RNA–Protein interactions for RNA: ENST00000549639.1

USP44-205, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-205ENST00000549639 CHGAP10645 457 aaKnown RBP36.45■■■■□ 3.43
USP44-205ENST00000549639 PPP1R15AO75807 674 aaPredicted RBP36.44■■■■□ 3.42
USP44-205ENST00000549639 KCNA6P17658 529 aa36.44■■■■□ 3.42
USP44-205ENST00000549639 SLC26A8Q96RN1 970 aa36.44■■■■□ 3.42
USP44-205ENST00000549639 SCAF1Q9H7N4 1312 aaKnown RBP36.43■■■■□ 3.42
USP44-205ENST00000549639 PIP4K2BP78356 416 aa36.43■■■■□ 3.42
USP44-205ENST00000549639 BCANQ96GW7 911 aa36.43■■■■□ 3.42
USP44-205ENST00000549639 SPHKAPQ2M3C7 1700 aa36.37■■■■□ 3.41
USP44-205ENST00000549639 ALKQ9UM73 1620 aa36.36■■■■□ 3.41
USP44-205ENST00000549639 NKTRP30414 1462 aaKnown RBP36.33■■■■□ 3.41
USP44-205ENST00000549639 NWD1Q149M9 1564 aa36.32■■■■□ 3.41
USP44-205ENST00000549639 TBX22Q9Y458 520 aa36.32■■■■□ 3.4
USP44-205ENST00000549639 DISP3Q9P2K9 1392 aa36.3■■■■□ 3.4
USP44-205ENST00000549639 HSPA1LP34931 641 aa36.3■■■■□ 3.4
USP44-205ENST00000549639 XIRP1Q702N8 1843 aaKnown RBP36.29■■■■□ 3.4
USP44-205ENST00000549639 TMEM94Q12767 1356 aa36.29■■■■□ 3.4
USP44-205ENST00000549639 TRIM52Q96A61 297 aa36.29■■■■□ 3.4
USP44-205ENST00000549639 PROSER2Q86WR7 435 aaPredicted RBP36.28■■■■□ 3.4
USP44-205ENST00000549639 TRPM2O94759 1503 aa36.26■■■■□ 3.4
USP44-205ENST00000549639 DIP2AQ14689 1571 aa36.26■■■■□ 3.39
USP44-205ENST00000549639 PIK3R4Q99570 1358 aa36.23■■■■□ 3.39
USP44-205ENST00000549639 CHD2O14647 1828 aaKnown RBP36.22■■■■□ 3.39
USP44-205ENST00000549639 NUTM2DQ5VT03 806 aaPredicted RBP36.22■■■■□ 3.39
USP44-205ENST00000549639 ADAMTS13Q76LX8 1427 aa36.22■■■■□ 3.39
USP44-205ENST00000549639 SLC4A1APQ9BWU0 796 aaKnown RBP36.21■■■■□ 3.39
USP44-205ENST00000549639 SENP3Q9H4L4 574 aaPredicted RBP36.2■■■■□ 3.39
USP44-205ENST00000549639 ZNF326Q5BKZ1 582 aaKnown RBP36.19■■■■□ 3.38
USP44-205ENST00000549639 CLTCL1P53675 1640 aa36.18■■■■□ 3.38
USP44-205ENST00000549639 ACIN1Q9UKV3 1341 aaKnown RBP36.15■■■■□ 3.38
USP44-205ENST00000549639 NCOA3Q9Y6Q9 1424 aa36.14■■■■□ 3.38
USP44-205ENST00000549639 MSH6P52701 1360 aa36.13■■■■□ 3.37
USP44-205ENST00000549639 FAM135BQ49AJ0 1406 aa36.12■■■■□ 3.37
USP44-205ENST00000549639 KIF1BO60333 1816 aa36.12■■■■□ 3.37
USP44-205ENST00000549639 SETBP1Q9Y6X0 1596 aa36.1■■■■□ 3.37
USP44-205ENST00000549639 RBM33Q96EV2 1170 aaKnown RBP36.09■■■■□ 3.37
USP44-205ENST00000549639 NEXMIFQ5QGS0 1516 aa36.06■■■■□ 3.36
USP44-205ENST00000549639 NRXN3Q9Y4C0 1643 aa36.03■■■■□ 3.36
USP44-205ENST00000549639 AMOTL2Q9Y2J4 779 aa36.02■■■■□ 3.36
USP44-205ENST00000549639 RPGRIP1LQ68CZ1 1315 aa36.02■■■■□ 3.36
USP44-205ENST00000549639 VGFO15240 615 aaPredicted RBP35.99■■■■□ 3.35
USP44-205ENST00000549639 MPHOSPH9Q99550 1183 aa35.98■■■■□ 3.35
USP44-205ENST00000549639 PTPRUQ92729 1446 aa35.98■■■■□ 3.35
USP44-205ENST00000549639 C14orf37Q86TY3 774 aa35.97■■■■□ 3.35
USP44-205ENST00000549639 SLAIN2Q9P270 581 aa35.97■■■■□ 3.35
USP44-205ENST00000549639 MED1Q15648 1581 aaPredicted RBP35.97■■■■□ 3.35
USP44-205ENST00000549639 C19orf44Q9H6X5 657 aa35.96■■■■□ 3.35
USP44-205ENST00000549639 SETD5Q9C0A6 1442 aa35.95■■■■□ 3.35
USP44-205ENST00000549639 ILDR2Q71H61 639 aa35.95■■■■□ 3.35
USP44-205ENST00000549639 ROBO1Q9Y6N7 1651 aa35.94■■■■□ 3.34
USP44-205ENST00000549639 CCDC144AA2RUR9 1427 aa35.92■■■■□ 3.34
USP44-205ENST00000549639 CADPS2Q86UW7 1296 aa35.92■■■■□ 3.34
USP44-205ENST00000549639 XRN1Q8IZH2 1706 aaKnown RBP35.91■■■■□ 3.34
USP44-205ENST00000549639 FOXD1Q16676 465 aa35.91■■■■□ 3.34
USP44-205ENST00000549639 METP08581 1390 aa35.9■■■■□ 3.34
USP44-205ENST00000549639 ATF3P18847 181 aa35.88■■■■□ 3.33
USP44-205ENST00000549639 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.86■■■■□ 3.33
USP44-205ENST00000549639 DCCP43146 1447 aa35.84■■■■□ 3.33
USP44-205ENST00000549639 PPLO60437 1756 aa35.83■■■■□ 3.33
USP44-205ENST00000549639 PHF23Q9BUL5 403 aaPredicted RBP35.79■■■■□ 3.32
USP44-205ENST00000549639 RAB3GAP2Q9H2M9 1393 aa35.78■■■■□ 3.32
USP44-205ENST00000549639 SPATA31E1Q6ZUB1 1445 aa35.78■■■■□ 3.32
USP44-205ENST00000549639 SOCS7O14512 581 aa35.77■■■■□ 3.32
USP44-205ENST00000549639 ANKRD30BQ9BXX2 1392 aa35.76■■■■□ 3.31
USP44-205ENST00000549639 SETD1AO15047 1707 aaKnown RBP35.75■■■■□ 3.31
USP44-205ENST00000549639 PTCH1Q13635 1447 aa35.74■■■■□ 3.31
USP44-205ENST00000549639 PHLPP1O60346 1717 aa35.73■■■■□ 3.31
USP44-205ENST00000549639 PRAG1Q86YV5 1406 aa35.73■■■■□ 3.31
USP44-205ENST00000549639 RGL3Q3MIN7 710 aa35.72■■■■□ 3.31
USP44-205ENST00000549639 ADGRL3Q9HAR2 1447 aa35.72■■■■□ 3.31
USP44-205ENST00000549639 HRCP23327 699 aa35.69■■■■□ 3.3
USP44-205ENST00000549639 JCADQ9P266 1359 aa35.67■■■■□ 3.3
USP44-205ENST00000549639 IFT172Q9UG01 1749 aa35.66■■■■□ 3.3
USP44-205ENST00000549639 AHDC1Q5TGY3 1603 aaPredicted RBP35.65■■■■□ 3.3
USP44-205ENST00000549639 ADGRF5Q8IZF2 1346 aa35.65■■■■□ 3.3
USP44-205ENST00000549639 BRINP3Q76B58 766 aa35.64■■■■□ 3.3
USP44-205ENST00000549639 MST1RQ04912 1400 aa35.64■■■■□ 3.3
USP44-205ENST00000549639 COL16A1Q07092 1604 aaPredicted RBP35.63■■■■□ 3.29
USP44-205ENST00000549639 ROBO2Q9HCK4 1378 aa35.63■■■■□ 3.29
USP44-205ENST00000549639 NALCNQ8IZF0 1738 aa35.6■■■■□ 3.29
USP44-205ENST00000549639 PIK3C2GO75747 1445 aa35.57■■■■□ 3.29
USP44-205ENST00000549639 ASXL1Q8IXJ9 1541 aa35.57■■■■□ 3.28
USP44-205ENST00000549639 SPATA31A6Q5VVP1 1343 aa35.53■■■■□ 3.28
USP44-205ENST00000549639 TECPR2O15040 1411 aa35.51■■■■□ 3.28
USP44-205ENST00000549639 MYOM2P54296 1465 aa35.51■■■■□ 3.28
USP44-205ENST00000549639 LRPPRCP42704 1394 aaKnown RBP35.51■■■■□ 3.27
USP44-205ENST00000549639 RGS17Q9UGC6 210 aaPredicted RBP35.49■■■■□ 3.27
USP44-205ENST00000549639 ABCC11Q96J66 1382 aa35.49■■■■□ 3.27
USP44-205ENST00000549639 NRXN1Q9ULB1 1477 aa35.48■■■■□ 3.27
USP44-205ENST00000549639 C1orf167Q5SNV9 1468 aa35.48■■■■□ 3.27
USP44-205ENST00000549639 NHSL1Q5SYE7 1610 aa35.47■■■■□ 3.27
USP44-205ENST00000549639 SHPRHQ149N8 1683 aa35.46■■■■□ 3.27
USP44-205ENST00000549639 C14orf93Q9H972 538 aaKnown RBP35.46■■■■□ 3.27
USP44-205ENST00000549639 LRRC59Q96AG4 307 aaKnown RBP35.43■■■■□ 3.26
USP44-205ENST00000549639 STK26Q9P289 416 aa35.43■■■■□ 3.26
USP44-205ENST00000549639 KNDC1Q76NI1 1749 aa35.43■■■■□ 3.26
USP44-205ENST00000549639 LAMC1P11047 1609 aa35.43■■■■□ 3.26
USP44-205ENST00000549639 TMEM132EQ6IEE7 984 aa35.42■■■■□ 3.26
USP44-205ENST00000549639 YTHDC2Q9H6S0 1430 aaKnown RBP35.41■■■■□ 3.26
USP44-205ENST00000549639 SIRT1Q96EB6 747 aa35.41■■■■□ 3.26
USP44-205ENST00000549639 CDC42BPGQ6DT37 1551 aa35.41■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms