RNA–Protein interactions for RNA: ENST00000549913.6

RPH3A-217, Transcript of rabphilin 3A, humanhuman

TSL 1 (best)

Gene RPH3A, Length 5,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-217ENST00000549913 FOXD4L4Q8WXT5 416 aaPredicted RBP13.9□□□□□ -0.18
RPH3A-217ENST00000549913 TAF7LQ5H9L4 462 aa13.9□□□□□ -0.18
RPH3A-217ENST00000549913 OSCARQ8IYS5 282 aa13.9□□□□□ -0.18
RPH3A-217ENST00000549913 API5Q9BZZ5 524 aaKnown RBP13.9□□□□□ -0.18
RPH3A-217ENST00000549913 EHBP1L1Q8N3D4 1523 aa13.9□□□□□ -0.18
RPH3A-217ENST00000549913 ADAMTS8Q9UP79 889 aa13.89□□□□□ -0.19
RPH3A-217ENST00000549913 TIAM1Q13009 1591 aa13.89□□□□□ -0.19
RPH3A-217ENST00000549913 CDCA7LQ96GN5 454 aa13.89□□□□□ -0.19
RPH3A-217ENST00000549913 KIF16BQ96L93 1317 aa13.88□□□□□ -0.19
RPH3A-217ENST00000549913 HSP90B1P14625 803 aaKnown RBP13.88□□□□□ -0.19
RPH3A-217ENST00000549913 CYB5RLQ6IPT4 315 aa13.88□□□□□ -0.19
RPH3A-217ENST00000549913 SYNJ2O15056 1496 aa13.88□□□□□ -0.19
RPH3A-217ENST00000549913 TEFQ10587 303 aa13.87□□□□□ -0.19
RPH3A-217ENST00000549913 RILPL2Q969X0 211 aa13.87□□□□□ -0.19
RPH3A-217ENST00000549913 HMGXB3Q12766 1538 aa13.87□□□□□ -0.19
RPH3A-217ENST00000549913 KIAA1107Q9UPP5 1409 aa13.86□□□□□ -0.19
RPH3A-217ENST00000549913 TPM4P67936 248 aa13.86□□□□□ -0.19
RPH3A-217ENST00000549913 NBPF8Q3BBV2 869 aa13.86□□□□□ -0.19
RPH3A-217ENST00000549913 ARHGAP5Q13017 1502 aa13.86□□□□□ -0.19
RPH3A-217ENST00000549913 AFAP1Q8N556 730 aa13.86□□□□□ -0.19
RPH3A-217ENST00000549913 PANK1Q8TE04 598 aa13.86□□□□□ -0.19
RPH3A-217ENST00000549913 TOPBP1Q92547 1522 aa13.85□□□□□ -0.19
RPH3A-217ENST00000549913 REC8O95072 547 aa13.85□□□□□ -0.19
RPH3A-217ENST00000549913 C22orf23Q9BZE7 217 aa13.85□□□□□ -0.19
RPH3A-217ENST00000549913 KIF3AQ9Y496 699 aa13.85□□□□□ -0.19
RPH3A-217ENST00000549913 AKNAQ7Z591 1439 aa13.85□□□□□ -0.19
RPH3A-217ENST00000549913 POLA1P09884 1462 aaPredicted RBP13.85□□□□□ -0.19
RPH3A-217ENST00000549913 GNAI1P63096 354 aa13.84□□□□□ -0.19
RPH3A-217ENST00000549913 C1orf141Q5JVX7 400 aa13.84□□□□□ -0.19
RPH3A-217ENST00000549913 PNISRQ8TF01 805 aaKnown RBP13.84□□□□□ -0.19
RPH3A-217ENST00000549913 ATP6V1DQ9Y5K8 247 aa13.84□□□□□ -0.19
RPH3A-217ENST00000549913 WDR97A6NE52 1622 aa13.84□□□□□ -0.19
RPH3A-217ENST00000549913 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.84□□□□□ -0.19
RPH3A-217ENST00000549913 TROQ12816 1431 aaPredicted RBP13.84□□□□□ -0.19
RPH3A-217ENST00000549913 CFAP70Q5T0N1 1121 aa13.84□□□□□ -0.19
RPH3A-217ENST00000549913 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.84□□□□□ -0.19
RPH3A-217ENST00000549913 GGNBP2Q9H3C7 697 aa13.84□□□□□ -0.19
RPH3A-217ENST00000549913 ROCK1Q13464 1354 aa13.84□□□□□ -0.19
RPH3A-217ENST00000549913 ISY1Q9ULR0 285 aaKnown RBP13.84□□□□□ -0.19
RPH3A-217ENST00000549913 NESP48681 1621 aa13.84□□□□□ -0.19
RPH3A-217ENST00000549913 CCDC34Q96HJ3 373 aa13.83□□□□□ -0.19
RPH3A-217ENST00000549913 C9orf84Q5VXU9 1444 aa13.83□□□□□ -0.2
RPH3A-217ENST00000549913 SMG6Q86US8 1419 aaKnown RBP13.83□□□□□ -0.2
RPH3A-217ENST00000549913 NBPF1Q3BBV0 1214 aa13.83□□□□□ -0.2
RPH3A-217ENST00000549913 TMEM132EQ6IEE7 984 aa13.83□□□□□ -0.2
RPH3A-217ENST00000549913 PPP2R1AP30153 589 aa13.82□□□□□ -0.2
RPH3A-217ENST00000549913 MTHFSP49914 203 aa13.82□□□□□ -0.2
RPH3A-217ENST00000549913 CCDC184Q52MB2 194 aa13.82□□□□□ -0.2
RPH3A-217ENST00000549913 BACH2Q9BYV9 841 aa13.81□□□□□ -0.2
RPH3A-217ENST00000549913 TCP11L2Q8N4U5 519 aa13.81□□□□□ -0.2
RPH3A-217ENST00000549913 LNPKQ9C0E8 428 aa13.81□□□□□ -0.2
RPH3A-217ENST00000549913 CABP2Q9NPB3 220 aa13.81□□□□□ -0.2
RPH3A-217ENST00000549913 PRG4Q92954 1404 aaPredicted RBP13.81□□□□□ -0.2
RPH3A-217ENST00000549913 FOXD4L6Q3SYB3 417 aaPredicted RBP13.8□□□□□ -0.2
RPH3A-217ENST00000549913 FOXD4L3Q6VB84 417 aaPredicted RBP13.8□□□□□ -0.2
RPH3A-217ENST00000549913 DIAPH3Q9NSV4 1193 aa13.8□□□□□ -0.2
RPH3A-217ENST00000549913 NEXNQ0ZGT2 675 aa13.8□□□□□ -0.2
RPH3A-217ENST00000549913 EIF2S2P20042 333 aaKnown RBP13.79□□□□□ -0.2
RPH3A-217ENST00000549913 HECW1Q76N89 1606 aa13.79□□□□□ -0.2
RPH3A-217ENST00000549913 HMOX1P09601 288 aa13.79□□□□□ -0.2
RPH3A-217ENST00000549913 NUCB2P80303 420 aa13.79□□□□□ -0.2
RPH3A-217ENST00000549913 C9orf78Q9NZ63 289 aaPredicted RBP13.79□□□□□ -0.2
RPH3A-217ENST00000549913 IFT140Q96RY7 1462 aa13.79□□□□□ -0.2
RPH3A-217ENST00000549913 FKBP5Q13451 457 aaPredicted RBP13.79□□□□□ -0.2
RPH3A-217ENST00000549913 RUFY2Q8WXA3 655 aa13.79□□□□□ -0.2
RPH3A-217ENST00000549913 MRC2Q9UBG0 1479 aa13.79□□□□□ -0.2
RPH3A-217ENST00000549913 PLEKHH2Q8IVE3 1493 aa13.78□□□□□ -0.2
RPH3A-217ENST00000549913 DAPK1P53355 1430 aa13.78□□□□□ -0.2
RPH3A-217ENST00000549913 PDE3AQ14432 1141 aa13.78□□□□□ -0.2
RPH3A-217ENST00000549913 INTS3Q68E01 1043 aaKnown RBP13.78□□□□□ -0.2
RPH3A-217ENST00000549913 CHMP4CQ96CF2 233 aa13.77□□□□□ -0.2
RPH3A-217ENST00000549913 MRE11P49959 708 aa13.77□□□□□ -0.2
RPH3A-217ENST00000549913 SF3A1Q15459 793 aaKnown RBP13.77□□□□□ -0.2
RPH3A-217ENST00000549913 NAIPQ13075 1403 aa13.77□□□□□ -0.2
RPH3A-217ENST00000549913 FAM69CQ0P6D2 419 aa13.77□□□□□ -0.21
RPH3A-217ENST00000549913 SCAPERQ9BY12 1400 aa13.77□□□□□ -0.21
RPH3A-217ENST00000549913 SUPT6HQ7KZ85 1726 aaKnown RBP13.77□□□□□ -0.21
RPH3A-217ENST00000549913 FRAT2O75474 233 aaPredicted RBP13.77□□□□□ -0.21
RPH3A-217ENST00000549913 CCDC9Q9Y3X0 531 aaKnown RBP13.77□□□□□ -0.21
RPH3A-217ENST00000549913 VSIG10Q8N0Z9 540 aa13.76□□□□□ -0.21
RPH3A-217ENST00000549913 FAM43AQ8N2R8 423 aa13.76□□□□□ -0.21
RPH3A-217ENST00000549913 TOMM22Q9NS69 142 aa13.76□□□□□ -0.21
RPH3A-217ENST00000549913 TSPYL4Q9UJ04 414 aa13.76□□□□□ -0.21
RPH3A-217ENST00000549913 ZKSCAN1P17029 563 aaPredicted RBP13.76□□□□□ -0.21
RPH3A-217ENST00000549913 NECTIN2Q92692 538 aa13.76□□□□□ -0.21
RPH3A-217ENST00000549913 DNMBPQ6XZF7 1577 aa13.76□□□□□ -0.21
RPH3A-217ENST00000549913 H3BQV1 296 aa13.76□□□□□ -0.21
RPH3A-217ENST00000549913 IFFO2Q5TF58 517 aa13.76□□□□□ -0.21
RPH3A-217ENST00000549913 TTC5Q8N0Z6 440 aa13.76□□□□□ -0.21
RPH3A-217ENST00000549913 FAM184AQ8NB25 1140 aa13.75□□□□□ -0.21
RPH3A-217ENST00000549913 DDX58O95786 925 aaKnown RBP13.75□□□□□ -0.21
RPH3A-217ENST00000549913 ANO2Q9NQ90 1003 aa13.74□□□□□ -0.21
RPH3A-217ENST00000549913 PDZRN3Q9UPQ7 1066 aa13.74□□□□□ -0.21
RPH3A-217ENST00000549913 GOLGA6L19H0YKK7 550 aa13.74□□□□□ -0.21
RPH3A-217ENST00000549913 TRAK2O60296 914 aa13.74□□□□□ -0.21
RPH3A-217ENST00000549913 IFIT2P09913 472 aaKnown RBP13.74□□□□□ -0.21
RPH3A-217ENST00000549913 MCTP1Q6DN14 999 aa13.74□□□□□ -0.21
RPH3A-217ENST00000549913 CDC45O75419 566 aa13.74□□□□□ -0.21
RPH3A-217ENST00000549913 GTF2E1P29083 439 aaPredicted RBP13.73□□□□□ -0.21
RPH3A-217ENST00000549913 PSME1Q06323 249 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms