RNA–Protein interactions for RNA: ENST00000548173.5

PRIM1-203, Transcript of DNA primase subunit 1, humanhuman

TSL 4

Gene PRIM1, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-203ENST00000548173 TMEM131LA2VDJ0 1609 aa11.91□□□□□ -0.5
PRIM1-203ENST00000548173 ZFYVE9O95405 1425 aa11.9□□□□□ -0.5
PRIM1-203ENST00000548173 TRIM52Q96A61 297 aa11.9□□□□□ -0.5
PRIM1-203ENST00000548173 MYO5BQ9ULV0 1848 aa11.9□□□□□ -0.5
PRIM1-203ENST00000548173 CHGAP10645 457 aaKnown RBP11.89□□□□□ -0.51
PRIM1-203ENST00000548173 RIMS2Q9UQ26 1411 aa11.88□□□□□ -0.51
PRIM1-203ENST00000548173 STRCP1A6NGW2 1772 aa11.88□□□□□ -0.51
PRIM1-203ENST00000548173 HDGFP51858 240 aaKnown RBP11.88□□□□□ -0.51
PRIM1-203ENST00000548173 SPHKAPQ2M3C7 1700 aa11.88□□□□□ -0.51
PRIM1-203ENST00000548173 SLC26A8Q96RN1 970 aa11.87□□□□□ -0.51
PRIM1-203ENST00000548173 UBAP1LF5GYI3 381 aa11.86□□□□□ -0.51
PRIM1-203ENST00000548173 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.86□□□□□ -0.51
PRIM1-203ENST00000548173 SLC4A1APQ9BWU0 796 aaKnown RBP11.86□□□□□ -0.51
PRIM1-203ENST00000548173 PLEKHG1Q9ULL1 1385 aa11.86□□□□□ -0.51
PRIM1-203ENST00000548173 LRRC7Q96NW7 1537 aa11.86□□□□□ -0.51
PRIM1-203ENST00000548173 PPP1R15AO75807 674 aaPredicted RBP11.85□□□□□ -0.51
PRIM1-203ENST00000548173 TRPM2O94759 1503 aa11.85□□□□□ -0.51
PRIM1-203ENST00000548173 CACNB1Q02641 598 aaPredicted RBP11.84□□□□□ -0.51
PRIM1-203ENST00000548173 BCANQ96GW7 911 aa11.84□□□□□ -0.51
PRIM1-203ENST00000548173 KCNA6P17658 529 aa11.83□□□□□ -0.52
PRIM1-203ENST00000548173 NUTM2DQ5VT03 806 aaPredicted RBP11.83□□□□□ -0.52
PRIM1-203ENST00000548173 SETD5Q9C0A6 1442 aa11.83□□□□□ -0.52
PRIM1-203ENST00000548173 CLTCL1P53675 1640 aa11.82□□□□□ -0.52
PRIM1-203ENST00000548173 TOM1O60784 492 aa11.82□□□□□ -0.52
PRIM1-203ENST00000548173 TBX22Q9Y458 520 aa11.82□□□□□ -0.52
PRIM1-203ENST00000548173 ACIN1Q9UKV3 1341 aaKnown RBP11.82□□□□□ -0.52
PRIM1-203ENST00000548173 ADAMTS13Q76LX8 1427 aa11.81□□□□□ -0.52
PRIM1-203ENST00000548173 CNKSR2Q8WXI2 1034 aa11.81□□□□□ -0.52
PRIM1-203ENST00000548173 MPHOSPH9Q99550 1183 aa11.81□□□□□ -0.52
PRIM1-203ENST00000548173 ZNF326Q5BKZ1 582 aaKnown RBP11.8□□□□□ -0.52
PRIM1-203ENST00000548173 NWD1Q149M9 1564 aa11.79□□□□□ -0.52
PRIM1-203ENST00000548173 ALKQ9UM73 1620 aa11.79□□□□□ -0.52
PRIM1-203ENST00000548173 XIRP1Q702N8 1843 aaKnown RBP11.79□□□□□ -0.52
PRIM1-203ENST00000548173 TMEM94Q12767 1356 aa11.79□□□□□ -0.52
PRIM1-203ENST00000548173 RAB3GAP2Q9H2M9 1393 aa11.79□□□□□ -0.52
PRIM1-203ENST00000548173 NKTRP30414 1462 aaKnown RBP11.78□□□□□ -0.52
PRIM1-203ENST00000548173 PIP4K2BP78356 416 aa11.78□□□□□ -0.52
PRIM1-203ENST00000548173 PROSER2Q86WR7 435 aaPredicted RBP11.78□□□□□ -0.52
PRIM1-203ENST00000548173 CHD2O14647 1828 aaKnown RBP11.78□□□□□ -0.52
PRIM1-203ENST00000548173 KIF1BO60333 1816 aa11.78□□□□□ -0.52
PRIM1-203ENST00000548173 NEXMIFQ5QGS0 1516 aa11.77□□□□□ -0.52
PRIM1-203ENST00000548173 DIP2AQ14689 1571 aa11.77□□□□□ -0.53
PRIM1-203ENST00000548173 HOXD11P31277 338 aaPredicted RBP11.77□□□□□ -0.53
PRIM1-203ENST00000548173 PIK3R4Q99570 1358 aa11.77□□□□□ -0.53
PRIM1-203ENST00000548173 SETBP1Q9Y6X0 1596 aa11.76□□□□□ -0.53
PRIM1-203ENST00000548173 RBM33Q96EV2 1170 aaKnown RBP11.76□□□□□ -0.53
PRIM1-203ENST00000548173 NRXN3Q9Y4C0 1643 aa11.75□□□□□ -0.53
PRIM1-203ENST00000548173 RPGRIP1LQ68CZ1 1315 aa11.75□□□□□ -0.53
PRIM1-203ENST00000548173 CCDC144AA2RUR9 1427 aa11.75□□□□□ -0.53
PRIM1-203ENST00000548173 VGFO15240 615 aaPredicted RBP11.74□□□□□ -0.53
PRIM1-203ENST00000548173 HRCP23327 699 aa11.74□□□□□ -0.53
PRIM1-203ENST00000548173 PTPRUQ92729 1446 aa11.74□□□□□ -0.53
PRIM1-203ENST00000548173 HSPA1LP34931 641 aa11.73□□□□□ -0.53
PRIM1-203ENST00000548173 SPATA31E1Q6ZUB1 1445 aa11.73□□□□□ -0.53
PRIM1-203ENST00000548173 AMOTL2Q9Y2J4 779 aa11.73□□□□□ -0.53
PRIM1-203ENST00000548173 NCOA3Q9Y6Q9 1424 aa11.72□□□□□ -0.53
PRIM1-203ENST00000548173 METP08581 1390 aa11.72□□□□□ -0.53
PRIM1-203ENST00000548173 MSH6P52701 1360 aa11.71□□□□□ -0.53
PRIM1-203ENST00000548173 PPLO60437 1756 aa11.7□□□□□ -0.54
PRIM1-203ENST00000548173 RGL3Q3MIN7 710 aa11.7□□□□□ -0.54
PRIM1-203ENST00000548173 RNF216Q9NWF9 866 aaPredicted RBP11.7□□□□□ -0.54
PRIM1-203ENST00000548173 FAM135BQ49AJ0 1406 aa11.69□□□□□ -0.54
PRIM1-203ENST00000548173 XRN1Q8IZH2 1706 aaKnown RBP11.69□□□□□ -0.54
PRIM1-203ENST00000548173 ADGRF5Q8IZF2 1346 aa11.68□□□□□ -0.54
PRIM1-203ENST00000548173 C19orf44Q9H6X5 657 aa11.68□□□□□ -0.54
PRIM1-203ENST00000548173 ANKRD30BQ9BXX2 1392 aa11.67□□□□□ -0.54
PRIM1-203ENST00000548173 SETD1AO15047 1707 aaKnown RBP11.67□□□□□ -0.54
PRIM1-203ENST00000548173 C14orf37Q86TY3 774 aa11.67□□□□□ -0.54
PRIM1-203ENST00000548173 SLAIN2Q9P270 581 aa11.67□□□□□ -0.54
PRIM1-203ENST00000548173 IFT172Q9UG01 1749 aa11.66□□□□□ -0.54
PRIM1-203ENST00000548173 CADPS2Q86UW7 1296 aa11.65□□□□□ -0.54
PRIM1-203ENST00000548173 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.65□□□□□ -0.54
PRIM1-203ENST00000548173 DISP3Q9P2K9 1392 aa11.65□□□□□ -0.55
PRIM1-203ENST00000548173 PRAG1Q86YV5 1406 aa11.64□□□□□ -0.55
PRIM1-203ENST00000548173 ATF3P18847 181 aa11.64□□□□□ -0.55
PRIM1-203ENST00000548173 ROBO1Q9Y6N7 1651 aa11.64□□□□□ -0.55
PRIM1-203ENST00000548173 PIK3C2GO75747 1445 aa11.63□□□□□ -0.55
PRIM1-203ENST00000548173 DCCP43146 1447 aa11.63□□□□□ -0.55
PRIM1-203ENST00000548173 PTCH1Q13635 1447 aa11.63□□□□□ -0.55
PRIM1-203ENST00000548173 ROBO2Q9HCK4 1378 aa11.63□□□□□ -0.55
PRIM1-203ENST00000548173 NRXN1Q9ULB1 1477 aa11.62□□□□□ -0.55
PRIM1-203ENST00000548173 ADGRL3Q9HAR2 1447 aa11.61□□□□□ -0.55
PRIM1-203ENST00000548173 MYOM2P54296 1465 aa11.61□□□□□ -0.55
PRIM1-203ENST00000548173 C14orf93Q9H972 538 aaKnown RBP11.6□□□□□ -0.55
PRIM1-203ENST00000548173 ASXL1Q8IXJ9 1541 aa11.6□□□□□ -0.55
PRIM1-203ENST00000548173 MED1Q15648 1581 aaPredicted RBP11.59□□□□□ -0.55
PRIM1-203ENST00000548173 LRPPRCP42704 1394 aaKnown RBP11.59□□□□□ -0.55
PRIM1-203ENST00000548173 ABCC11Q96J66 1382 aa11.59□□□□□ -0.55
PRIM1-203ENST00000548173 NCBP3Q53F19 620 aaKnown RBP11.59□□□□□ -0.55
PRIM1-203ENST00000548173 TMEM132EQ6IEE7 984 aa11.59□□□□□ -0.55
PRIM1-203ENST00000548173 NALCNQ8IZF0 1738 aa11.59□□□□□ -0.55
PRIM1-203ENST00000548173 TECPR2O15040 1411 aa11.59□□□□□ -0.55
PRIM1-203ENST00000548173 MST1RQ04912 1400 aa11.59□□□□□ -0.55
PRIM1-203ENST00000548173 CFAP70Q5T0N1 1121 aa11.58□□□□□ -0.56
PRIM1-203ENST00000548173 BRINP3Q76B58 766 aa11.58□□□□□ -0.56
PRIM1-203ENST00000548173 STK26Q9P289 416 aa11.58□□□□□ -0.56
PRIM1-203ENST00000548173 ILDR2Q71H61 639 aa11.57□□□□□ -0.56
PRIM1-203ENST00000548173 STAC3Q96MF2 364 aa11.57□□□□□ -0.56
PRIM1-203ENST00000548173 RNF39Q9H2S5 420 aa11.57□□□□□ -0.56
PRIM1-203ENST00000548173 DHX57Q6P158 1386 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms