RNA–Protein interactions for RNA: ENST00000549550.1

TCHP-208, Transcript of trichoplein keratin filament binding, humanhuman

TSL 3

Gene TCHP, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-208ENST00000549550 CHD2O14647 1828 aaKnown RBP24.22■■□□□ 1.47
TCHP-208ENST00000549550 APLP2Q06481 763 aa24.2■■□□□ 1.46
TCHP-208ENST00000549550 GCC2Q8IWJ2 1684 aa24.2■■□□□ 1.46
TCHP-208ENST00000549550 MSH6P52701 1360 aa24.19■■□□□ 1.46
TCHP-208ENST00000549550 SETD1AO15047 1707 aaKnown RBP24.19■■□□□ 1.46
TCHP-208ENST00000549550 BCANQ96GW7 911 aa24.18■■□□□ 1.46
TCHP-208ENST00000549550 SLC52A1Q9NWF4 448 aa24.17■■□□□ 1.46
TCHP-208ENST00000549550 ADGRL2O95490 1459 aa24.15■■□□□ 1.46
TCHP-208ENST00000549550 RPRD2Q5VT52 1461 aaKnown RBP24.15■■□□□ 1.46
TCHP-208ENST00000549550 ZFYVE9O95405 1425 aa24.15■■□□□ 1.46
TCHP-208ENST00000549550 SLAIN2Q9P270 581 aa24.14■■□□□ 1.45
TCHP-208ENST00000549550 TMEM131LA2VDJ0 1609 aa24.13■■□□□ 1.45
TCHP-208ENST00000549550 COL16A1Q07092 1604 aaPredicted RBP24.12■■□□□ 1.45
TCHP-208ENST00000549550 PLEKHG1Q9ULL1 1385 aa24.12■■□□□ 1.45
TCHP-208ENST00000549550 JCADQ9P266 1359 aa24.11■■□□□ 1.45
TCHP-208ENST00000549550 RIMS2Q9UQ26 1411 aa24.1■■□□□ 1.45
TCHP-208ENST00000549550 ANKRD50Q9ULJ7 1429 aa24.09■■□□□ 1.45
TCHP-208ENST00000549550 PPP1R15AO75807 674 aaPredicted RBP24.08■■□□□ 1.45
TCHP-208ENST00000549550 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.06■■□□□ 1.44
TCHP-208ENST00000549550 UNC13BO14795 1591 aa24.04■■□□□ 1.44
TCHP-208ENST00000549550 HDGFP51858 240 aaKnown RBP24.04■■□□□ 1.44
TCHP-208ENST00000549550 E9PCH4 1651 aa24.04■■□□□ 1.44
TCHP-208ENST00000549550 FAM50AQ14320 339 aaKnown RBP24.03■■□□□ 1.44
TCHP-208ENST00000549550 LRP6O75581 1613 aa24.02■■□□□ 1.44
TCHP-208ENST00000549550 NCOA3Q9Y6Q9 1424 aa24.02■■□□□ 1.44
TCHP-208ENST00000549550 TBX22Q9Y458 520 aa24.02■■□□□ 1.44
TCHP-208ENST00000549550 DIP2AQ14689 1571 aa24.02■■□□□ 1.44
TCHP-208ENST00000549550 SHPRHQ149N8 1683 aa24.02■■□□□ 1.44
TCHP-208ENST00000549550 C14orf37Q86TY3 774 aa24.01■■□□□ 1.43
TCHP-208ENST00000549550 AHDC1Q5TGY3 1603 aaPredicted RBP24■■□□□ 1.43
TCHP-208ENST00000549550 CHGAP10645 457 aaKnown RBP23.99■■□□□ 1.43
TCHP-208ENST00000549550 ADAMTS13Q76LX8 1427 aa23.99■■□□□ 1.43
TCHP-208ENST00000549550 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.98■■□□□ 1.43
TCHP-208ENST00000549550 SPATA31A6Q5VVP1 1343 aa23.98■■□□□ 1.43
TCHP-208ENST00000549550 NUTM2DQ5VT03 806 aaPredicted RBP23.97■■□□□ 1.43
TCHP-208ENST00000549550 IQGAP3Q86VI3 1631 aa23.95■■□□□ 1.43
TCHP-208ENST00000549550 MEX3CQ5U5Q3 659 aaKnown RBP23.95■■□□□ 1.42
TCHP-208ENST00000549550 CADPS2Q86UW7 1296 aa23.95■■□□□ 1.42
TCHP-208ENST00000549550 PIK3R4Q99570 1358 aa23.94■■□□□ 1.42
TCHP-208ENST00000549550 ATF3P18847 181 aa23.94■■□□□ 1.42
TCHP-208ENST00000549550 C19orf44Q9H6X5 657 aa23.94■■□□□ 1.42
TCHP-208ENST00000549550 TRPM2O94759 1503 aa23.94■■□□□ 1.42
TCHP-208ENST00000549550 ZNF772Q68DY9 489 aaPredicted RBP23.91■■□□□ 1.42
TCHP-208ENST00000549550 TRIM52Q96A61 297 aa23.89■■□□□ 1.41
TCHP-208ENST00000549550 PTPRUQ92729 1446 aa23.88■■□□□ 1.41
TCHP-208ENST00000549550 XRN1Q8IZH2 1706 aaKnown RBP23.87■■□□□ 1.41
TCHP-208ENST00000549550 AMOTL2Q9Y2J4 779 aa23.87■■□□□ 1.41
TCHP-208ENST00000549550 NRXN3Q9Y4C0 1643 aa23.87■■□□□ 1.41
TCHP-208ENST00000549550 BRINP3Q76B58 766 aa23.86■■□□□ 1.41
TCHP-208ENST00000549550 UPF1Q92900 1129 aaKnown RBP eCLIP23.86■■□□□ 1.41
TCHP-208ENST00000549550 NHSL1Q5SYE7 1610 aa23.85■■□□□ 1.41
TCHP-208ENST00000549550 DCCP43146 1447 aa23.84■■□□□ 1.41
TCHP-208ENST00000549550 ASXL1Q8IXJ9 1541 aa23.84■■□□□ 1.41
TCHP-208ENST00000549550 ROCK1Q13464 1354 aa23.84■■□□□ 1.41
TCHP-208ENST00000549550 SPHKAPQ2M3C7 1700 aa23.83■■□□□ 1.41
TCHP-208ENST00000549550 SETBP1Q9Y6X0 1596 aa23.82■■□□□ 1.4
TCHP-208ENST00000549550 NUTM2BA6NNL0 878 aaPredicted RBP23.82■■□□□ 1.4
TCHP-208ENST00000549550 NUTM2EB1AL46 878 aaPredicted RBP23.82■■□□□ 1.4
TCHP-208ENST00000549550 NUTM2AQ8IVF1 878 aaPredicted RBP23.82■■□□□ 1.4
TCHP-208ENST00000549550 RXRBP28702 533 aa23.81■■□□□ 1.4
TCHP-208ENST00000549550 NUP155O75694 1391 aa23.8■■□□□ 1.4
TCHP-208ENST00000549550 MST1RQ04912 1400 aa23.79■■□□□ 1.4
TCHP-208ENST00000549550 CDK12Q9NYV4 1490 aaPredicted RBP23.79■■□□□ 1.4
TCHP-208ENST00000549550 SETD5Q9C0A6 1442 aa23.78■■□□□ 1.4
TCHP-208ENST00000549550 NALCNQ8IZF0 1738 aa23.76■■□□□ 1.39
TCHP-208ENST00000549550 AFF2P51816 1311 aa23.76■■□□□ 1.39
TCHP-208ENST00000549550 METP08581 1390 aa23.73■■□□□ 1.39
TCHP-208ENST00000549550 ADGRL3Q9HAR2 1447 aa23.71■■□□□ 1.39
TCHP-208ENST00000549550 ZNF326Q5BKZ1 582 aaKnown RBP23.71■■□□□ 1.39
TCHP-208ENST00000549550 LRRC59Q96AG4 307 aaKnown RBP23.71■■□□□ 1.39
TCHP-208ENST00000549550 ITGAEP38570 1179 aa23.7■■□□□ 1.38
TCHP-208ENST00000549550 DDX17Q92841 729 aaKnown RBP23.69■■□□□ 1.38
TCHP-208ENST00000549550 CLTCL1P53675 1640 aa23.69■■□□□ 1.38
TCHP-208ENST00000549550 NEXMIFQ5QGS0 1516 aa23.69■■□□□ 1.38
TCHP-208ENST00000549550 KIF1BO60333 1816 aa23.68■■□□□ 1.38
TCHP-208ENST00000549550 PNPLA6Q8IY17 1366 aa23.68■■□□□ 1.38
TCHP-208ENST00000549550 C8orf37Q96NL8 207 aa23.68■■□□□ 1.38
TCHP-208ENST00000549550 RGS12O14924 1447 aa23.67■■□□□ 1.38
TCHP-208ENST00000549550 LAMC1P11047 1609 aa23.65■■□□□ 1.38
TCHP-208ENST00000549550 QTRT2Q9H974 415 aaKnown RBP23.64■■□□□ 1.37
TCHP-208ENST00000549550 RBM6P78332 1123 aaKnown RBP23.63■■□□□ 1.37
TCHP-208ENST00000549550 SRCAPQ6ZRS2 3230 aa23.61■■□□□ 1.37
TCHP-208ENST00000549550 C1orf167Q5SNV9 1468 aa23.61■■□□□ 1.37
TCHP-208ENST00000549550 ADAMTS2O95450 1211 aa23.59■■□□□ 1.37
TCHP-208ENST00000549550 NGLY1Q96IV0 654 aa23.58■■□□□ 1.37
TCHP-208ENST00000549550 PTCH1Q13635 1447 aa23.57■■□□□ 1.36
TCHP-208ENST00000549550 EP400Q96L91 3159 aa23.54■■□□□ 1.36
TCHP-208ENST00000549550 ROBO2Q9HCK4 1378 aa23.53■■□□□ 1.36
TCHP-208ENST00000549550 COL22A1Q8NFW1 1626 aaPredicted RBP23.53■■□□□ 1.36
TCHP-208ENST00000549550 ORAI2Q96SN7 254 aa23.53■■□□□ 1.36
TCHP-208ENST00000549550 SOS2Q07890 1332 aaPredicted RBP23.53■■□□□ 1.36
TCHP-208ENST00000549550 PPARGC1BQ86YN6 1023 aaKnown RBP23.51■■□□□ 1.35
TCHP-208ENST00000549550 PPLO60437 1756 aa23.5■■□□□ 1.35
TCHP-208ENST00000549550 USP21Q9UK80 565 aa23.5■■□□□ 1.35
TCHP-208ENST00000549550 ATAD2Q6PL18 1390 aa23.5■■□□□ 1.35
TCHP-208ENST00000549550 MARF1Q9Y4F3 1742 aaKnown RBP23.5■■□□□ 1.35
TCHP-208ENST00000549550 PRAG1Q86YV5 1406 aa23.49■■□□□ 1.35
TCHP-208ENST00000549550 VGFO15240 615 aaPredicted RBP23.48■■□□□ 1.35
TCHP-208ENST00000549550 TRPC5Q9UL62 973 aaPredicted RBP23.47■■□□□ 1.35
TCHP-208ENST00000549550 HFM1A2PYH4 1435 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms