RNA–Protein interactions for RNA: ENST00000549718.5

LINC00661-205, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 569 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-205ENST00000549718 NWD1Q149M9 1564 aa24.59■■□□□ 1.53
LINC00661-205ENST00000549718 RIMS2Q9UQ26 1411 aa24.58■■□□□ 1.53
LINC00661-205ENST00000549718 NAIPQ13075 1403 aa24.54■■□□□ 1.52
LINC00661-205ENST00000549718 SLC26A8Q96RN1 970 aa24.54■■□□□ 1.52
LINC00661-205ENST00000549718 CHD2O14647 1828 aaKnown RBP24.54■■□□□ 1.52
LINC00661-205ENST00000549718 PLEKHG1Q9ULL1 1385 aa24.54■■□□□ 1.52
LINC00661-205ENST00000549718 NKTRP30414 1462 aaKnown RBP24.52■■□□□ 1.52
LINC00661-205ENST00000549718 HSPA1LP34931 641 aa24.52■■□□□ 1.52
LINC00661-205ENST00000549718 PPP1R15AO75807 674 aaPredicted RBP24.51■■□□□ 1.51
LINC00661-205ENST00000549718 CHGAP10645 457 aaKnown RBP24.51■■□□□ 1.51
LINC00661-205ENST00000549718 BCANQ96GW7 911 aa24.49■■□□□ 1.51
LINC00661-205ENST00000549718 DIP2AQ14689 1571 aa24.49■■□□□ 1.51
LINC00661-205ENST00000549718 HFM1A2PYH4 1435 aa24.48■■□□□ 1.51
LINC00661-205ENST00000549718 KCNA6P17658 529 aa24.48■■□□□ 1.51
LINC00661-205ENST00000549718 SENP3Q9H4L4 574 aaPredicted RBP24.48■■□□□ 1.51
LINC00661-205ENST00000549718 CLTCL1P53675 1640 aa24.47■■□□□ 1.51
LINC00661-205ENST00000549718 TMEM94Q12767 1356 aa24.47■■□□□ 1.51
LINC00661-205ENST00000549718 HDGFP51858 240 aaKnown RBP24.47■■□□□ 1.51
LINC00661-205ENST00000549718 MED1Q15648 1581 aaPredicted RBP24.46■■□□□ 1.51
LINC00661-205ENST00000549718 TRPM2O94759 1503 aa24.45■■□□□ 1.51
LINC00661-205ENST00000549718 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.45■■□□□ 1.5
LINC00661-205ENST00000549718 KIF1BO60333 1816 aa24.44■■□□□ 1.5
LINC00661-205ENST00000549718 ADAMTS13Q76LX8 1427 aa24.42■■□□□ 1.5
LINC00661-205ENST00000549718 NUTM2DQ5VT03 806 aaPredicted RBP24.41■■□□□ 1.5
LINC00661-205ENST00000549718 PROSER2Q86WR7 435 aaPredicted RBP24.41■■□□□ 1.5
LINC00661-205ENST00000549718 NRXN3Q9Y4C0 1643 aa24.41■■□□□ 1.5
LINC00661-205ENST00000549718 ILDR2Q71H61 639 aa24.4■■□□□ 1.5
LINC00661-205ENST00000549718 ROBO1Q9Y6N7 1651 aa24.4■■□□□ 1.5
LINC00661-205ENST00000549718 RBM33Q96EV2 1170 aaKnown RBP24.38■■□□□ 1.49
LINC00661-205ENST00000549718 TBX22Q9Y458 520 aa24.37■■□□□ 1.49
LINC00661-205ENST00000549718 SETBP1Q9Y6X0 1596 aa24.37■■□□□ 1.49
LINC00661-205ENST00000549718 NEXMIFQ5QGS0 1516 aa24.35■■□□□ 1.49
LINC00661-205ENST00000549718 MSH6P52701 1360 aa24.34■■□□□ 1.49
LINC00661-205ENST00000549718 PIK3R4Q99570 1358 aa24.34■■□□□ 1.49
LINC00661-205ENST00000549718 TRIM52Q96A61 297 aa24.33■■□□□ 1.49
LINC00661-205ENST00000549718 FAM135BQ49AJ0 1406 aa24.33■■□□□ 1.49
LINC00661-205ENST00000549718 XRN1Q8IZH2 1706 aaKnown RBP24.32■■□□□ 1.48
LINC00661-205ENST00000549718 ZNF326Q5BKZ1 582 aaKnown RBP24.31■■□□□ 1.48
LINC00661-205ENST00000549718 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.3■■□□□ 1.48
LINC00661-205ENST00000549718 PTPRUQ92729 1446 aa24.28■■□□□ 1.48
LINC00661-205ENST00000549718 NCOA3Q9Y6Q9 1424 aa24.27■■□□□ 1.48
LINC00661-205ENST00000549718 PPLO60437 1756 aa24.26■■□□□ 1.47
LINC00661-205ENST00000549718 SLC4A1APQ9BWU0 796 aaKnown RBP24.26■■□□□ 1.47
LINC00661-205ENST00000549718 PHLPP1O60346 1717 aa24.25■■□□□ 1.47
LINC00661-205ENST00000549718 SETD1AO15047 1707 aaKnown RBP24.24■■□□□ 1.47
LINC00661-205ENST00000549718 C14orf37Q86TY3 774 aa24.21■■□□□ 1.47
LINC00661-205ENST00000549718 AMOTL2Q9Y2J4 779 aa24.21■■□□□ 1.47
LINC00661-205ENST00000549718 SOCS7O14512 581 aa24.2■■□□□ 1.46
LINC00661-205ENST00000549718 SLAIN2Q9P270 581 aa24.19■■□□□ 1.46
LINC00661-205ENST00000549718 METP08581 1390 aa24.18■■□□□ 1.46
LINC00661-205ENST00000549718 PHF23Q9BUL5 403 aaPredicted RBP24.17■■□□□ 1.46
LINC00661-205ENST00000549718 NALCNQ8IZF0 1738 aa24.17■■□□□ 1.46
LINC00661-205ENST00000549718 COL16A1Q07092 1604 aaPredicted RBP24.17■■□□□ 1.46
LINC00661-205ENST00000549718 IFT172Q9UG01 1749 aa24.16■■□□□ 1.46
LINC00661-205ENST00000549718 FOXD1Q16676 465 aa24.15■■□□□ 1.46
LINC00661-205ENST00000549718 DCCP43146 1447 aa24.14■■□□□ 1.45
LINC00661-205ENST00000549718 C19orf44Q9H6X5 657 aa24.14■■□□□ 1.45
LINC00661-205ENST00000549718 CCDC144AA2RUR9 1427 aa24.13■■□□□ 1.45
LINC00661-205ENST00000549718 CADPS2Q86UW7 1296 aa24.13■■□□□ 1.45
LINC00661-205ENST00000549718 AHDC1Q5TGY3 1603 aaPredicted RBP24.13■■□□□ 1.45
LINC00661-205ENST00000549718 ATF3P18847 181 aa24.11■■□□□ 1.45
LINC00661-205ENST00000549718 RPGRIP1LQ68CZ1 1315 aa24.1■■□□□ 1.45
LINC00661-205ENST00000549718 VGFO15240 615 aaPredicted RBP24.1■■□□□ 1.45
LINC00661-205ENST00000549718 SETD5Q9C0A6 1442 aa24.1■■□□□ 1.45
LINC00661-205ENST00000549718 MPHOSPH9Q99550 1183 aa24.09■■□□□ 1.45
LINC00661-205ENST00000549718 ADGRL3Q9HAR2 1447 aa24.09■■□□□ 1.45
LINC00661-205ENST00000549718 PTCH1Q13635 1447 aa24.08■■□□□ 1.44
LINC00661-205ENST00000549718 SPATA31E1Q6ZUB1 1445 aa24.07■■□□□ 1.44
LINC00661-205ENST00000549718 SHPRHQ149N8 1683 aa24.06■■□□□ 1.44
LINC00661-205ENST00000549718 NHSL1Q5SYE7 1610 aa24.06■■□□□ 1.44
LINC00661-205ENST00000549718 ASXL1Q8IXJ9 1541 aa24.05■■□□□ 1.44
LINC00661-205ENST00000549718 MST1RQ04912 1400 aa24.05■■□□□ 1.44
LINC00661-205ENST00000549718 PRAG1Q86YV5 1406 aa24.05■■□□□ 1.44
LINC00661-205ENST00000549718 JCADQ9P266 1359 aa24.04■■□□□ 1.44
LINC00661-205ENST00000549718 ACIN1Q9UKV3 1341 aaKnown RBP24.03■■□□□ 1.44
LINC00661-205ENST00000549718 RAB3GAP2Q9H2M9 1393 aa24.02■■□□□ 1.44
LINC00661-205ENST00000549718 BRINP3Q76B58 766 aa24.01■■□□□ 1.43
LINC00661-205ENST00000549718 ROBO2Q9HCK4 1378 aa24■■□□□ 1.43
LINC00661-205ENST00000549718 KNDC1Q76NI1 1749 aa23.98■■□□□ 1.43
LINC00661-205ENST00000549718 RGL3Q3MIN7 710 aa23.98■■□□□ 1.43
LINC00661-205ENST00000549718 RGS17Q9UGC6 210 aaPredicted RBP23.98■■□□□ 1.43
LINC00661-205ENST00000549718 ANKRD30BQ9BXX2 1392 aa23.98■■□□□ 1.43
LINC00661-205ENST00000549718 ADGRF5Q8IZF2 1346 aa23.97■■□□□ 1.43
LINC00661-205ENST00000549718 LRP6O75581 1613 aa23.95■■□□□ 1.43
LINC00661-205ENST00000549718 PIK3C2GO75747 1445 aa23.94■■□□□ 1.42
LINC00661-205ENST00000549718 LAMC1P11047 1609 aa23.93■■□□□ 1.42
LINC00661-205ENST00000549718 CDC42BPGQ6DT37 1551 aa23.93■■□□□ 1.42
LINC00661-205ENST00000549718 SPATA31A6Q5VVP1 1343 aa23.92■■□□□ 1.42
LINC00661-205ENST00000549718 C1orf167Q5SNV9 1468 aa23.92■■□□□ 1.42
LINC00661-205ENST00000549718 MYOM2P54296 1465 aa23.9■■□□□ 1.42
LINC00661-205ENST00000549718 TECPR2O15040 1411 aa23.9■■□□□ 1.42
LINC00661-205ENST00000549718 NRXN1Q9ULB1 1477 aa23.88■■□□□ 1.41
LINC00661-205ENST00000549718 LRPPRCP42704 1394 aaKnown RBP23.87■■□□□ 1.41
LINC00661-205ENST00000549718 POTEAQ6S8J7 498 aa23.86■■□□□ 1.41
LINC00661-205ENST00000549718 DDX17Q92841 729 aaKnown RBP23.84■■□□□ 1.41
LINC00661-205ENST00000549718 MEX3CQ5U5Q3 659 aaKnown RBP23.83■■□□□ 1.41
LINC00661-205ENST00000549718 YTHDC2Q9H6S0 1430 aaKnown RBP23.83■■□□□ 1.4
LINC00661-205ENST00000549718 FMN2Q9NZ56 1722 aa23.82■■□□□ 1.4
LINC00661-205ENST00000549718 STK26Q9P289 416 aa23.82■■□□□ 1.4
LINC00661-205ENST00000549718 ABCC11Q96J66 1382 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms