RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 NWD1Q149M9 1564 aa33.73■■■□□ 2.99
SMARCD1-212ENST00000551966 NKTRP30414 1462 aaKnown RBP33.72■■■□□ 2.99
SMARCD1-212ENST00000551966 FAM50AQ14320 339 aaKnown RBP33.71■■■□□ 2.99
SMARCD1-212ENST00000551966 SLAIN2Q9P270 581 aa33.71■■■□□ 2.99
SMARCD1-212ENST00000551966 ZFYVE9O95405 1425 aa33.7■■■□□ 2.99
SMARCD1-212ENST00000551966 ANKRD50Q9ULJ7 1429 aa33.7■■■□□ 2.99
SMARCD1-212ENST00000551966 RPRD2Q5VT52 1461 aaKnown RBP33.69■■■□□ 2.98
SMARCD1-212ENST00000551966 MSH6P52701 1360 aa33.68■■■□□ 2.98
SMARCD1-212ENST00000551966 PLEKHG1Q9ULL1 1385 aa33.67■■■□□ 2.98
SMARCD1-212ENST00000551966 RIMS2Q9UQ26 1411 aa33.65■■■□□ 2.98
SMARCD1-212ENST00000551966 MYO5BQ9ULV0 1848 aa33.65■■■□□ 2.98
SMARCD1-212ENST00000551966 CHD2O14647 1828 aaKnown RBP33.63■■■□□ 2.97
SMARCD1-212ENST00000551966 HDGFP51858 240 aaKnown RBP33.63■■■□□ 2.97
SMARCD1-212ENST00000551966 TBX22Q9Y458 520 aa33.63■■■□□ 2.97
SMARCD1-212ENST00000551966 TMEM131LA2VDJ0 1609 aa33.61■■■□□ 2.97
SMARCD1-212ENST00000551966 PPP1R15AO75807 674 aaPredicted RBP33.61■■■□□ 2.97
SMARCD1-212ENST00000551966 GCC2Q8IWJ2 1684 aa33.58■■■□□ 2.97
SMARCD1-212ENST00000551966 PHLPP1O60346 1717 aa33.56■■■□□ 2.96
SMARCD1-212ENST00000551966 CHGAP10645 457 aaKnown RBP33.56■■■□□ 2.96
SMARCD1-212ENST00000551966 NUTM2DQ5VT03 806 aaPredicted RBP33.56■■■□□ 2.96
SMARCD1-212ENST00000551966 JCADQ9P266 1359 aa33.55■■■□□ 2.96
SMARCD1-212ENST00000551966 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.53■■■□□ 2.96
SMARCD1-212ENST00000551966 ADAMTS13Q76LX8 1427 aa33.53■■■□□ 2.96
SMARCD1-212ENST00000551966 NCOA3Q9Y6Q9 1424 aa33.52■■■□□ 2.96
SMARCD1-212ENST00000551966 UNC13BO14795 1591 aa33.49■■■□□ 2.95
SMARCD1-212ENST00000551966 E9PCH4 1651 aa33.47■■■□□ 2.95
SMARCD1-212ENST00000551966 COL16A1Q07092 1604 aaPredicted RBP33.46■■■□□ 2.95
SMARCD1-212ENST00000551966 C14orf37Q86TY3 774 aa33.46■■■□□ 2.95
SMARCD1-212ENST00000551966 C19orf44Q9H6X5 657 aa33.45■■■□□ 2.95
SMARCD1-212ENST00000551966 CADPS2Q86UW7 1296 aa33.42■■■□□ 2.94
SMARCD1-212ENST00000551966 PIK3R4Q99570 1358 aa33.41■■■□□ 2.94
SMARCD1-212ENST00000551966 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.41■■■□□ 2.94
SMARCD1-212ENST00000551966 LRP6O75581 1613 aa33.4■■■□□ 2.94
SMARCD1-212ENST00000551966 ROCK1Q13464 1354 aa33.4■■■□□ 2.94
SMARCD1-212ENST00000551966 AMOTL2Q9Y2J4 779 aa33.4■■■□□ 2.94
SMARCD1-212ENST00000551966 PTPRUQ92729 1446 aa33.38■■■□□ 2.93
SMARCD1-212ENST00000551966 SPATA31A6Q5VVP1 1343 aa33.38■■■□□ 2.93
SMARCD1-212ENST00000551966 ATF3P18847 181 aa33.38■■■□□ 2.93
SMARCD1-212ENST00000551966 SETD1AO15047 1707 aaKnown RBP33.37■■■□□ 2.93
SMARCD1-212ENST00000551966 IQGAP3Q86VI3 1631 aa33.37■■■□□ 2.93
SMARCD1-212ENST00000551966 DIP2AQ14689 1571 aa33.37■■■□□ 2.93
SMARCD1-212ENST00000551966 NUP155O75694 1391 aa33.36■■■□□ 2.93
SMARCD1-212ENST00000551966 AHDC1Q5TGY3 1603 aaPredicted RBP33.33■■■□□ 2.93
SMARCD1-212ENST00000551966 BRINP3Q76B58 766 aa33.32■■■□□ 2.92
SMARCD1-212ENST00000551966 MEX3CQ5U5Q3 659 aaKnown RBP33.31■■■□□ 2.92
SMARCD1-212ENST00000551966 TRPM2O94759 1503 aa33.3■■■□□ 2.92
SMARCD1-212ENST00000551966 ZNF772Q68DY9 489 aaPredicted RBP33.29■■■□□ 2.92
SMARCD1-212ENST00000551966 ITGAEP38570 1179 aa33.28■■■□□ 2.92
SMARCD1-212ENST00000551966 SHPRHQ149N8 1683 aa33.26■■■□□ 2.91
SMARCD1-212ENST00000551966 TRIM52Q96A61 297 aa33.23■■■□□ 2.91
SMARCD1-212ENST00000551966 NRXN3Q9Y4C0 1643 aa33.23■■■□□ 2.91
SMARCD1-212ENST00000551966 UPF1Q92900 1129 aaKnown RBP eCLIP33.22■■■□□ 2.91
SMARCD1-212ENST00000551966 NUTM2BA6NNL0 878 aaPredicted RBP33.21■■■□□ 2.91
SMARCD1-212ENST00000551966 NUTM2EB1AL46 878 aaPredicted RBP33.21■■■□□ 2.91
SMARCD1-212ENST00000551966 NUTM2AQ8IVF1 878 aaPredicted RBP33.21■■■□□ 2.91
SMARCD1-212ENST00000551966 METP08581 1390 aa33.2■■■□□ 2.9
SMARCD1-212ENST00000551966 DCCP43146 1447 aa33.19■■■□□ 2.9
SMARCD1-212ENST00000551966 XRN1Q8IZH2 1706 aaKnown RBP33.18■■■□□ 2.9
SMARCD1-212ENST00000551966 SETBP1Q9Y6X0 1596 aa33.17■■■□□ 2.9
SMARCD1-212ENST00000551966 ZNF326Q5BKZ1 582 aaKnown RBP33.17■■■□□ 2.9
SMARCD1-212ENST00000551966 MST1RQ04912 1400 aa33.17■■■□□ 2.9
SMARCD1-212ENST00000551966 RXRBP28702 533 aa33.16■■■□□ 2.9
SMARCD1-212ENST00000551966 PPARGC1BQ86YN6 1023 aaKnown RBP33.15■■■□□ 2.9
SMARCD1-212ENST00000551966 ASXL1Q8IXJ9 1541 aa33.15■■■□□ 2.9
SMARCD1-212ENST00000551966 SETD5Q9C0A6 1442 aa33.14■■■□□ 2.9
SMARCD1-212ENST00000551966 DDX17Q92841 729 aaKnown RBP33.12■■■□□ 2.89
SMARCD1-212ENST00000551966 SPHKAPQ2M3C7 1700 aa33.11■■■□□ 2.89
SMARCD1-212ENST00000551966 LRRC59Q96AG4 307 aaKnown RBP33.1■■■□□ 2.89
SMARCD1-212ENST00000551966 AFF2P51816 1311 aa33.09■■■□□ 2.89
SMARCD1-212ENST00000551966 NHSL1Q5SYE7 1610 aa33.06■■■□□ 2.88
SMARCD1-212ENST00000551966 ADGRL3Q9HAR2 1447 aa33.03■■■□□ 2.88
SMARCD1-212ENST00000551966 NEXMIFQ5QGS0 1516 aa33.03■■■□□ 2.88
SMARCD1-212ENST00000551966 CDK12Q9NYV4 1490 aaPredicted RBP33.02■■■□□ 2.88
SMARCD1-212ENST00000551966 CLTCL1P53675 1640 aa33.01■■■□□ 2.87
SMARCD1-212ENST00000551966 PNPLA6Q8IY17 1366 aa33■■■□□ 2.87
SMARCD1-212ENST00000551966 C8orf37Q96NL8 207 aa32.99■■■□□ 2.87
SMARCD1-212ENST00000551966 QTRT2Q9H974 415 aaKnown RBP32.98■■■□□ 2.87
SMARCD1-212ENST00000551966 NALCNQ8IZF0 1738 aa32.97■■■□□ 2.87
SMARCD1-212ENST00000551966 C1orf167Q5SNV9 1468 aa32.95■■■□□ 2.87
SMARCD1-212ENST00000551966 RBM6P78332 1123 aaKnown RBP32.92■■■□□ 2.86
SMARCD1-212ENST00000551966 ORAI2Q96SN7 254 aa32.92■■■□□ 2.86
SMARCD1-212ENST00000551966 ROBO2Q9HCK4 1378 aa32.9■■■□□ 2.86
SMARCD1-212ENST00000551966 NAIPQ13075 1403 aa32.9■■■□□ 2.86
SMARCD1-212ENST00000551966 RGS12O14924 1447 aa32.89■■■□□ 2.86
SMARCD1-212ENST00000551966 VGFO15240 615 aaPredicted RBP32.89■■■□□ 2.86
SMARCD1-212ENST00000551966 KIF1BO60333 1816 aa32.88■■■□□ 2.85
SMARCD1-212ENST00000551966 ADAMTS2O95450 1211 aa32.88■■■□□ 2.85
SMARCD1-212ENST00000551966 NGLY1Q96IV0 654 aa32.88■■■□□ 2.85
SMARCD1-212ENST00000551966 SOS2Q07890 1332 aaPredicted RBP32.87■■■□□ 2.85
SMARCD1-212ENST00000551966 PTCH1Q13635 1447 aa32.85■■■□□ 2.85
SMARCD1-212ENST00000551966 LAMC1P11047 1609 aa32.84■■■□□ 2.85
SMARCD1-212ENST00000551966 RRBP1Q9P2E9 1410 aaKnown RBP32.82■■■□□ 2.84
SMARCD1-212ENST00000551966 RPGRIP1LQ68CZ1 1315 aa32.8■■■□□ 2.84
SMARCD1-212ENST00000551966 PRAG1Q86YV5 1406 aa32.78■■■□□ 2.84
SMARCD1-212ENST00000551966 USP21Q9UK80 565 aa32.77■■■□□ 2.84
SMARCD1-212ENST00000551966 FNBP4Q8N3X1 1017 aaPredicted RBP32.75■■■□□ 2.83
SMARCD1-212ENST00000551966 SLC4A1APQ9BWU0 796 aaKnown RBP32.73■■■□□ 2.83
SMARCD1-212ENST00000551966 HFM1A2PYH4 1435 aa32.73■■■□□ 2.83
SMARCD1-212ENST00000551966 TRPC5Q9UL62 973 aaPredicted RBP32.71■■■□□ 2.83
SMARCD1-212ENST00000551966 PPLO60437 1756 aa32.68■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms