RNA–Protein interactions for RNA: ENST00000548126.1

CCDC59-203, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 984 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-203ENST00000548126 LRCH3Q96II8 777 aa12.73□□□□□ -0.37
CCDC59-203ENST00000548126 GRIN2BQ13224 1484 aa12.72□□□□□ -0.37
CCDC59-203ENST00000548126 EN1Q05925 392 aaPredicted RBP12.72□□□□□ -0.37
CCDC59-203ENST00000548126 PDIA6Q15084 440 aa12.72□□□□□ -0.37
CCDC59-203ENST00000548126 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.72□□□□□ -0.37
CCDC59-203ENST00000548126 ERCC6L2Q5T890 1561 aa12.7□□□□□ -0.38
CCDC59-203ENST00000548126 TSR3Q9UJK0 312 aaKnown RBP12.7□□□□□ -0.38
CCDC59-203ENST00000548126 KCNC4Q03721 635 aa12.69□□□□□ -0.38
CCDC59-203ENST00000548126 FAM69CQ0P6D2 419 aa12.69□□□□□ -0.38
CCDC59-203ENST00000548126 WDR70Q9NW82 654 aa12.69□□□□□ -0.38
CCDC59-203ENST00000548126 WBP1LQ9NX94 342 aa12.69□□□□□ -0.38
CCDC59-203ENST00000548126 CERKQ8TCT0 537 aa12.68□□□□□ -0.38
CCDC59-203ENST00000548126 E2F4Q16254 413 aa12.67□□□□□ -0.38
CCDC59-203ENST00000548126 HPS5Q9UPZ3 1129 aa12.66□□□□□ -0.38
CCDC59-203ENST00000548126 TSR1Q2NL82 804 aaKnown RBP12.63□□□□□ -0.39
CCDC59-203ENST00000548126 ABCC10Q5T3U5 1492 aa12.63□□□□□ -0.39
CCDC59-203ENST00000548126 FGD5Q6ZNL6 1462 aa12.63□□□□□ -0.39
CCDC59-203ENST00000548126 FBXO41Q8TF61 875 aa12.62□□□□□ -0.39
CCDC59-203ENST00000548126 KDM6BO15054 1643 aa12.62□□□□□ -0.39
CCDC59-203ENST00000548126 CEP170Q5SW79 1584 aa12.61□□□□□ -0.39
CCDC59-203ENST00000548126 PPP4CP60510 307 aa12.61□□□□□ -0.39
CCDC59-203ENST00000548126 ARIH1Q9Y4X5 557 aaPredicted RBP12.61□□□□□ -0.39
CCDC59-203ENST00000548126 PRSS12P56730 875 aa12.6□□□□□ -0.39
CCDC59-203ENST00000548126 CDCA7LQ96GN5 454 aa12.6□□□□□ -0.39
CCDC59-203ENST00000548126 TSKSQ9UJT2 592 aa12.6□□□□□ -0.39
CCDC59-203ENST00000548126 PBRM1Q86U86 1689 aa12.59□□□□□ -0.39
CCDC59-203ENST00000548126 NBPF26B4DH59 902 aa12.59□□□□□ -0.39
CCDC59-203ENST00000548126 HDGFP51858 240 aaKnown RBP12.58□□□□□ -0.4
CCDC59-203ENST00000548126 HECW2Q9P2P5 1572 aa12.58□□□□□ -0.4
CCDC59-203ENST00000548126 GRXCR2A6NFK2 248 aa12.57□□□□□ -0.4
CCDC59-203ENST00000548126 CFAP44Q96MT7 982 aa12.56□□□□□ -0.4
CCDC59-203ENST00000548126 RTN4Q9NQC3 1192 aaKnown RBP12.56□□□□□ -0.4
CCDC59-203ENST00000548126 PAXIP1Q6ZW49 1069 aaPredicted RBP12.55□□□□□ -0.4
CCDC59-203ENST00000548126 SHROOM2Q13796 1616 aa12.55□□□□□ -0.4
CCDC59-203ENST00000548126 GRIN2AQ12879 1464 aa12.54□□□□□ -0.4
CCDC59-203ENST00000548126 NECTIN2Q92692 538 aa12.54□□□□□ -0.4
CCDC59-203ENST00000548126 DIP2BQ9P265 1576 aa12.54□□□□□ -0.4
CCDC59-203ENST00000548126 NUP160Q12769 1436 aa12.54□□□□□ -0.4
CCDC59-203ENST00000548126 ADGRL1O94910 1474 aa12.53□□□□□ -0.4
CCDC59-203ENST00000548126 SAMD7Q7Z3H4 446 aa12.53□□□□□ -0.4
CCDC59-203ENST00000548126 RBM27Q9P2N5 1060 aaKnown RBP12.53□□□□□ -0.4
CCDC59-203ENST00000548126 TSPOAP1O95153 1857 aa12.53□□□□□ -0.4
CCDC59-203ENST00000548126 MAPKBP1O60336 1514 aa12.52□□□□□ -0.4
CCDC59-203ENST00000548126 TATDN2Q93075 761 aa12.52□□□□□ -0.41
CCDC59-203ENST00000548126 PNMA3Q9UL41 463 aa12.52□□□□□ -0.41
CCDC59-203ENST00000548126 CUX1P39880 1505 aa12.52□□□□□ -0.41
CCDC59-203ENST00000548126 LAPTM4AQ15012 233 aa12.5□□□□□ -0.41
CCDC59-203ENST00000548126 PRG4Q92954 1404 aaPredicted RBP12.49□□□□□ -0.41
CCDC59-203ENST00000548126 SMAPO00193 183 aa12.49□□□□□ -0.41
CCDC59-203ENST00000548126 SLC4A3P48751 1232 aa12.48□□□□□ -0.41
CCDC59-203ENST00000548126 ABCA5Q8WWZ7 1642 aa12.48□□□□□ -0.41
CCDC59-203ENST00000548126 Q6ZNB5 142 aa12.47□□□□□ -0.41
CCDC59-203ENST00000548126 ABCA10Q8WWZ4 1543 aa12.47□□□□□ -0.41
CCDC59-203ENST00000548126 LMTK3Q96Q04 1460 aa12.46□□□□□ -0.41
CCDC59-203ENST00000548126 RNF40O75150 1001 aa12.46□□□□□ -0.41
CCDC59-203ENST00000548126 IL21Q9HBE4 155 aa12.46□□□□□ -0.41
CCDC59-203ENST00000548126 OSBPP22059 807 aa12.45□□□□□ -0.42
CCDC59-203ENST00000548126 NUDT18Q6ZVK8 323 aa12.45□□□□□ -0.42
CCDC59-203ENST00000548126 FAM198AQ9UFP1 575 aa12.44□□□□□ -0.42
CCDC59-203ENST00000548126 TJAP1Q5JTD0 557 aa12.43□□□□□ -0.42
CCDC59-203ENST00000548126 PRIM1P49642 420 aaKnown RBP12.42□□□□□ -0.42
CCDC59-203ENST00000548126 MTRQ99707 1265 aa12.42□□□□□ -0.42
CCDC59-203ENST00000548126 ADAMTS12P58397 1594 aa12.42□□□□□ -0.42
CCDC59-203ENST00000548126 FHAD1B1AJZ9 1412 aa12.41□□□□□ -0.42
CCDC59-203ENST00000548126 SLF2Q8IX21 1173 aa12.41□□□□□ -0.42
CCDC59-203ENST00000548126 CDHR5Q9HBB8 845 aa12.41□□□□□ -0.42
CCDC59-203ENST00000548126 ADCY10Q96PN6 1610 aa12.4□□□□□ -0.42
CCDC59-203ENST00000548126 SOCS7O14512 581 aa12.4□□□□□ -0.42
CCDC59-203ENST00000548126 GGCXP38435 758 aa12.37□□□□□ -0.43
CCDC59-203ENST00000548126 PRR14Q9BWN1 585 aa12.37□□□□□ -0.43
CCDC59-203ENST00000548126 PADI6Q6TGC4 694 aa12.35□□□□□ -0.43
CCDC59-203ENST00000548126 TTC13Q8NBP0 860 aa12.35□□□□□ -0.43
CCDC59-203ENST00000548126 PRKD2Q9BZL6 878 aa12.35□□□□□ -0.43
CCDC59-203ENST00000548126 C3orf80F5H4A9 247 aa12.34□□□□□ -0.43
CCDC59-203ENST00000548126 GFRA3O60609 400 aa12.34□□□□□ -0.43
CCDC59-203ENST00000548126 ILDR2Q71H61 639 aa12.34□□□□□ -0.43
CCDC59-203ENST00000548126 V9GY48 417 aaPredicted RBP12.34□□□□□ -0.43
CCDC59-203ENST00000548126 PPP1R18Q6NYC8 613 aa12.33□□□□□ -0.44
CCDC59-203ENST00000548126 ARHGEF1Q92888 912 aaKnown RBP12.33□□□□□ -0.44
CCDC59-203ENST00000548126 COL17A1Q9UMD9 1497 aaPredicted RBP12.33□□□□□ -0.44
CCDC59-203ENST00000548126 PPRC1Q5VV67 1664 aaKnown RBP12.32□□□□□ -0.44
CCDC59-203ENST00000548126 APLP1P51693 650 aa12.32□□□□□ -0.44
CCDC59-203ENST00000548126 SWT1Q5T5J6 900 aaKnown RBP12.32□□□□□ -0.44
CCDC59-203ENST00000548126 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.32□□□□□ -0.44
CCDC59-203ENST00000548126 TOP2BQ02880 1626 aa12.31□□□□□ -0.44
CCDC59-203ENST00000548126 WRNQ14191 1432 aaPredicted RBP eCLIP12.3□□□□□ -0.44
CCDC59-203ENST00000548126 NPDC1Q9NQX5 325 aaPredicted RBP12.3□□□□□ -0.44
CCDC59-203ENST00000548126 ERICH3Q5RHP9 1530 aa12.3□□□□□ -0.44
CCDC59-203ENST00000548126 GLI2P10070 1586 aa12.3□□□□□ -0.44
CCDC59-203ENST00000548126 ZNF516Q92618 1163 aa12.28□□□□□ -0.44
CCDC59-203ENST00000548126 NRG2O14511 850 aaPredicted RBP12.27□□□□□ -0.45
CCDC59-203ENST00000548126 DISP3Q9P2K9 1392 aa12.27□□□□□ -0.45
CCDC59-203ENST00000548126 PLB1Q6P1J6 1458 aa12.27□□□□□ -0.45
CCDC59-203ENST00000548126 TRAF7Q6Q0C0 670 aa12.26□□□□□ -0.45
CCDC59-203ENST00000548126 TMUB1Q9BVT8 246 aa12.26□□□□□ -0.45
CCDC59-203ENST00000548126 RUSC2Q8N2Y8 1516 aa12.26□□□□□ -0.45
CCDC59-203ENST00000548126 COPS2P61201 443 aa12.25□□□□□ -0.45
CCDC59-203ENST00000548126 RBM46Q8TBY0 533 aaKnown RBP12.25□□□□□ -0.45
CCDC59-203ENST00000548126 EYA1Q99502 592 aa12.25□□□□□ -0.45
CCDC59-203ENST00000548126 ASXL2Q76L83 1435 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms