RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 ANKRD30BQ9BXX2 1392 aa24.18■■□□□ 1.46
GCN1-209ENST00000551920 KIF1BO60333 1816 aa24.18■■□□□ 1.46
GCN1-209ENST00000551920 NEXMIFQ5QGS0 1516 aa24.18■■□□□ 1.46
GCN1-209ENST00000551920 SPATA31E1Q6ZUB1 1445 aa24.17■■□□□ 1.46
GCN1-209ENST00000551920 LTBP4Q8N2S1 1624 aa24.17■■□□□ 1.46
GCN1-209ENST00000551920 ZNF335Q9H4Z2 1342 aaPredicted RBP24.15■■□□□ 1.46
GCN1-209ENST00000551920 NUTM2DQ5VT03 806 aaPredicted RBP24.15■■□□□ 1.46
GCN1-209ENST00000551920 PLEKHG1Q9ULL1 1385 aa24.14■■□□□ 1.45
GCN1-209ENST00000551920 ZNF326Q5BKZ1 582 aaKnown RBP24.11■■□□□ 1.45
GCN1-209ENST00000551920 SENP3Q9H4L4 574 aaPredicted RBP24.11■■□□□ 1.45
GCN1-209ENST00000551920 PPP1R15AO75807 674 aaPredicted RBP24.1■■□□□ 1.45
GCN1-209ENST00000551920 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.09■■□□□ 1.45
GCN1-209ENST00000551920 NRXN3Q9Y4C0 1643 aa24.09■■□□□ 1.45
GCN1-209ENST00000551920 ADAMTS13Q76LX8 1427 aa24.08■■□□□ 1.44
GCN1-209ENST00000551920 STRCP1A6NGW2 1772 aa24.06■■□□□ 1.44
GCN1-209ENST00000551920 PPLO60437 1756 aa24.06■■□□□ 1.44
GCN1-209ENST00000551920 SLC26A8Q96RN1 970 aa24.06■■□□□ 1.44
GCN1-209ENST00000551920 SETBP1Q9Y6X0 1596 aa24.06■■□□□ 1.44
GCN1-209ENST00000551920 DHX57Q6P158 1386 aaKnown RBP24.05■■□□□ 1.44
GCN1-209ENST00000551920 HDGFP51858 240 aaKnown RBP24.05■■□□□ 1.44
GCN1-209ENST00000551920 IFT172Q9UG01 1749 aa24.04■■□□□ 1.44
GCN1-209ENST00000551920 DIP2AQ14689 1571 aa24.03■■□□□ 1.44
GCN1-209ENST00000551920 RGL3Q3MIN7 710 aa24.02■■□□□ 1.44
GCN1-209ENST00000551920 RPGRIP1LQ68CZ1 1315 aa24.02■■□□□ 1.44
GCN1-209ENST00000551920 PCGF6Q9BYE7 350 aa24.01■■□□□ 1.43
GCN1-209ENST00000551920 CPS1P31327 1500 aa24■■□□□ 1.43
GCN1-209ENST00000551920 NWD1Q149M9 1564 aa23.99■■□□□ 1.43
GCN1-209ENST00000551920 CERKQ8TCT0 537 aa23.99■■□□□ 1.43
GCN1-209ENST00000551920 BCANQ96GW7 911 aa23.99■■□□□ 1.43
GCN1-209ENST00000551920 ADGRF5Q8IZF2 1346 aa23.96■■□□□ 1.43
GCN1-209ENST00000551920 TBX22Q9Y458 520 aa23.96■■□□□ 1.43
GCN1-209ENST00000551920 SETD1AO15047 1707 aaKnown RBP23.96■■□□□ 1.43
GCN1-209ENST00000551920 VGFO15240 615 aaPredicted RBP23.95■■□□□ 1.42
GCN1-209ENST00000551920 LRRC7Q96NW7 1537 aa23.94■■□□□ 1.42
GCN1-209ENST00000551920 MYOM2P54296 1465 aa23.94■■□□□ 1.42
GCN1-209ENST00000551920 PTPRUQ92729 1446 aa23.93■■□□□ 1.42
GCN1-209ENST00000551920 NRXN1Q9ULB1 1477 aa23.93■■□□□ 1.42
GCN1-209ENST00000551920 PIK3C2GO75747 1445 aa23.93■■□□□ 1.42
GCN1-209ENST00000551920 METP08581 1390 aa23.92■■□□□ 1.42
GCN1-209ENST00000551920 IQSEC2Q5JU85 1478 aa23.92■■□□□ 1.42
GCN1-209ENST00000551920 ALKQ9UM73 1620 aa23.92■■□□□ 1.42
GCN1-209ENST00000551920 KCNA6P17658 529 aa23.91■■□□□ 1.42
GCN1-209ENST00000551920 NKTRP30414 1462 aaKnown RBP23.91■■□□□ 1.42
GCN1-209ENST00000551920 CHD2O14647 1828 aaKnown RBP23.91■■□□□ 1.42
GCN1-209ENST00000551920 PIK3R4Q99570 1358 aa23.91■■□□□ 1.42
GCN1-209ENST00000551920 XRN1Q8IZH2 1706 aaKnown RBP23.9■■□□□ 1.42
GCN1-209ENST00000551920 ASXL1Q8IXJ9 1541 aa23.88■■□□□ 1.41
GCN1-209ENST00000551920 SIN3AQ96ST3 1273 aa23.87■■□□□ 1.41
GCN1-209ENST00000551920 XIRP1Q702N8 1843 aaKnown RBP23.86■■□□□ 1.41
GCN1-209ENST00000551920 TMEM94Q12767 1356 aa23.83■■□□□ 1.41
GCN1-209ENST00000551920 DCAF11Q8TEB1 546 aa23.82■■□□□ 1.4
GCN1-209ENST00000551920 RBM33Q96EV2 1170 aaKnown RBP23.82■■□□□ 1.4
GCN1-209ENST00000551920 AMOTL2Q9Y2J4 779 aa23.8■■□□□ 1.4
GCN1-209ENST00000551920 PRAG1Q86YV5 1406 aa23.79■■□□□ 1.4
GCN1-209ENST00000551920 LAMC1P11047 1609 aa23.79■■□□□ 1.4
GCN1-209ENST00000551920 FBXO41Q8TF61 875 aa23.78■■□□□ 1.4
GCN1-209ENST00000551920 KDM2AQ9Y2K7 1162 aa23.78■■□□□ 1.4
GCN1-209ENST00000551920 NEUROD1Q13562 356 aa23.77■■□□□ 1.4
GCN1-209ENST00000551920 PROSER2Q86WR7 435 aaPredicted RBP23.77■■□□□ 1.4
GCN1-209ENST00000551920 CFAP70Q5T0N1 1121 aa23.76■■□□□ 1.39
GCN1-209ENST00000551920 C14orf93Q9H972 538 aaKnown RBP23.76■■□□□ 1.39
GCN1-209ENST00000551920 PTCH1Q13635 1447 aa23.76■■□□□ 1.39
GCN1-209ENST00000551920 ADGRB1O14514 1584 aa23.75■■□□□ 1.39
GCN1-209ENST00000551920 L3MBTL2Q969R5 705 aa23.74■■□□□ 1.39
GCN1-209ENST00000551920 ROBO2Q9HCK4 1378 aa23.74■■□□□ 1.39
GCN1-209ENST00000551920 TMEM132EQ6IEE7 984 aa23.73■■□□□ 1.39
GCN1-209ENST00000551920 ILDR1Q86SU0 546 aaPredicted RBP23.73■■□□□ 1.39
GCN1-209ENST00000551920 STAC3Q96MF2 364 aa23.72■■□□□ 1.39
GCN1-209ENST00000551920 LRPPRCP42704 1394 aaKnown RBP23.72■■□□□ 1.39
GCN1-209ENST00000551920 TECPR2O15040 1411 aa23.72■■□□□ 1.39
GCN1-209ENST00000551920 UBAP1LF5GYI3 381 aa23.71■■□□□ 1.39
GCN1-209ENST00000551920 KNDC1Q76NI1 1749 aa23.7■■□□□ 1.39
GCN1-209ENST00000551920 YTHDC2Q9H6S0 1430 aaKnown RBP23.7■■□□□ 1.38
GCN1-209ENST00000551920 NCOA3Q9Y6Q9 1424 aa23.69■■□□□ 1.38
GCN1-209ENST00000551920 NALCNQ8IZF0 1738 aa23.67■■□□□ 1.38
GCN1-209ENST00000551920 ABCC11Q96J66 1382 aa23.66■■□□□ 1.38
GCN1-209ENST00000551920 STK26Q9P289 416 aa23.66■■□□□ 1.38
GCN1-209ENST00000551920 MSH6P52701 1360 aa23.65■■□□□ 1.38
GCN1-209ENST00000551920 ADGRL3Q9HAR2 1447 aa23.65■■□□□ 1.38
GCN1-209ENST00000551920 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.64■■□□□ 1.38
GCN1-209ENST00000551920 KIAA1210Q9ULL0 1709 aa23.64■■□□□ 1.37
GCN1-209ENST00000551920 PLEKHH1Q9ULM0 1364 aa23.64■■□□□ 1.37
GCN1-209ENST00000551920 TOM1O60784 492 aa23.62■■□□□ 1.37
GCN1-209ENST00000551920 TONSLQ96HA7 1378 aa23.62■■□□□ 1.37
GCN1-209ENST00000551920 DLC1Q96QB1 1528 aa23.61■■□□□ 1.37
GCN1-209ENST00000551920 C14orf37Q86TY3 774 aa23.61■■□□□ 1.37
GCN1-209ENST00000551920 CLSPNQ9HAW4 1339 aa23.6■■□□□ 1.37
GCN1-209ENST00000551920 DCCP43146 1447 aa23.6■■□□□ 1.37
GCN1-209ENST00000551920 FAM135BQ49AJ0 1406 aa23.59■■□□□ 1.37
GCN1-209ENST00000551920 TRPM1Q7Z4N2 1603 aa23.59■■□□□ 1.37
GCN1-209ENST00000551920 PIP4K2BP78356 416 aa23.59■■□□□ 1.37
GCN1-209ENST00000551920 WAPLQ7Z5K2 1190 aa23.59■■□□□ 1.37
GCN1-209ENST00000551920 C19orf44Q9H6X5 657 aa23.59■■□□□ 1.37
GCN1-209ENST00000551920 NBPF1Q3BBV0 1214 aa23.58■■□□□ 1.37
GCN1-209ENST00000551920 NBPF8Q3BBV2 869 aa23.57■■□□□ 1.36
GCN1-209ENST00000551920 CCER1Q8TC90 406 aaPredicted RBP23.55■■□□□ 1.36
GCN1-209ENST00000551920 ARHGEF28Q8N1W1 1705 aaKnown RBP23.55■■□□□ 1.36
GCN1-209ENST00000551920 SCAF1Q9H7N4 1312 aaKnown RBP23.55■■□□□ 1.36
GCN1-209ENST00000551920 CDC42BPGQ6DT37 1551 aa23.54■■□□□ 1.36
GCN1-209ENST00000551920 TRAK1Q9UPV9 953 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms