RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 ADGRB3O60242 1522 aa15.84■□□□□ 0.13
CCDC38-207ENST00000549752 TXNDC2Q86VQ3 553 aa15.83■□□□□ 0.12
CCDC38-207ENST00000549752 IDI1Q13907 227 aa15.82■□□□□ 0.12
CCDC38-207ENST00000549752 TMEM2Q9UHN6 1383 aa15.82■□□□□ 0.12
CCDC38-207ENST00000549752 STRCP1A6NGW2 1772 aa15.8■□□□□ 0.12
CCDC38-207ENST00000549752 SPHKAPQ2M3C7 1700 aa15.8■□□□□ 0.12
CCDC38-207ENST00000549752 NUP155O75694 1391 aa15.79■□□□□ 0.12
CCDC38-207ENST00000549752 UBAP1LF5GYI3 381 aa15.79■□□□□ 0.12
CCDC38-207ENST00000549752 HDGFP51858 240 aaKnown RBP15.79■□□□□ 0.12
CCDC38-207ENST00000549752 TMEM131LA2VDJ0 1609 aa15.78■□□□□ 0.12
CCDC38-207ENST00000549752 LTKP29376 864 aa15.77■□□□□ 0.12
CCDC38-207ENST00000549752 TOM1O60784 492 aa15.76■□□□□ 0.11
CCDC38-207ENST00000549752 KIF1BO60333 1816 aa15.74■□□□□ 0.11
CCDC38-207ENST00000549752 MYCNP04198 464 aaPredicted RBP15.74■□□□□ 0.11
CCDC38-207ENST00000549752 ATXN8OSP0DMR3 200 aa15.74■□□□□ 0.11
CCDC38-207ENST00000549752 XIRP1Q702N8 1843 aaKnown RBP15.73■□□□□ 0.11
CCDC38-207ENST00000549752 NAIPQ13075 1403 aa15.72■□□□□ 0.11
CCDC38-207ENST00000549752 SLC4A2P04920 1241 aa15.72■□□□□ 0.11
CCDC38-207ENST00000549752 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.72■□□□□ 0.11
CCDC38-207ENST00000549752 CHD2O14647 1828 aaKnown RBP15.72■□□□□ 0.11
CCDC38-207ENST00000549752 HFM1A2PYH4 1435 aa15.71■□□□□ 0.11
CCDC38-207ENST00000549752 LRRC7Q96NW7 1537 aa15.71■□□□□ 0.11
CCDC38-207ENST00000549752 PPP1R15AO75807 674 aaPredicted RBP15.7■□□□□ 0.1
CCDC38-207ENST00000549752 CHGAP10645 457 aaKnown RBP15.7■□□□□ 0.1
CCDC38-207ENST00000549752 BCANQ96GW7 911 aa15.7■□□□□ 0.1
CCDC38-207ENST00000549752 ZFYVE9O95405 1425 aa15.69■□□□□ 0.1
CCDC38-207ENST00000549752 RIMS2Q9UQ26 1411 aa15.69■□□□□ 0.1
CCDC38-207ENST00000549752 PLEKHG1Q9ULL1 1385 aa15.68■□□□□ 0.1
CCDC38-207ENST00000549752 DIP2AQ14689 1571 aa15.67■□□□□ 0.1
CCDC38-207ENST00000549752 NWD1Q149M9 1564 aa15.67■□□□□ 0.1
CCDC38-207ENST00000549752 NKTRP30414 1462 aaKnown RBP15.66■□□□□ 0.1
CCDC38-207ENST00000549752 KCNA6P17658 529 aa15.66■□□□□ 0.1
CCDC38-207ENST00000549752 ACIN1Q9UKV3 1341 aaKnown RBP15.66■□□□□ 0.1
CCDC38-207ENST00000549752 TRPM2O94759 1503 aa15.65■□□□□ 0.1
CCDC38-207ENST00000549752 PIP4K2BP78356 416 aa15.65■□□□□ 0.1
CCDC38-207ENST00000549752 SLC26A8Q96RN1 970 aa15.65■□□□□ 0.1
CCDC38-207ENST00000549752 TRIM52Q96A61 297 aa15.64■□□□□ 0.09
CCDC38-207ENST00000549752 CLTCL1P53675 1640 aa15.63■□□□□ 0.09
CCDC38-207ENST00000549752 TBX22Q9Y458 520 aa15.62■□□□□ 0.09
CCDC38-207ENST00000549752 PROSER2Q86WR7 435 aaPredicted RBP15.61■□□□□ 0.09
CCDC38-207ENST00000549752 PIK3R4Q99570 1358 aa15.61■□□□□ 0.09
CCDC38-207ENST00000549752 ALKQ9UM73 1620 aa15.61■□□□□ 0.09
CCDC38-207ENST00000549752 ZNF326Q5BKZ1 582 aaKnown RBP15.59■□□□□ 0.09
CCDC38-207ENST00000549752 TMEM94Q12767 1356 aa15.59■□□□□ 0.09
CCDC38-207ENST00000549752 DISP3Q9P2K9 1392 aa15.59■□□□□ 0.09
CCDC38-207ENST00000549752 SETBP1Q9Y6X0 1596 aa15.58■□□□□ 0.08
CCDC38-207ENST00000549752 MSH6P52701 1360 aa15.57■□□□□ 0.08
CCDC38-207ENST00000549752 HSPA1LP34931 641 aa15.56■□□□□ 0.08
CCDC38-207ENST00000549752 ADAMTS13Q76LX8 1427 aa15.56■□□□□ 0.08
CCDC38-207ENST00000549752 NCOA3Q9Y6Q9 1424 aa15.56■□□□□ 0.08
CCDC38-207ENST00000549752 PPLO60437 1756 aa15.55■□□□□ 0.08
CCDC38-207ENST00000549752 NRXN3Q9Y4C0 1643 aa15.55■□□□□ 0.08
CCDC38-207ENST00000549752 NEXMIFQ5QGS0 1516 aa15.55■□□□□ 0.08
CCDC38-207ENST00000549752 NUTM2DQ5VT03 806 aaPredicted RBP15.55■□□□□ 0.08
CCDC38-207ENST00000549752 ROBO1Q9Y6N7 1651 aa15.54■□□□□ 0.08
CCDC38-207ENST00000549752 FAM135BQ49AJ0 1406 aa15.52■□□□□ 0.08
CCDC38-207ENST00000549752 RPGRIP1LQ68CZ1 1315 aa15.52■□□□□ 0.08
CCDC38-207ENST00000549752 XRN1Q8IZH2 1706 aaKnown RBP15.51■□□□□ 0.07
CCDC38-207ENST00000549752 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.51■□□□□ 0.07
CCDC38-207ENST00000549752 VGFO15240 615 aaPredicted RBP15.51■□□□□ 0.07
CCDC38-207ENST00000549752 C14orf37Q86TY3 774 aa15.51■□□□□ 0.07
CCDC38-207ENST00000549752 SETD5Q9C0A6 1442 aa15.51■□□□□ 0.07
CCDC38-207ENST00000549752 CCDC144AA2RUR9 1427 aa15.5■□□□□ 0.07
CCDC38-207ENST00000549752 MED1Q15648 1581 aaPredicted RBP15.49■□□□□ 0.07
CCDC38-207ENST00000549752 MPHOSPH9Q99550 1183 aa15.48■□□□□ 0.07
CCDC38-207ENST00000549752 AMOTL2Q9Y2J4 779 aa15.48■□□□□ 0.07
CCDC38-207ENST00000549752 PHLPP1O60346 1717 aa15.48■□□□□ 0.07
CCDC38-207ENST00000549752 IFT172Q9UG01 1749 aa15.48■□□□□ 0.07
CCDC38-207ENST00000549752 SETD1AO15047 1707 aaKnown RBP15.47■□□□□ 0.07
CCDC38-207ENST00000549752 CADPS2Q86UW7 1296 aa15.47■□□□□ 0.07
CCDC38-207ENST00000549752 RBM33Q96EV2 1170 aaKnown RBP15.47■□□□□ 0.07
CCDC38-207ENST00000549752 C19orf44Q9H6X5 657 aa15.47■□□□□ 0.07
CCDC38-207ENST00000549752 ATF3P18847 181 aa15.46■□□□□ 0.07
CCDC38-207ENST00000549752 SLAIN2Q9P270 581 aa15.46■□□□□ 0.07
CCDC38-207ENST00000549752 DCCP43146 1447 aa15.44■□□□□ 0.06
CCDC38-207ENST00000549752 PTPRUQ92729 1446 aa15.43■□□□□ 0.06
CCDC38-207ENST00000549752 METP08581 1390 aa15.42■□□□□ 0.06
CCDC38-207ENST00000549752 ANKRD30BQ9BXX2 1392 aa15.42■□□□□ 0.06
CCDC38-207ENST00000549752 RAB3GAP2Q9H2M9 1393 aa15.41■□□□□ 0.06
CCDC38-207ENST00000549752 NALCNQ8IZF0 1738 aa15.41■□□□□ 0.06
CCDC38-207ENST00000549752 AMER1Q5JTC6 1135 aaPredicted RBP15.41■□□□□ 0.06
CCDC38-207ENST00000549752 DCAF8L1A6NGE4 600 aa15.39■□□□□ 0.05
CCDC38-207ENST00000549752 PTCH1Q13635 1447 aa15.39■□□□□ 0.05
CCDC38-207ENST00000549752 SPATA31E1Q6ZUB1 1445 aa15.39■□□□□ 0.05
CCDC38-207ENST00000549752 PRAG1Q86YV5 1406 aa15.38■□□□□ 0.05
CCDC38-207ENST00000549752 HRCP23327 699 aa15.38■□□□□ 0.05
CCDC38-207ENST00000549752 LAMC1P11047 1609 aa15.38■□□□□ 0.05
CCDC38-207ENST00000549752 AHDC1Q5TGY3 1603 aaPredicted RBP15.38■□□□□ 0.05
CCDC38-207ENST00000549752 ADGRL3Q9HAR2 1447 aa15.37■□□□□ 0.05
CCDC38-207ENST00000549752 COL16A1Q07092 1604 aaPredicted RBP15.37■□□□□ 0.05
CCDC38-207ENST00000549752 RGL3Q3MIN7 710 aa15.37■□□□□ 0.05
CCDC38-207ENST00000549752 ILDR2Q71H61 639 aa15.37■□□□□ 0.05
CCDC38-207ENST00000549752 KNDC1Q76NI1 1749 aa15.37■□□□□ 0.05
CCDC38-207ENST00000549752 SHPRHQ149N8 1683 aa15.35■□□□□ 0.05
CCDC38-207ENST00000549752 NHSL1Q5SYE7 1610 aa15.35■□□□□ 0.05
CCDC38-207ENST00000549752 JCADQ9P266 1359 aa15.35■□□□□ 0.05
CCDC38-207ENST00000549752 SOCS7O14512 581 aa15.34■□□□□ 0.05
CCDC38-207ENST00000549752 FKBP8Q14318 412 aa15.33■□□□□ 0.04
CCDC38-207ENST00000549752 ADGRF5Q8IZF2 1346 aa15.32■□□□□ 0.04
CCDC38-207ENST00000549752 PIK3C2GO75747 1445 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms