RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 NKTRP30414 1462 aaKnown RBP20.98■□□□□ 0.95
TROAP-211ENST00000549891 NWD1Q149M9 1564 aa20.97■□□□□ 0.95
TROAP-211ENST00000549891 HDGFP51858 240 aaKnown RBP20.97■□□□□ 0.95
TROAP-211ENST00000549891 PROSER2Q86WR7 435 aaPredicted RBP20.97■□□□□ 0.95
TROAP-211ENST00000549891 UNC13BO14795 1591 aa20.95■□□□□ 0.94
TROAP-211ENST00000549891 ROBO1Q9Y6N7 1651 aa20.94■□□□□ 0.94
TROAP-211ENST00000549891 CHD2O14647 1828 aaKnown RBP20.93■□□□□ 0.94
TROAP-211ENST00000549891 PPP1R15AO75807 674 aaPredicted RBP20.93■□□□□ 0.94
TROAP-211ENST00000549891 TMEM131LA2VDJ0 1609 aa20.93■□□□□ 0.94
TROAP-211ENST00000549891 MSH6P52701 1360 aa20.92■□□□□ 0.94
TROAP-211ENST00000549891 PLEKHG1Q9ULL1 1385 aa20.92■□□□□ 0.94
TROAP-211ENST00000549891 ZFYVE9O95405 1425 aa20.92■□□□□ 0.94
TROAP-211ENST00000549891 RIMS2Q9UQ26 1411 aa20.91■□□□□ 0.94
TROAP-211ENST00000549891 E9PCH4 1651 aa20.89■□□□□ 0.94
TROAP-211ENST00000549891 ROCK1Q13464 1354 aa20.89■□□□□ 0.93
TROAP-211ENST00000549891 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.89■□□□□ 0.93
TROAP-211ENST00000549891 RBM33Q96EV2 1170 aaKnown RBP20.88■□□□□ 0.93
TROAP-211ENST00000549891 IQGAP3Q86VI3 1631 aa20.88■□□□□ 0.93
TROAP-211ENST00000549891 CHGAP10645 457 aaKnown RBP20.85■□□□□ 0.93
TROAP-211ENST00000549891 TBX22Q9Y458 520 aa20.85■□□□□ 0.93
TROAP-211ENST00000549891 DIP2AQ14689 1571 aa20.85■□□□□ 0.93
TROAP-211ENST00000549891 PHLPP1O60346 1717 aa20.84■□□□□ 0.93
TROAP-211ENST00000549891 SLAIN2Q9P270 581 aa20.84■□□□□ 0.93
TROAP-211ENST00000549891 NCOA3Q9Y6Q9 1424 aa20.84■□□□□ 0.93
TROAP-211ENST00000549891 RGS17Q9UGC6 210 aaPredicted RBP20.83■□□□□ 0.93
TROAP-211ENST00000549891 NUP155O75694 1391 aa20.8■□□□□ 0.92
TROAP-211ENST00000549891 PIK3R4Q99570 1358 aa20.8■□□□□ 0.92
TROAP-211ENST00000549891 C14orf37Q86TY3 774 aa20.79■□□□□ 0.92
TROAP-211ENST00000549891 ADAMTS13Q76LX8 1427 aa20.78■□□□□ 0.92
TROAP-211ENST00000549891 TRPM2O94759 1503 aa20.77■□□□□ 0.92
TROAP-211ENST00000549891 JCADQ9P266 1359 aa20.76■□□□□ 0.91
TROAP-211ENST00000549891 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.75■□□□□ 0.91
TROAP-211ENST00000549891 ITGAEP38570 1179 aa20.75■□□□□ 0.91
TROAP-211ENST00000549891 NUTM2DQ5VT03 806 aaPredicted RBP20.75■□□□□ 0.91
TROAP-211ENST00000549891 CADPS2Q86UW7 1296 aa20.75■□□□□ 0.91
TROAP-211ENST00000549891 SPHKAPQ2M3C7 1700 aa20.75■□□□□ 0.91
TROAP-211ENST00000549891 C19orf44Q9H6X5 657 aa20.74■□□□□ 0.91
TROAP-211ENST00000549891 ATF3P18847 181 aa20.73■□□□□ 0.91
TROAP-211ENST00000549891 COL16A1Q07092 1604 aaPredicted RBP20.73■□□□□ 0.91
TROAP-211ENST00000549891 POTEAQ6S8J7 498 aa20.72■□□□□ 0.91
TROAP-211ENST00000549891 AMOTL2Q9Y2J4 779 aa20.69■□□□□ 0.9
TROAP-211ENST00000549891 AHDC1Q5TGY3 1603 aaPredicted RBP20.68■□□□□ 0.9
TROAP-211ENST00000549891 SPATA31A6Q5VVP1 1343 aa20.68■□□□□ 0.9
TROAP-211ENST00000549891 SETBP1Q9Y6X0 1596 aa20.68■□□□□ 0.9
TROAP-211ENST00000549891 ZNF326Q5BKZ1 582 aaKnown RBP20.66■□□□□ 0.9
TROAP-211ENST00000549891 DCCP43146 1447 aa20.66■□□□□ 0.9
TROAP-211ENST00000549891 NRXN3Q9Y4C0 1643 aa20.66■□□□□ 0.9
TROAP-211ENST00000549891 SHPRHQ149N8 1683 aa20.66■□□□□ 0.9
TROAP-211ENST00000549891 XRN1Q8IZH2 1706 aaKnown RBP20.65■□□□□ 0.9
TROAP-211ENST00000549891 PTPRUQ92729 1446 aa20.65■□□□□ 0.9
TROAP-211ENST00000549891 KIF1BO60333 1816 aa20.64■□□□□ 0.89
TROAP-211ENST00000549891 MEX3CQ5U5Q3 659 aaKnown RBP20.63■□□□□ 0.89
TROAP-211ENST00000549891 PPARGC1BQ86YN6 1023 aaKnown RBP20.63■□□□□ 0.89
TROAP-211ENST00000549891 CLTCL1P53675 1640 aa20.6■□□□□ 0.89
TROAP-211ENST00000549891 LRP6O75581 1613 aa20.6■□□□□ 0.89
TROAP-211ENST00000549891 SETD1AO15047 1707 aaKnown RBP20.59■□□□□ 0.89
TROAP-211ENST00000549891 ZNF772Q68DY9 489 aaPredicted RBP20.59■□□□□ 0.89
TROAP-211ENST00000549891 BRINP3Q76B58 766 aa20.59■□□□□ 0.89
TROAP-211ENST00000549891 NEXMIFQ5QGS0 1516 aa20.58■□□□□ 0.88
TROAP-211ENST00000549891 ASXL1Q8IXJ9 1541 aa20.58■□□□□ 0.88
TROAP-211ENST00000549891 RRBP1Q9P2E9 1410 aaKnown RBP20.57■□□□□ 0.88
TROAP-211ENST00000549891 METP08581 1390 aa20.57■□□□□ 0.88
TROAP-211ENST00000549891 NHSL1Q5SYE7 1610 aa20.56■□□□□ 0.88
TROAP-211ENST00000549891 MST1RQ04912 1400 aa20.55■□□□□ 0.88
TROAP-211ENST00000549891 NAIPQ13075 1403 aa20.54■□□□□ 0.88
TROAP-211ENST00000549891 ADGRL3Q9HAR2 1447 aa20.53■□□□□ 0.88
TROAP-211ENST00000549891 NALCNQ8IZF0 1738 aa20.53■□□□□ 0.88
TROAP-211ENST00000549891 SETD5Q9C0A6 1442 aa20.53■□□□□ 0.88
TROAP-211ENST00000549891 LRRC59Q96AG4 307 aaKnown RBP20.51■□□□□ 0.87
TROAP-211ENST00000549891 NUTM2BA6NNL0 878 aaPredicted RBP20.5■□□□□ 0.87
TROAP-211ENST00000549891 NUTM2EB1AL46 878 aaPredicted RBP20.5■□□□□ 0.87
TROAP-211ENST00000549891 VGFO15240 615 aaPredicted RBP20.5■□□□□ 0.87
TROAP-211ENST00000549891 NUTM2AQ8IVF1 878 aaPredicted RBP20.5■□□□□ 0.87
TROAP-211ENST00000549891 TRIM52Q96A61 297 aa20.48■□□□□ 0.87
TROAP-211ENST00000549891 HFM1A2PYH4 1435 aa20.47■□□□□ 0.87
TROAP-211ENST00000549891 PTCH1Q13635 1447 aa20.47■□□□□ 0.87
TROAP-211ENST00000549891 RXRBP28702 533 aa20.47■□□□□ 0.87
TROAP-211ENST00000549891 RPGRIP1LQ68CZ1 1315 aa20.47■□□□□ 0.87
TROAP-211ENST00000549891 PPLO60437 1756 aa20.45■□□□□ 0.86
TROAP-211ENST00000549891 CDK12Q9NYV4 1490 aaPredicted RBP20.44■□□□□ 0.86
TROAP-211ENST00000549891 SLC4A1APQ9BWU0 796 aaKnown RBP20.44■□□□□ 0.86
TROAP-211ENST00000549891 AFF2P51816 1311 aa20.43■□□□□ 0.86
TROAP-211ENST00000549891 C1orf167Q5SNV9 1468 aa20.43■□□□□ 0.86
TROAP-211ENST00000549891 LAMC1P11047 1609 aa20.42■□□□□ 0.86
TROAP-211ENST00000549891 PNPLA6Q8IY17 1366 aa20.42■□□□□ 0.86
TROAP-211ENST00000549891 PRAG1Q86YV5 1406 aa20.42■□□□□ 0.86
TROAP-211ENST00000549891 DDX17Q92841 729 aaKnown RBP20.4■□□□□ 0.86
TROAP-211ENST00000549891 UPF1Q92900 1129 aaKnown RBP eCLIP20.4■□□□□ 0.86
TROAP-211ENST00000549891 ROBO2Q9HCK4 1378 aa20.39■□□□□ 0.85
TROAP-211ENST00000549891 C8orf37Q96NL8 207 aa20.39■□□□□ 0.85
TROAP-211ENST00000549891 QTRT2Q9H974 415 aaKnown RBP20.35■□□□□ 0.85
TROAP-211ENST00000549891 SOS2Q07890 1332 aaPredicted RBP20.34■□□□□ 0.85
TROAP-211ENST00000549891 RBM6P78332 1123 aaKnown RBP20.34■□□□□ 0.85
TROAP-211ENST00000549891 ORAI2Q96SN7 254 aa20.34■□□□□ 0.85
TROAP-211ENST00000549891 NGLY1Q96IV0 654 aa20.33■□□□□ 0.85
TROAP-211ENST00000549891 CCDC144AA2RUR9 1427 aa20.33■□□□□ 0.84
TROAP-211ENST00000549891 CDC42BPGQ6DT37 1551 aa20.33■□□□□ 0.84
TROAP-211ENST00000549891 ADAMTS2O95450 1211 aa20.31■□□□□ 0.84
TROAP-211ENST00000549891 COL22A1Q8NFW1 1626 aaPredicted RBP20.31■□□□□ 0.84
TROAP-211ENST00000549891 IFT172Q9UG01 1749 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms