RNA–Protein interactions for RNA: ENST00000550228.5

GPN3-207, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 353 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-207ENST00000550228 UHRF1BP1Q6BDS2 1440 aa11.64□□□□□ -0.55
GPN3-207ENST00000550228 RIMS2Q9UQ26 1411 aa11.64□□□□□ -0.55
GPN3-207ENST00000550228 NBPF8Q3BBV2 869 aa11.64□□□□□ -0.55
GPN3-207ENST00000550228 MYOM2P54296 1465 aa11.63□□□□□ -0.55
GPN3-207ENST00000550228 RPGRIP1LQ68CZ1 1315 aa11.63□□□□□ -0.55
GPN3-207ENST00000550228 PRAG1Q86YV5 1406 aa11.63□□□□□ -0.55
GPN3-207ENST00000550228 SENP3Q9H4L4 574 aaPredicted RBP11.63□□□□□ -0.55
GPN3-207ENST00000550228 ADGRF5Q8IZF2 1346 aa11.62□□□□□ -0.55
GPN3-207ENST00000550228 TRPM1Q7Z4N2 1603 aa11.61□□□□□ -0.55
GPN3-207ENST00000550228 TMEM2Q9UHN6 1383 aa11.61□□□□□ -0.55
GPN3-207ENST00000550228 ZFYVE9O95405 1425 aa11.6□□□□□ -0.55
GPN3-207ENST00000550228 THEMISQ8N1K5 641 aaPredicted RBP11.6□□□□□ -0.55
GPN3-207ENST00000550228 RALGAPBQ86X10 1494 aa11.59□□□□□ -0.55
GPN3-207ENST00000550228 NRXN1Q9ULB1 1477 aa11.59□□□□□ -0.55
GPN3-207ENST00000550228 VGFO15240 615 aaPredicted RBP11.59□□□□□ -0.55
GPN3-207ENST00000550228 STAC3Q96MF2 364 aa11.59□□□□□ -0.55
GPN3-207ENST00000550228 SLIT1O75093 1534 aa11.59□□□□□ -0.55
GPN3-207ENST00000550228 ARHGAP23Q9P227 1491 aa11.58□□□□□ -0.56
GPN3-207ENST00000550228 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.58□□□□□ -0.56
GPN3-207ENST00000550228 PIK3C2GO75747 1445 aa11.58□□□□□ -0.56
GPN3-207ENST00000550228 IQGAP1P46940 1657 aa11.58□□□□□ -0.56
GPN3-207ENST00000550228 KIAA1210Q9ULL0 1709 aa11.57□□□□□ -0.56
GPN3-207ENST00000550228 ROCK2O75116 1388 aaKnown RBP11.57□□□□□ -0.56
GPN3-207ENST00000550228 HDGFP51858 240 aaKnown RBP11.57□□□□□ -0.56
GPN3-207ENST00000550228 TXNDC2Q86VQ3 553 aa11.57□□□□□ -0.56
GPN3-207ENST00000550228 BCANQ96GW7 911 aa11.57□□□□□ -0.56
GPN3-207ENST00000550228 EID1Q9Y6B2 187 aa11.57□□□□□ -0.56
GPN3-207ENST00000550228 LTKP29376 864 aa11.56□□□□□ -0.56
GPN3-207ENST00000550228 CFAP70Q5T0N1 1121 aa11.56□□□□□ -0.56
GPN3-207ENST00000550228 LAMC1P11047 1609 aa11.56□□□□□ -0.56
GPN3-207ENST00000550228 SCAF11Q99590 1463 aaKnown RBP11.56□□□□□ -0.56
GPN3-207ENST00000550228 POLR1AO95602 1720 aaPredicted RBP11.55□□□□□ -0.56
GPN3-207ENST00000550228 NBPF1Q3BBV0 1214 aa11.55□□□□□ -0.56
GPN3-207ENST00000550228 AEBP2Q6ZN18 517 aaPredicted RBP11.55□□□□□ -0.56
GPN3-207ENST00000550228 NRXN3Q9Y4C0 1643 aa11.55□□□□□ -0.56
GPN3-207ENST00000550228 ALKQ9UM73 1620 aa11.54□□□□□ -0.56
GPN3-207ENST00000550228 HSPA2P54652 639 aa11.54□□□□□ -0.56
GPN3-207ENST00000550228 CARD11Q9BXL7 1154 aa11.54□□□□□ -0.56
GPN3-207ENST00000550228 LMTK3Q96Q04 1460 aa11.54□□□□□ -0.56
GPN3-207ENST00000550228 SETBP1Q9Y6X0 1596 aa11.54□□□□□ -0.56
GPN3-207ENST00000550228 PLEKHG1Q9ULL1 1385 aa11.54□□□□□ -0.56
GPN3-207ENST00000550228 SETD1AO15047 1707 aaKnown RBP11.53□□□□□ -0.56
GPN3-207ENST00000550228 ANKLE2Q86XL3 938 aa11.53□□□□□ -0.56
GPN3-207ENST00000550228 ASXL1Q8IXJ9 1541 aa11.52□□□□□ -0.57
GPN3-207ENST00000550228 C14orf93Q9H972 538 aaKnown RBP11.52□□□□□ -0.57
GPN3-207ENST00000550228 GPRASP1Q5JY77 1395 aa11.52□□□□□ -0.57
GPN3-207ENST00000550228 TMEM132EQ6IEE7 984 aa11.51□□□□□ -0.57
GPN3-207ENST00000550228 HIRIP3Q9BW71 556 aaPredicted RBP11.51□□□□□ -0.57
GPN3-207ENST00000550228 NCKAP5LQ9HCH0 1330 aa11.51□□□□□ -0.57
GPN3-207ENST00000550228 USP47Q96K76 1375 aa11.51□□□□□ -0.57
GPN3-207ENST00000550228 ADGRB1O14514 1584 aa11.5□□□□□ -0.57
GPN3-207ENST00000550228 HSPA5P11021 654 aaKnown RBP11.5□□□□□ -0.57
GPN3-207ENST00000550228 ADAMTS13Q76LX8 1427 aa11.5□□□□□ -0.57
GPN3-207ENST00000550228 EIF4G2P78344 907 aaKnown RBP eCLIP11.49□□□□□ -0.57
GPN3-207ENST00000550228 SLC26A8Q96RN1 970 aa11.49□□□□□ -0.57
GPN3-207ENST00000550228 NPHP4O75161 1426 aaPredicted RBP11.49□□□□□ -0.57
GPN3-207ENST00000550228 DIP2AQ14689 1571 aa11.49□□□□□ -0.57
GPN3-207ENST00000550228 STK26Q9P289 416 aa11.48□□□□□ -0.57
GPN3-207ENST00000550228 ARHGEF28Q8N1W1 1705 aaKnown RBP11.47□□□□□ -0.57
GPN3-207ENST00000550228 METP08581 1390 aa11.47□□□□□ -0.57
GPN3-207ENST00000550228 TRAK1Q9UPV9 953 aa11.47□□□□□ -0.57
GPN3-207ENST00000550228 STRCQ7RTU9 1775 aa11.46□□□□□ -0.57
GPN3-207ENST00000550228 MED14O60244 1454 aa11.46□□□□□ -0.57
GPN3-207ENST00000550228 YTHDC2Q9H6S0 1430 aaKnown RBP11.46□□□□□ -0.57
GPN3-207ENST00000550228 EIF3AQ14152 1382 aaKnown RBP11.45□□□□□ -0.58
GPN3-207ENST00000550228 ZNF316A6NFI3 1004 aaPredicted RBP11.45□□□□□ -0.58
GPN3-207ENST00000550228 KNDC1Q76NI1 1749 aa11.45□□□□□ -0.58
GPN3-207ENST00000550228 LRPPRCP42704 1394 aaKnown RBP11.44□□□□□ -0.58
GPN3-207ENST00000550228 QRICH2Q9H0J4 1663 aa11.44□□□□□ -0.58
GPN3-207ENST00000550228 ST20-MTHFSA0A0A6YYL1 179 aa11.44□□□□□ -0.58
GPN3-207ENST00000550228 TBX22Q9Y458 520 aa11.44□□□□□ -0.58
GPN3-207ENST00000550228 PTPRUQ92729 1446 aa11.43□□□□□ -0.58
GPN3-207ENST00000550228 CHD2O14647 1828 aaKnown RBP11.42□□□□□ -0.58
GPN3-207ENST00000550228 XRN1Q8IZH2 1706 aaKnown RBP11.42□□□□□ -0.58
GPN3-207ENST00000550228 CENPJQ9HC77 1338 aaPredicted RBP11.41□□□□□ -0.58
GPN3-207ENST00000550228 CPS1P31327 1500 aa11.41□□□□□ -0.58
GPN3-207ENST00000550228 DLC1Q96QB1 1528 aa11.41□□□□□ -0.58
GPN3-207ENST00000550228 SAFB2Q14151 953 aaKnown RBP eCLIP11.41□□□□□ -0.58
GPN3-207ENST00000550228 POGKQ9P215 609 aa11.41□□□□□ -0.58
GPN3-207ENST00000550228 ABCC11Q96J66 1382 aa11.41□□□□□ -0.58
GPN3-207ENST00000550228 PRAM1Q96QH2 718 aa11.4□□□□□ -0.58
GPN3-207ENST00000550228 AMOTL2Q9Y2J4 779 aa11.4□□□□□ -0.58
GPN3-207ENST00000550228 PIK3R4Q99570 1358 aa11.4□□□□□ -0.59
GPN3-207ENST00000550228 PLEKHH1Q9ULM0 1364 aa11.4□□□□□ -0.59
GPN3-207ENST00000550228 TECPR2O15040 1411 aa11.39□□□□□ -0.59
GPN3-207ENST00000550228 WAPLQ7Z5K2 1190 aa11.39□□□□□ -0.59
GPN3-207ENST00000550228 POLR3GLQ9BT43 218 aa11.39□□□□□ -0.59
GPN3-207ENST00000550228 ROBO2Q9HCK4 1378 aa11.39□□□□□ -0.59
GPN3-207ENST00000550228 NWD1Q149M9 1564 aa11.38□□□□□ -0.59
GPN3-207ENST00000550228 TESK2Q96S53 571 aa11.38□□□□□ -0.59
GPN3-207ENST00000550228 MINK1Q8N4C8 1332 aaPredicted RBP11.37□□□□□ -0.59
GPN3-207ENST00000550228 PTCH1Q13635 1447 aa11.37□□□□□ -0.59
GPN3-207ENST00000550228 STRCP1A6NGW2 1772 aa11.37□□□□□ -0.59
GPN3-207ENST00000550228 C11orf95C9JLR9 678 aaPredicted RBP11.37□□□□□ -0.59
GPN3-207ENST00000550228 KCNA6P17658 529 aa11.37□□□□□ -0.59
GPN3-207ENST00000550228 DISP3Q9P2K9 1392 aa11.37□□□□□ -0.59
GPN3-207ENST00000550228 FAM135BQ49AJ0 1406 aa11.36□□□□□ -0.59
GPN3-207ENST00000550228 TMF1P82094 1093 aa11.36□□□□□ -0.59
GPN3-207ENST00000550228 KIF7Q2M1P5 1343 aa11.35□□□□□ -0.59
GPN3-207ENST00000550228 CCDC7Q96M83 1385 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms