RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 SLC4A1APQ9BWU0 796 aaKnown RBP25.78■■□□□ 1.72
CHMP1A-208ENST00000550102 SETD5Q9C0A6 1442 aa25.77■■□□□ 1.72
CHMP1A-208ENST00000550102 PLEKHG1Q9ULL1 1385 aa25.76■■□□□ 1.71
CHMP1A-208ENST00000550102 PPP1R15AO75807 674 aaPredicted RBP25.75■■□□□ 1.71
CHMP1A-208ENST00000550102 DIP2AQ14689 1571 aa25.74■■□□□ 1.71
CHMP1A-208ENST00000550102 HDGFP51858 240 aaKnown RBP25.74■■□□□ 1.71
CHMP1A-208ENST00000550102 NWD1Q149M9 1564 aa25.73■■□□□ 1.71
CHMP1A-208ENST00000550102 ACIN1Q9UKV3 1341 aaKnown RBP25.73■■□□□ 1.71
CHMP1A-208ENST00000550102 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.73■■□□□ 1.71
CHMP1A-208ENST00000550102 LRRC7Q96NW7 1537 aa25.73■■□□□ 1.71
CHMP1A-208ENST00000550102 XIRP1Q702N8 1843 aaKnown RBP25.72■■□□□ 1.71
CHMP1A-208ENST00000550102 NEXMIFQ5QGS0 1516 aa25.69■■□□□ 1.7
CHMP1A-208ENST00000550102 CHD2O14647 1828 aaKnown RBP25.69■■□□□ 1.7
CHMP1A-208ENST00000550102 RAB3GAP2Q9H2M9 1393 aa25.69■■□□□ 1.7
CHMP1A-208ENST00000550102 BCANQ96GW7 911 aa25.68■■□□□ 1.7
CHMP1A-208ENST00000550102 SLC26A8Q96RN1 970 aa25.68■■□□□ 1.7
CHMP1A-208ENST00000550102 NKTRP30414 1462 aaKnown RBP25.67■■□□□ 1.7
CHMP1A-208ENST00000550102 NRXN3Q9Y4C0 1643 aa25.66■■□□□ 1.7
CHMP1A-208ENST00000550102 SETBP1Q9Y6X0 1596 aa25.65■■□□□ 1.7
CHMP1A-208ENST00000550102 UBAP1LF5GYI3 381 aa25.65■■□□□ 1.7
CHMP1A-208ENST00000550102 PPLO60437 1756 aa25.64■■□□□ 1.7
CHMP1A-208ENST00000550102 ZNF326Q5BKZ1 582 aaKnown RBP25.63■■□□□ 1.69
CHMP1A-208ENST00000550102 MPHOSPH9Q99550 1183 aa25.63■■□□□ 1.69
CHMP1A-208ENST00000550102 ADAMTS13Q76LX8 1427 aa25.63■■□□□ 1.69
CHMP1A-208ENST00000550102 NUTM2DQ5VT03 806 aaPredicted RBP25.62■■□□□ 1.69
CHMP1A-208ENST00000550102 SENP3Q9H4L4 574 aaPredicted RBP25.62■■□□□ 1.69
CHMP1A-208ENST00000550102 CCDC144AA2RUR9 1427 aa25.62■■□□□ 1.69
CHMP1A-208ENST00000550102 KCNA6P17658 529 aa25.6■■□□□ 1.69
CHMP1A-208ENST00000550102 FOXD1Q16676 465 aa25.6■■□□□ 1.69
CHMP1A-208ENST00000550102 ALKQ9UM73 1620 aa25.59■■□□□ 1.69
CHMP1A-208ENST00000550102 IFT172Q9UG01 1749 aa25.57■■□□□ 1.68
CHMP1A-208ENST00000550102 TBX22Q9Y458 520 aa25.57■■□□□ 1.68
CHMP1A-208ENST00000550102 PIK3R4Q99570 1358 aa25.56■■□□□ 1.68
CHMP1A-208ENST00000550102 XRN1Q8IZH2 1706 aaKnown RBP25.55■■□□□ 1.68
CHMP1A-208ENST00000550102 TOM1O60784 492 aa25.55■■□□□ 1.68
CHMP1A-208ENST00000550102 SETD1AO15047 1707 aaKnown RBP25.53■■□□□ 1.68
CHMP1A-208ENST00000550102 TMEM94Q12767 1356 aa25.53■■□□□ 1.68
CHMP1A-208ENST00000550102 RPGRIP1LQ68CZ1 1315 aa25.5■■□□□ 1.67
CHMP1A-208ENST00000550102 SPATA31E1Q6ZUB1 1445 aa25.5■■□□□ 1.67
CHMP1A-208ENST00000550102 SCAF1Q9H7N4 1312 aaKnown RBP25.5■■□□□ 1.67
CHMP1A-208ENST00000550102 PROSER2Q86WR7 435 aaPredicted RBP25.49■■□□□ 1.67
CHMP1A-208ENST00000550102 HRCP23327 699 aa25.48■■□□□ 1.67
CHMP1A-208ENST00000550102 PIP4K2BP78356 416 aa25.47■■□□□ 1.67
CHMP1A-208ENST00000550102 VGFO15240 615 aaPredicted RBP25.46■■□□□ 1.67
CHMP1A-208ENST00000550102 PTPRUQ92729 1446 aa25.45■■□□□ 1.66
CHMP1A-208ENST00000550102 MSH6P52701 1360 aa25.43■■□□□ 1.66
CHMP1A-208ENST00000550102 NCOA3Q9Y6Q9 1424 aa25.42■■□□□ 1.66
CHMP1A-208ENST00000550102 METP08581 1390 aa25.42■■□□□ 1.66
CHMP1A-208ENST00000550102 ANKRD30BQ9BXX2 1392 aa25.41■■□□□ 1.66
CHMP1A-208ENST00000550102 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.4■■□□□ 1.66
CHMP1A-208ENST00000550102 RBM33Q96EV2 1170 aaKnown RBP25.4■■□□□ 1.66
CHMP1A-208ENST00000550102 RGL3Q3MIN7 710 aa25.38■■□□□ 1.65
CHMP1A-208ENST00000550102 AMOTL2Q9Y2J4 779 aa25.38■■□□□ 1.65
CHMP1A-208ENST00000550102 ROBO1Q9Y6N7 1651 aa25.38■■□□□ 1.65
CHMP1A-208ENST00000550102 LAMC1P11047 1609 aa25.37■■□□□ 1.65
CHMP1A-208ENST00000550102 MYOM2P54296 1465 aa25.35■■□□□ 1.65
CHMP1A-208ENST00000550102 NALCNQ8IZF0 1738 aa25.35■■□□□ 1.65
CHMP1A-208ENST00000550102 C14orf37Q86TY3 774 aa25.34■■□□□ 1.65
CHMP1A-208ENST00000550102 PRAG1Q86YV5 1406 aa25.34■■□□□ 1.65
CHMP1A-208ENST00000550102 PIK3C2GO75747 1445 aa25.33■■□□□ 1.65
CHMP1A-208ENST00000550102 PTCH1Q13635 1447 aa25.33■■□□□ 1.65
CHMP1A-208ENST00000550102 HSPA1LP34931 641 aa25.32■■□□□ 1.64
CHMP1A-208ENST00000550102 KNDC1Q76NI1 1749 aa25.31■■□□□ 1.64
CHMP1A-208ENST00000550102 ADGRF5Q8IZF2 1346 aa25.31■■□□□ 1.64
CHMP1A-208ENST00000550102 DCCP43146 1447 aa25.3■■□□□ 1.64
CHMP1A-208ENST00000550102 FAM135BQ49AJ0 1406 aa25.3■■□□□ 1.64
CHMP1A-208ENST00000550102 NRXN1Q9ULB1 1477 aa25.29■■□□□ 1.64
CHMP1A-208ENST00000550102 ASXL1Q8IXJ9 1541 aa25.28■■□□□ 1.64
CHMP1A-208ENST00000550102 ADGRL3Q9HAR2 1447 aa25.28■■□□□ 1.64
CHMP1A-208ENST00000550102 C19orf44Q9H6X5 657 aa25.25■■□□□ 1.63
CHMP1A-208ENST00000550102 PHLPP1O60346 1717 aa25.24■■□□□ 1.63
CHMP1A-208ENST00000550102 CADPS2Q86UW7 1296 aa25.24■■□□□ 1.63
CHMP1A-208ENST00000550102 DISP3Q9P2K9 1392 aa25.23■■□□□ 1.63
CHMP1A-208ENST00000550102 ATF3P18847 181 aa25.23■■□□□ 1.63
CHMP1A-208ENST00000550102 ROBO2Q9HCK4 1378 aa25.22■■□□□ 1.63
CHMP1A-208ENST00000550102 SLAIN2Q9P270 581 aa25.22■■□□□ 1.63
CHMP1A-208ENST00000550102 TECPR2O15040 1411 aa25.21■■□□□ 1.63
CHMP1A-208ENST00000550102 MED1Q15648 1581 aaPredicted RBP25.2■■□□□ 1.62
CHMP1A-208ENST00000550102 LRPPRCP42704 1394 aaKnown RBP25.18■■□□□ 1.62
CHMP1A-208ENST00000550102 CDC42BPGQ6DT37 1551 aa25.17■■□□□ 1.62
CHMP1A-208ENST00000550102 AHDC1Q5TGY3 1603 aaPredicted RBP25.16■■□□□ 1.62
CHMP1A-208ENST00000550102 MST1RQ04912 1400 aa25.16■■□□□ 1.62
CHMP1A-208ENST00000550102 COL16A1Q07092 1604 aaPredicted RBP25.15■■□□□ 1.62
CHMP1A-208ENST00000550102 YTHDC2Q9H6S0 1430 aaKnown RBP25.15■■□□□ 1.62
CHMP1A-208ENST00000550102 NHSL1Q5SYE7 1610 aa25.13■■□□□ 1.61
CHMP1A-208ENST00000550102 ABCC11Q96J66 1382 aa25.13■■□□□ 1.61
CHMP1A-208ENST00000550102 C14orf93Q9H972 538 aaKnown RBP25.12■■□□□ 1.61
CHMP1A-208ENST00000550102 ADGRB1O14514 1584 aa25.11■■□□□ 1.61
CHMP1A-208ENST00000550102 DHX57Q6P158 1386 aaKnown RBP25.11■■□□□ 1.61
CHMP1A-208ENST00000550102 TRIM26Q12899 539 aaPredicted RBP25.11■■□□□ 1.61
CHMP1A-208ENST00000550102 DCAF11Q8TEB1 546 aa25.11■■□□□ 1.61
CHMP1A-208ENST00000550102 STAC3Q96MF2 364 aa25.11■■□□□ 1.61
CHMP1A-208ENST00000550102 TMEM132EQ6IEE7 984 aa25.1■■□□□ 1.61
CHMP1A-208ENST00000550102 STK26Q9P289 416 aa25.1■■□□□ 1.61
CHMP1A-208ENST00000550102 CFAP70Q5T0N1 1121 aa25.09■■□□□ 1.61
CHMP1A-208ENST00000550102 KIAA1210Q9ULL0 1709 aa25.09■■□□□ 1.61
CHMP1A-208ENST00000550102 DLC1Q96QB1 1528 aa25.08■■□□□ 1.61
CHMP1A-208ENST00000550102 KDM2AQ9Y2K7 1162 aa25.07■■□□□ 1.6
CHMP1A-208ENST00000550102 FMN2Q9NZ56 1722 aa25.06■■□□□ 1.6
CHMP1A-208ENST00000550102 BRINP3Q76B58 766 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms