RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-208ENST00000549205 STAC3Q96MF2 364 aa17.53■□□□□ 0.4
ERBB3-208ENST00000549205 STAG3Q9UJ98 1225 aa17.53■□□□□ 0.4
ERBB3-208ENST00000549205 PRAG1Q86YV5 1406 aa17.51■□□□□ 0.39
ERBB3-208ENST00000549205 KDM2AQ9Y2K7 1162 aa17.51■□□□□ 0.39
ERBB3-208ENST00000549205 TRPM1Q7Z4N2 1603 aa17.5■□□□□ 0.39
ERBB3-208ENST00000549205 NBPF8Q3BBV2 869 aa17.49■□□□□ 0.39
ERBB3-208ENST00000549205 KIAA1210Q9ULL0 1709 aa17.49■□□□□ 0.39
ERBB3-208ENST00000549205 NRXN1Q9ULB1 1477 aa17.49■□□□□ 0.39
ERBB3-208ENST00000549205 ZFYVE9O95405 1425 aa17.48■□□□□ 0.39
ERBB3-208ENST00000549205 RIMS2Q9UQ26 1411 aa17.47■□□□□ 0.39
ERBB3-208ENST00000549205 RALGAPBQ86X10 1494 aa17.46■□□□□ 0.39
ERBB3-208ENST00000549205 SLIT1O75093 1534 aa17.46■□□□□ 0.39
ERBB3-208ENST00000549205 TMEM2Q9UHN6 1383 aa17.45■□□□□ 0.38
ERBB3-208ENST00000549205 ADGRF5Q8IZF2 1346 aa17.45■□□□□ 0.38
ERBB3-208ENST00000549205 ARHGAP23Q9P227 1491 aa17.44■□□□□ 0.38
ERBB3-208ENST00000549205 VGFO15240 615 aaPredicted RBP17.44■□□□□ 0.38
ERBB3-208ENST00000549205 LAMC1P11047 1609 aa17.43■□□□□ 0.38
ERBB3-208ENST00000549205 THEMISQ8N1K5 641 aaPredicted RBP17.43■□□□□ 0.38
ERBB3-208ENST00000549205 PIK3C2GO75747 1445 aa17.43■□□□□ 0.38
ERBB3-208ENST00000549205 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.42■□□□□ 0.38
ERBB3-208ENST00000549205 NUTM2DQ5VT03 806 aaPredicted RBP17.41■□□□□ 0.38
ERBB3-208ENST00000549205 HDGFP51858 240 aaKnown RBP17.4■□□□□ 0.38
ERBB3-208ENST00000549205 IQGAP1P46940 1657 aa17.39■□□□□ 0.37
ERBB3-208ENST00000549205 POLR1AO95602 1720 aaPredicted RBP17.38■□□□□ 0.37
ERBB3-208ENST00000549205 NRXN3Q9Y4C0 1643 aa17.38■□□□□ 0.37
ERBB3-208ENST00000549205 GPRASP1Q5JY77 1395 aa17.38■□□□□ 0.37
ERBB3-208ENST00000549205 SETD1AO15047 1707 aaKnown RBP17.38■□□□□ 0.37
ERBB3-208ENST00000549205 SETBP1Q9Y6X0 1596 aa17.37■□□□□ 0.37
ERBB3-208ENST00000549205 ROCK2O75116 1388 aaKnown RBP17.37■□□□□ 0.37
ERBB3-208ENST00000549205 SCAF11Q99590 1463 aaKnown RBP17.37■□□□□ 0.37
ERBB3-208ENST00000549205 EID1Q9Y6B2 187 aa17.36■□□□□ 0.37
ERBB3-208ENST00000549205 ALKQ9UM73 1620 aa17.36■□□□□ 0.37
ERBB3-208ENST00000549205 LTKP29376 864 aa17.35■□□□□ 0.37
ERBB3-208ENST00000549205 NBPF1Q3BBV0 1214 aa17.35■□□□□ 0.37
ERBB3-208ENST00000549205 C14orf93Q9H972 538 aaKnown RBP17.35■□□□□ 0.37
ERBB3-208ENST00000549205 PLEKHG1Q9ULL1 1385 aa17.35■□□□□ 0.37
ERBB3-208ENST00000549205 CFAP70Q5T0N1 1121 aa17.34■□□□□ 0.37
ERBB3-208ENST00000549205 TXNDC2Q86VQ3 553 aa17.34■□□□□ 0.37
ERBB3-208ENST00000549205 ADGRB1O14514 1584 aa17.33■□□□□ 0.37
ERBB3-208ENST00000549205 LMTK3Q96Q04 1460 aa17.33■□□□□ 0.37
ERBB3-208ENST00000549205 CARD11Q9BXL7 1154 aa17.33■□□□□ 0.36
ERBB3-208ENST00000549205 ASXL1Q8IXJ9 1541 aa17.31■□□□□ 0.36
ERBB3-208ENST00000549205 ANKLE2Q86XL3 938 aa17.3■□□□□ 0.36
ERBB3-208ENST00000549205 DIP2AQ14689 1571 aa17.3■□□□□ 0.36
ERBB3-208ENST00000549205 USP47Q96K76 1375 aa17.29■□□□□ 0.36
ERBB3-208ENST00000549205 SENP3Q9H4L4 574 aaPredicted RBP17.29■□□□□ 0.36
ERBB3-208ENST00000549205 ADAMTS13Q76LX8 1427 aa17.29■□□□□ 0.36
ERBB3-208ENST00000549205 EIF4G2P78344 907 aaKnown RBP eCLIP17.28■□□□□ 0.36
ERBB3-208ENST00000549205 MED14O60244 1454 aa17.28■□□□□ 0.36
ERBB3-208ENST00000549205 ARHGEF28Q8N1W1 1705 aaKnown RBP17.27■□□□□ 0.35
ERBB3-208ENST00000549205 HSPA5P11021 654 aaKnown RBP17.26■□□□□ 0.35
ERBB3-208ENST00000549205 BCANQ96GW7 911 aa17.26■□□□□ 0.35
ERBB3-208ENST00000549205 STRCQ7RTU9 1775 aa17.25■□□□□ 0.35
ERBB3-208ENST00000549205 KNDC1Q76NI1 1749 aa17.25■□□□□ 0.35
ERBB3-208ENST00000549205 TMEM132EQ6IEE7 984 aa17.25■□□□□ 0.35
ERBB3-208ENST00000549205 NPHP4O75161 1426 aaPredicted RBP17.24■□□□□ 0.35
ERBB3-208ENST00000549205 YTHDC2Q9H6S0 1430 aaKnown RBP17.23■□□□□ 0.35
ERBB3-208ENST00000549205 HSPA2P54652 639 aa17.23■□□□□ 0.35
ERBB3-208ENST00000549205 METP08581 1390 aa17.23■□□□□ 0.35
ERBB3-208ENST00000549205 EIF3AQ14152 1382 aaKnown RBP17.23■□□□□ 0.35
ERBB3-208ENST00000549205 NCKAP5LQ9HCH0 1330 aa17.22■□□□□ 0.35
ERBB3-208ENST00000549205 CHD2O14647 1828 aaKnown RBP17.22■□□□□ 0.35
ERBB3-208ENST00000549205 ZNF316A6NFI3 1004 aaPredicted RBP17.22■□□□□ 0.35
ERBB3-208ENST00000549205 TBX22Q9Y458 520 aa17.22■□□□□ 0.35
ERBB3-208ENST00000549205 QRICH2Q9H0J4 1663 aa17.21■□□□□ 0.35
ERBB3-208ENST00000549205 LRPPRCP42704 1394 aaKnown RBP17.21■□□□□ 0.35
ERBB3-208ENST00000549205 SLC26A8Q96RN1 970 aa17.21■□□□□ 0.35
ERBB3-208ENST00000549205 DLC1Q96QB1 1528 aa17.21■□□□□ 0.34
ERBB3-208ENST00000549205 HIRIP3Q9BW71 556 aaPredicted RBP17.2■□□□□ 0.34
ERBB3-208ENST00000549205 ST20-MTHFSA0A0A6YYL1 179 aa17.19■□□□□ 0.34
ERBB3-208ENST00000549205 XRN1Q8IZH2 1706 aaKnown RBP17.18■□□□□ 0.34
ERBB3-208ENST00000549205 ABCC11Q96J66 1382 aa17.18■□□□□ 0.34
ERBB3-208ENST00000549205 PIK3R4Q99570 1358 aa17.18■□□□□ 0.34
ERBB3-208ENST00000549205 CPS1P31327 1500 aa17.18■□□□□ 0.34
ERBB3-208ENST00000549205 TRAK1Q9UPV9 953 aa17.18■□□□□ 0.34
ERBB3-208ENST00000549205 TECPR2O15040 1411 aa17.18■□□□□ 0.34
ERBB3-208ENST00000549205 STK26Q9P289 416 aa17.17■□□□□ 0.34
ERBB3-208ENST00000549205 PTPRUQ92729 1446 aa17.16■□□□□ 0.34
ERBB3-208ENST00000549205 CENPJQ9HC77 1338 aaPredicted RBP17.15■□□□□ 0.34
ERBB3-208ENST00000549205 TESK2Q96S53 571 aa17.14■□□□□ 0.33
ERBB3-208ENST00000549205 SBNO2Q9Y2G9 1366 aa17.14■□□□□ 0.33
ERBB3-208ENST00000549205 FAM135BQ49AJ0 1406 aa17.13■□□□□ 0.33
ERBB3-208ENST00000549205 NWD1Q149M9 1564 aa17.12■□□□□ 0.33
ERBB3-208ENST00000549205 PTCH1Q13635 1447 aa17.12■□□□□ 0.33
ERBB3-208ENST00000549205 SIRT1Q96EB6 747 aa17.11■□□□□ 0.33
ERBB3-208ENST00000549205 AMOTL2Q9Y2J4 779 aa17.11■□□□□ 0.33
ERBB3-208ENST00000549205 PRAM1Q96QH2 718 aa17.1■□□□□ 0.33
ERBB3-208ENST00000549205 ROBO2Q9HCK4 1378 aa17.1■□□□□ 0.33
ERBB3-208ENST00000549205 STRCP1A6NGW2 1772 aa17.1■□□□□ 0.33
ERBB3-208ENST00000549205 SLC24A1O60721 1099 aa17.09■□□□□ 0.33
ERBB3-208ENST00000549205 POGKQ9P215 609 aa17.09■□□□□ 0.33
ERBB3-208ENST00000549205 CCDC7Q96M83 1385 aa17.08■□□□□ 0.32
ERBB3-208ENST00000549205 DISP3Q9P2K9 1392 aa17.08■□□□□ 0.32
ERBB3-208ENST00000549205 C11orf95C9JLR9 678 aaPredicted RBP17.08■□□□□ 0.32
ERBB3-208ENST00000549205 PLEKHH1Q9ULM0 1364 aa17.07■□□□□ 0.32
ERBB3-208ENST00000549205 WASHC2AQ641Q2 1341 aa17.07■□□□□ 0.32
ERBB3-208ENST00000549205 TMF1P82094 1093 aa17.07■□□□□ 0.32
ERBB3-208ENST00000549205 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.07■□□□□ 0.32
ERBB3-208ENST00000549205 KIF7Q2M1P5 1343 aa17.06■□□□□ 0.32
ERBB3-208ENST00000549205 KCNA6P17658 529 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 589.3 ms