■■□□□ 1.7
CNOT2-236ENST00000552231 SPATA31A6Q5VVP1 1343 aa25.66■■□□□ 1.7
CNOT2-236ENST00000552231 ASXL1Q8IXJ9 1541 aa25.65■■□□□ 1.7
CNOT2-236ENST00000552231 NALCNQ8IZF0 1738 aa25.63■■□□□ 1.69
CNOT2-236ENST00000552231 PIK3C2GO75747 1445 aa25.62■■□□□ 1.69
CNOT2-236ENST00000552231 C1orf167Q5SNV9 1468 aa25.61■■□□□ 1.69
CNOT2-236ENST00000552231 LRPPRCP42704 1394 aaKnown RBP25.6■■□□□ 1.69
CNOT2-236ENST00000552231 IFT172Q9UG01 1749 aa25.6■■□□□ 1.69
CNOT2-236ENST00000552231 ABCC11Q96J66 1382 aa25.59■■□□□ 1.69
CNOT2-236ENST00000552231 TECPR2O15040 1411 aa25.59■■□□□ 1.69
CNOT2-236ENST00000552231 POTEAQ6S8J7 498 aa25.58■■□□□ 1.69
CNOT2-236ENST00000552231 LRRC59Q96AG4 307 aaKnown RBP25.58■■□□□ 1.69
CNOT2-236ENST00000552231 TMEM132EQ6IEE7 984 aa25.56■■□□□ 1.68
CNOT2-236ENST00000552231 C14orf93Q9H972 538 aaKnown RBP25.56■■□□□ 1.68
CNOT2-236ENST00000552231 STK26Q9P289 416 aa25.56■■□□□ 1.68
CNOT2-236ENST00000552231 SHPRHQ149N8 1683 aa25.56■■□□□ 1.68
CNOT2-236ENST00000552231 NHSL1Q5SYE7 1610 aa25.55■■□□□ 1.68
CNOT2-236ENST00000552231 NRXN1Q9ULB1 1477 aa25.55■■□□□ 1.68
CNOT2-236ENST00000552231 LRP6O75581 1613 aa25.54■■□□□ 1.68
CNOT2-236ENST00000552231 DDX17Q92841 729 aaKnown RBP25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms