RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 ARSIQ5FYB1 569 aa15.99■□□□□ 0.15
PRIM1-204ENST00000549549 KHSRPQ92945 711 aaKnown RBP eCLIP15.99■□□□□ 0.15
PRIM1-204ENST00000549549 ZSWIM6Q9HCJ5 1215 aa15.99■□□□□ 0.15
PRIM1-204ENST00000549549 LILRB3O75022 631 aa15.98■□□□□ 0.15
PRIM1-204ENST00000549549 NPM2Q86SE8 214 aaKnown RBP15.98■□□□□ 0.15
PRIM1-204ENST00000549549 NUTM1Q86Y26 1132 aa15.98■□□□□ 0.15
PRIM1-204ENST00000549549 CCDC9Q9Y3X0 531 aaKnown RBP15.98■□□□□ 0.15
PRIM1-204ENST00000549549 HOXB3P14651 431 aaPredicted RBP15.97■□□□□ 0.15
PRIM1-204ENST00000549549 COL9A1P20849 921 aa15.97■□□□□ 0.15
PRIM1-204ENST00000549549 DOK7Q18PE1 504 aa15.97■□□□□ 0.15
PRIM1-204ENST00000549549 GPR153Q6NV75 609 aa15.97■□□□□ 0.15
PRIM1-204ENST00000549549 MOXD2PA6NHM9 499 aa15.96■□□□□ 0.15
PRIM1-204ENST00000549549 KCTD17Q8N5Z5 321 aa15.96■□□□□ 0.15
PRIM1-204ENST00000549549 DNAJB2P25686 324 aa15.95■□□□□ 0.14
PRIM1-204ENST00000549549 WWC1Q8IX03 1113 aa15.95■□□□□ 0.14
PRIM1-204ENST00000549549 TSKSQ9UJT2 592 aa15.95■□□□□ 0.14
PRIM1-204ENST00000549549 BCL2L12Q9HB09 334 aa15.94■□□□□ 0.14
PRIM1-204ENST00000549549 QPCTQ16769 361 aa15.93■□□□□ 0.14
PRIM1-204ENST00000549549 PRM3Q9NNZ6 103 aa15.93■□□□□ 0.14
PRIM1-204ENST00000549549 DDX11L8A8MPP1 907 aa15.92■□□□□ 0.14
PRIM1-204ENST00000549549 C3orf80F5H4A9 247 aa15.92■□□□□ 0.14
PRIM1-204ENST00000549549 NUDT18Q6ZVK8 323 aa15.92■□□□□ 0.14
PRIM1-204ENST00000549549 TMEM134Q9H6X4 195 aa15.92■□□□□ 0.14
PRIM1-204ENST00000549549 PPP1R15AO75807 674 aaPredicted RBP15.91■□□□□ 0.14
PRIM1-204ENST00000549549 PCDHB15Q9Y5E8 787 aa15.91■□□□□ 0.14
PRIM1-204ENST00000549549 PPP1R3GB7ZBB8 358 aa15.9■□□□□ 0.14
PRIM1-204ENST00000549549 NDUFV2P19404 249 aa15.9■□□□□ 0.14
PRIM1-204ENST00000549549 RTL5Q5HYW3 569 aaPredicted RBP15.9■□□□□ 0.14
PRIM1-204ENST00000549549 PSDA5PKW4 1024 aaPredicted RBP15.89■□□□□ 0.13
PRIM1-204ENST00000549549 RIMBP2O15034 1052 aa15.89■□□□□ 0.13
PRIM1-204ENST00000549549 PPP4R3BQ5MIZ7 849 aa15.89■□□□□ 0.13
PRIM1-204ENST00000549549 PRPF38BQ5VTL8 546 aaKnown RBP15.89■□□□□ 0.13
PRIM1-204ENST00000549549 NBPF26B4DH59 902 aa15.88■□□□□ 0.13
PRIM1-204ENST00000549549 CSPP1Q1MSJ5 1256 aa15.88■□□□□ 0.13
PRIM1-204ENST00000549549 ZNF710Q8N1W2 664 aa15.88■□□□□ 0.13
PRIM1-204ENST00000549549 TATDN2Q93075 761 aa15.88■□□□□ 0.13
PRIM1-204ENST00000549549 LHX6Q9UPM6 363 aa15.88■□□□□ 0.13
PRIM1-204ENST00000549549 AP1G2O75843 785 aa15.87■□□□□ 0.13
PRIM1-204ENST00000549549 ABL2P42684 1182 aa15.87■□□□□ 0.13
PRIM1-204ENST00000549549 RETREG2Q8NC44 543 aa15.87■□□□□ 0.13
PRIM1-204ENST00000549549 CALR3Q96L12 384 aaKnown RBP15.87■□□□□ 0.13
PRIM1-204ENST00000549549 TBC1D2BQ9UPU7 963 aa15.87■□□□□ 0.13
PRIM1-204ENST00000549549 TRIM6-TRIM34B2RNG4 842 aa15.85■□□□□ 0.13
PRIM1-204ENST00000549549 PNMA3Q9UL41 463 aa15.85■□□□□ 0.13
PRIM1-204ENST00000549549 PTPREP23469 700 aa15.84■□□□□ 0.13
PRIM1-204ENST00000549549 PACS2Q86VP3 889 aa15.84■□□□□ 0.13
PRIM1-204ENST00000549549 POM121CA8CG34 1229 aa15.83■□□□□ 0.12
PRIM1-204ENST00000549549 USP17L8P0C7I0 530 aa15.83■□□□□ 0.12
PRIM1-204ENST00000549549 GLMNQ92990 594 aa15.83■□□□□ 0.12
PRIM1-204ENST00000549549 KDM4AO75164 1064 aa15.82■□□□□ 0.12
PRIM1-204ENST00000549549 USP46P62068 366 aa15.81■□□□□ 0.12
PRIM1-204ENST00000549549 GJD4Q96KN9 370 aaPredicted RBP15.81■□□□□ 0.12
PRIM1-204ENST00000549549 NUTM2BA6NNL0 878 aaPredicted RBP15.8■□□□□ 0.12
PRIM1-204ENST00000549549 NUTM2EB1AL46 878 aaPredicted RBP15.8■□□□□ 0.12
PRIM1-204ENST00000549549 NUTM2DQ5VT03 806 aaPredicted RBP15.8■□□□□ 0.12
PRIM1-204ENST00000549549 NUTM2AQ8IVF1 878 aaPredicted RBP15.8■□□□□ 0.12
PRIM1-204ENST00000549549 CABLES1Q8TDN4 633 aa15.8■□□□□ 0.12
PRIM1-204ENST00000549549 GCGRP47871 477 aa15.78■□□□□ 0.12
PRIM1-204ENST00000549549 ZBTB3Q9H5J0 574 aa15.78■□□□□ 0.12
PRIM1-204ENST00000549549 ACIN1Q9UKV3 1341 aaKnown RBP15.77■□□□□ 0.12
PRIM1-204ENST00000549549 IRF5Q13568 498 aa15.77■□□□□ 0.12
PRIM1-204ENST00000549549 AEBP1Q8IUX7 1158 aa15.77■□□□□ 0.12
PRIM1-204ENST00000549549 RDH13Q8NBN7 331 aa15.77■□□□□ 0.12
PRIM1-204ENST00000549549 NDUFB9Q9Y6M9 179 aa15.76■□□□□ 0.11
PRIM1-204ENST00000549549 HOXA2O43364 376 aa15.75■□□□□ 0.11
PRIM1-204ENST00000549549 POTEJP0CG39 1038 aa15.75■□□□□ 0.11
PRIM1-204ENST00000549549 PDE4CQ08493 712 aa15.75■□□□□ 0.11
PRIM1-204ENST00000549549 FDX1P10109 184 aa15.73■□□□□ 0.11
PRIM1-204ENST00000549549 WASHC4Q2M389 1173 aa15.72■□□□□ 0.11
PRIM1-204ENST00000549549 RSPH4AQ5TD94 716 aa15.72■□□□□ 0.11
PRIM1-204ENST00000549549 PCDHGC3Q9UN70 934 aa15.72■□□□□ 0.11
PRIM1-204ENST00000549549 SMAPO00193 183 aa15.71■□□□□ 0.11
PRIM1-204ENST00000549549 HDGFL1Q5TGJ6 251 aa15.71■□□□□ 0.11
PRIM1-204ENST00000549549 ADAMTS19Q8TE59 1207 aa15.71■□□□□ 0.11
PRIM1-204ENST00000549549 GPR37L1O60883 481 aa15.7■□□□□ 0.1
PRIM1-204ENST00000549549 PBXIP1Q96AQ6 731 aa15.69■□□□□ 0.1
PRIM1-204ENST00000549549 TRIM34Q9BYJ4 488 aa15.69■□□□□ 0.1
PRIM1-204ENST00000549549 CTDSPL2Q05D32 466 aa15.68■□□□□ 0.1
PRIM1-204ENST00000549549 PROX2Q3B8N5 592 aa15.68■□□□□ 0.1
PRIM1-204ENST00000549549 SRPK2P78362 688 aaKnown RBP15.67■□□□□ 0.1
PRIM1-204ENST00000549549 HMX1Q9NP08 348 aaPredicted RBP15.67■□□□□ 0.1
PRIM1-204ENST00000549549 SLC10A3P09131 477 aa15.66■□□□□ 0.1
PRIM1-204ENST00000549549 MTMR2Q13614 643 aa15.63■□□□□ 0.09
PRIM1-204ENST00000549549 CFAP70Q5T0N1 1121 aa15.63■□□□□ 0.09
PRIM1-204ENST00000549549 KIAA1468Q9P260 1216 aa15.63■□□□□ 0.09
PRIM1-204ENST00000549549 HOXB1P14653 301 aaPredicted RBP15.62■□□□□ 0.09
PRIM1-204ENST00000549549 GUCA2AQ02747 115 aa15.61■□□□□ 0.09
PRIM1-204ENST00000549549 ZBED2Q9BTP6 218 aa15.61■□□□□ 0.09
PRIM1-204ENST00000549549 ALG2Q9H553 416 aa15.61■□□□□ 0.09
PRIM1-204ENST00000549549 HELBQ8NG08 1087 aaPredicted RBP15.6■□□□□ 0.09
PRIM1-204ENST00000549549 HLA-CQ95604 372 aa15.6■□□□□ 0.09
PRIM1-204ENST00000549549 GZF1Q9H116 711 aaPredicted RBP15.6■□□□□ 0.09
PRIM1-204ENST00000549549 SWT1Q5T5J6 900 aaKnown RBP15.59■□□□□ 0.09
PRIM1-204ENST00000549549 KCNK17Q96T54 332 aa15.59■□□□□ 0.09
PRIM1-204ENST00000549549 PPP1R12CQ9BZL4 782 aa15.59■□□□□ 0.09
PRIM1-204ENST00000549549 USTQ9Y2C2 406 aa15.59■□□□□ 0.09
PRIM1-204ENST00000549549 PATL2C9JE40 543 aaKnown RBP15.58■□□□□ 0.08
PRIM1-204ENST00000549549 POTEB2H3BUK9 544 aa15.58■□□□□ 0.08
PRIM1-204ENST00000549549 TMCO4Q5TGY1 634 aa15.58■□□□□ 0.08
PRIM1-204ENST00000549549 RGS22Q8NE09 1264 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms