RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 ZFYVE9O95405 1425 aa27.65■■■□□ 2.02
PRPF40B-215ENST00000551418 GCC2Q8IWJ2 1684 aa27.65■■■□□ 2.02
PRPF40B-215ENST00000551418 PPARGC1BQ86YN6 1023 aaKnown RBP27.64■■■□□ 2.02
PRPF40B-215ENST00000551418 UNC13BO14795 1591 aa27.63■■■□□ 2.01
PRPF40B-215ENST00000551418 TMEM131LA2VDJ0 1609 aa27.63■■■□□ 2.01
PRPF40B-215ENST00000551418 FAM135BQ49AJ0 1406 aa27.62■■■□□ 2.01
PRPF40B-215ENST00000551418 RIMS2Q9UQ26 1411 aa27.61■■■□□ 2.01
PRPF40B-215ENST00000551418 RGS17Q9UGC6 210 aaPredicted RBP27.61■■■□□ 2.01
PRPF40B-215ENST00000551418 E9PCH4 1651 aa27.61■■■□□ 2.01
PRPF40B-215ENST00000551418 NWD1Q149M9 1564 aa27.6■■■□□ 2.01
PRPF40B-215ENST00000551418 NUTM2DQ5VT03 806 aaPredicted RBP27.6■■■□□ 2.01
PRPF40B-215ENST00000551418 CHGAP10645 457 aaKnown RBP27.59■■■□□ 2.01
PRPF40B-215ENST00000551418 ITGAEP38570 1179 aa27.59■■■□□ 2.01
PRPF40B-215ENST00000551418 PLEKHG1Q9ULL1 1385 aa27.58■■■□□ 2.01
PRPF40B-215ENST00000551418 ROBO1Q9Y6N7 1651 aa27.57■■■□□ 2
PRPF40B-215ENST00000551418 CHD2O14647 1828 aaKnown RBP27.57■■■□□ 2
PRPF40B-215ENST00000551418 PPP1R15AO75807 674 aaPredicted RBP27.56■■■□□ 2
PRPF40B-215ENST00000551418 ROCK1Q13464 1354 aa27.56■■■□□ 2
PRPF40B-215ENST00000551418 NKTRP30414 1462 aaKnown RBP27.56■■■□□ 2
PRPF40B-215ENST00000551418 IQGAP3Q86VI3 1631 aa27.52■■■□□ 2
PRPF40B-215ENST00000551418 NUP155O75694 1391 aa27.5■■□□□ 1.99
PRPF40B-215ENST00000551418 TBX22Q9Y458 520 aa27.5■■□□□ 1.99
PRPF40B-215ENST00000551418 MSH6P52701 1360 aa27.49■■□□□ 1.99
PRPF40B-215ENST00000551418 HDGFP51858 240 aaKnown RBP27.49■■□□□ 1.99
PRPF40B-215ENST00000551418 SLAIN2Q9P270 581 aa27.49■■□□□ 1.99
PRPF40B-215ENST00000551418 ADAMTS13Q76LX8 1427 aa27.49■■□□□ 1.99
PRPF40B-215ENST00000551418 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.46■■□□□ 1.99
PRPF40B-215ENST00000551418 POTEAQ6S8J7 498 aa27.42■■□□□ 1.98
PRPF40B-215ENST00000551418 PHLPP1O60346 1717 aa27.41■■□□□ 1.98
PRPF40B-215ENST00000551418 PTPRUQ92729 1446 aa27.39■■□□□ 1.97
PRPF40B-215ENST00000551418 C14orf37Q86TY3 774 aa27.37■■□□□ 1.97
PRPF40B-215ENST00000551418 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.36■■□□□ 1.97
PRPF40B-215ENST00000551418 AMOTL2Q9Y2J4 779 aa27.35■■□□□ 1.97
PRPF40B-215ENST00000551418 DIP2AQ14689 1571 aa27.35■■□□□ 1.97
PRPF40B-215ENST00000551418 NCOA3Q9Y6Q9 1424 aa27.33■■□□□ 1.97
PRPF40B-215ENST00000551418 PIK3R4Q99570 1358 aa27.33■■□□□ 1.97
PRPF40B-215ENST00000551418 SPHKAPQ2M3C7 1700 aa27.33■■□□□ 1.96
PRPF40B-215ENST00000551418 COL16A1Q07092 1604 aaPredicted RBP27.32■■□□□ 1.96
PRPF40B-215ENST00000551418 NRXN3Q9Y4C0 1643 aa27.32■■□□□ 1.96
PRPF40B-215ENST00000551418 C19orf44Q9H6X5 657 aa27.32■■□□□ 1.96
PRPF40B-215ENST00000551418 TRPM2O94759 1503 aa27.31■■□□□ 1.96
PRPF40B-215ENST00000551418 JCADQ9P266 1359 aa27.3■■□□□ 1.96
PRPF40B-215ENST00000551418 ZNF326Q5BKZ1 582 aaKnown RBP27.28■■□□□ 1.96
PRPF40B-215ENST00000551418 ATF3P18847 181 aa27.27■■□□□ 1.96
PRPF40B-215ENST00000551418 CADPS2Q86UW7 1296 aa27.27■■□□□ 1.96
PRPF40B-215ENST00000551418 METP08581 1390 aa27.25■■□□□ 1.95
PRPF40B-215ENST00000551418 CLTCL1P53675 1640 aa27.24■■□□□ 1.95
PRPF40B-215ENST00000551418 SETBP1Q9Y6X0 1596 aa27.24■■□□□ 1.95
PRPF40B-215ENST00000551418 LRP6O75581 1613 aa27.23■■□□□ 1.95
PRPF40B-215ENST00000551418 XRN1Q8IZH2 1706 aaKnown RBP27.23■■□□□ 1.95
PRPF40B-215ENST00000551418 BRINP3Q76B58 766 aa27.22■■□□□ 1.95
PRPF40B-215ENST00000551418 NAIPQ13075 1403 aa27.22■■□□□ 1.95
PRPF40B-215ENST00000551418 RRBP1Q9P2E9 1410 aaKnown RBP27.22■■□□□ 1.95
PRPF40B-215ENST00000551418 AHDC1Q5TGY3 1603 aaPredicted RBP27.21■■□□□ 1.95
PRPF40B-215ENST00000551418 NEXMIFQ5QGS0 1516 aa27.19■■□□□ 1.94
PRPF40B-215ENST00000551418 SETD1AO15047 1707 aaKnown RBP27.17■■□□□ 1.94
PRPF40B-215ENST00000551418 SPATA31A6Q5VVP1 1343 aa27.15■■□□□ 1.94
PRPF40B-215ENST00000551418 SHPRHQ149N8 1683 aa27.14■■□□□ 1.93
PRPF40B-215ENST00000551418 MST1RQ04912 1400 aa27.13■■□□□ 1.93
PRPF40B-215ENST00000551418 KIF1BO60333 1816 aa27.13■■□□□ 1.93
PRPF40B-215ENST00000551418 MEX3CQ5U5Q3 659 aaKnown RBP27.12■■□□□ 1.93
PRPF40B-215ENST00000551418 DDX17Q92841 729 aaKnown RBP27.12■■□□□ 1.93
PRPF40B-215ENST00000551418 TRIM52Q96A61 297 aa27.12■■□□□ 1.93
PRPF40B-215ENST00000551418 ASXL1Q8IXJ9 1541 aa27.11■■□□□ 1.93
PRPF40B-215ENST00000551418 DCCP43146 1447 aa27.11■■□□□ 1.93
PRPF40B-215ENST00000551418 NUTM2BA6NNL0 878 aaPredicted RBP27.1■■□□□ 1.93
PRPF40B-215ENST00000551418 NUTM2EB1AL46 878 aaPredicted RBP27.1■■□□□ 1.93
PRPF40B-215ENST00000551418 NUTM2AQ8IVF1 878 aaPredicted RBP27.1■■□□□ 1.93
PRPF40B-215ENST00000551418 NALCNQ8IZF0 1738 aa27.08■■□□□ 1.93
PRPF40B-215ENST00000551418 ADGRL3Q9HAR2 1447 aa27.06■■□□□ 1.92
PRPF40B-215ENST00000551418 HFM1A2PYH4 1435 aa27.05■■□□□ 1.92
PRPF40B-215ENST00000551418 NHSL1Q5SYE7 1610 aa27.05■■□□□ 1.92
PRPF40B-215ENST00000551418 FOXD1Q16676 465 aa27.04■■□□□ 1.92
PRPF40B-215ENST00000551418 SLC4A1APQ9BWU0 796 aaKnown RBP27.03■■□□□ 1.92
PRPF40B-215ENST00000551418 SETD5Q9C0A6 1442 aa27.03■■□□□ 1.92
PRPF40B-215ENST00000551418 ROBO2Q9HCK4 1378 aa27.02■■□□□ 1.92
PRPF40B-215ENST00000551418 ZNF772Q68DY9 489 aaPredicted RBP27.02■■□□□ 1.92
PRPF40B-215ENST00000551418 VGFO15240 615 aaPredicted RBP27■■□□□ 1.91
PRPF40B-215ENST00000551418 LRRC59Q96AG4 307 aaKnown RBP26.97■■□□□ 1.91
PRPF40B-215ENST00000551418 C1orf167Q5SNV9 1468 aa26.97■■□□□ 1.91
PRPF40B-215ENST00000551418 PPLO60437 1756 aa26.97■■□□□ 1.91
PRPF40B-215ENST00000551418 ORAI2Q96SN7 254 aa26.96■■□□□ 1.91
PRPF40B-215ENST00000551418 AFF2P51816 1311 aa26.95■■□□□ 1.91
PRPF40B-215ENST00000551418 PNPLA6Q8IY17 1366 aa26.95■■□□□ 1.9
PRPF40B-215ENST00000551418 RPGRIP1LQ68CZ1 1315 aa26.94■■□□□ 1.9
PRPF40B-215ENST00000551418 PTCH1Q13635 1447 aa26.94■■□□□ 1.9
PRPF40B-215ENST00000551418 RXRBP28702 533 aa26.93■■□□□ 1.9
PRPF40B-215ENST00000551418 UPF1Q92900 1129 aaKnown RBP eCLIP26.91■■□□□ 1.9
PRPF40B-215ENST00000551418 ADGRF5Q8IZF2 1346 aa26.9■■□□□ 1.9
PRPF40B-215ENST00000551418 C8orf37Q96NL8 207 aa26.9■■□□□ 1.9
PRPF40B-215ENST00000551418 RGL3Q3MIN7 710 aa26.88■■□□□ 1.89
PRPF40B-215ENST00000551418 PRAG1Q86YV5 1406 aa26.87■■□□□ 1.89
PRPF40B-215ENST00000551418 LAMC1P11047 1609 aa26.87■■□□□ 1.89
PRPF40B-215ENST00000551418 ADAMTS2O95450 1211 aa26.86■■□□□ 1.89
PRPF40B-215ENST00000551418 SOS2Q07890 1332 aaPredicted RBP26.86■■□□□ 1.89
PRPF40B-215ENST00000551418 QTRT2Q9H974 415 aaKnown RBP26.84■■□□□ 1.89
PRPF40B-215ENST00000551418 MPHOSPH9Q99550 1183 aa26.83■■□□□ 1.89
PRPF40B-215ENST00000551418 STK26Q9P289 416 aa26.83■■□□□ 1.89
PRPF40B-215ENST00000551418 SPATA31E1Q6ZUB1 1445 aa26.82■■□□□ 1.88
PRPF40B-215ENST00000551418 WAPLQ7Z5K2 1190 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms