RNA–Protein interactions for RNA: ENST00000547381.1

SSH1-206, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-206ENST00000547381 LRRC7Q96NW7 1537 aa18.63■□□□□ 0.57
SSH1-206ENST00000547381 MYO5BQ9ULV0 1848 aa18.63■□□□□ 0.57
SSH1-206ENST00000547381 TRIM52Q96A61 297 aa18.62■□□□□ 0.57
SSH1-206ENST00000547381 SLC26A8Q96RN1 970 aa18.62■□□□□ 0.57
SSH1-206ENST00000547381 SPHKAPQ2M3C7 1700 aa18.61■□□□□ 0.57
SSH1-206ENST00000547381 PLEKHG1Q9ULL1 1385 aa18.61■□□□□ 0.57
SSH1-206ENST00000547381 KCNA6P17658 529 aa18.6■□□□□ 0.57
SSH1-206ENST00000547381 SCAF1Q9H7N4 1312 aaKnown RBP18.57■□□□□ 0.56
SSH1-206ENST00000547381 PIP4K2BP78356 416 aa18.57■□□□□ 0.56
SSH1-206ENST00000547381 SLC4A1APQ9BWU0 796 aaKnown RBP18.57■□□□□ 0.56
SSH1-206ENST00000547381 ACIN1Q9UKV3 1341 aaKnown RBP18.56■□□□□ 0.56
SSH1-206ENST00000547381 TRPM2O94759 1503 aa18.56■□□□□ 0.56
SSH1-206ENST00000547381 TBX22Q9Y458 520 aa18.56■□□□□ 0.56
SSH1-206ENST00000547381 ZNF326Q5BKZ1 582 aaKnown RBP18.53■□□□□ 0.56
SSH1-206ENST00000547381 NUTM2DQ5VT03 806 aaPredicted RBP18.53■□□□□ 0.56
SSH1-206ENST00000547381 PROSER2Q86WR7 435 aaPredicted RBP18.53■□□□□ 0.56
SSH1-206ENST00000547381 NKTRP30414 1462 aaKnown RBP18.52■□□□□ 0.56
SSH1-206ENST00000547381 SENP3Q9H4L4 574 aaPredicted RBP18.52■□□□□ 0.56
SSH1-206ENST00000547381 DIP2AQ14689 1571 aa18.51■□□□□ 0.55
SSH1-206ENST00000547381 NWD1Q149M9 1564 aa18.51■□□□□ 0.55
SSH1-206ENST00000547381 TMEM94Q12767 1356 aa18.51■□□□□ 0.55
SSH1-206ENST00000547381 CLTCL1P53675 1640 aa18.5■□□□□ 0.55
SSH1-206ENST00000547381 PIK3R4Q99570 1358 aa18.5■□□□□ 0.55
SSH1-206ENST00000547381 ADAMTS13Q76LX8 1427 aa18.49■□□□□ 0.55
SSH1-206ENST00000547381 ALKQ9UM73 1620 aa18.49■□□□□ 0.55
SSH1-206ENST00000547381 CHD2O14647 1828 aaKnown RBP18.49■□□□□ 0.55
SSH1-206ENST00000547381 XIRP1Q702N8 1843 aaKnown RBP18.49■□□□□ 0.55
SSH1-206ENST00000547381 HSPA1LP34931 641 aa18.48■□□□□ 0.55
SSH1-206ENST00000547381 KIF1BO60333 1816 aa18.48■□□□□ 0.55
SSH1-206ENST00000547381 SETD5Q9C0A6 1442 aa18.47■□□□□ 0.55
SSH1-206ENST00000547381 MPHOSPH9Q99550 1183 aa18.46■□□□□ 0.55
SSH1-206ENST00000547381 SETBP1Q9Y6X0 1596 aa18.45■□□□□ 0.54
SSH1-206ENST00000547381 MSH6P52701 1360 aa18.44■□□□□ 0.54
SSH1-206ENST00000547381 NCOA3Q9Y6Q9 1424 aa18.44■□□□□ 0.54
SSH1-206ENST00000547381 RPGRIP1LQ68CZ1 1315 aa18.44■□□□□ 0.54
SSH1-206ENST00000547381 NEXMIFQ5QGS0 1516 aa18.44■□□□□ 0.54
SSH1-206ENST00000547381 VGFO15240 615 aaPredicted RBP18.43■□□□□ 0.54
SSH1-206ENST00000547381 RBM33Q96EV2 1170 aaKnown RBP18.43■□□□□ 0.54
SSH1-206ENST00000547381 DISP3Q9P2K9 1392 aa18.42■□□□□ 0.54
SSH1-206ENST00000547381 FOXD1Q16676 465 aa18.42■□□□□ 0.54
SSH1-206ENST00000547381 CCDC144AA2RUR9 1427 aa18.4■□□□□ 0.54
SSH1-206ENST00000547381 FAM135BQ49AJ0 1406 aa18.4■□□□□ 0.54
SSH1-206ENST00000547381 AMOTL2Q9Y2J4 779 aa18.4■□□□□ 0.54
SSH1-206ENST00000547381 NRXN3Q9Y4C0 1643 aa18.4■□□□□ 0.54
SSH1-206ENST00000547381 C14orf37Q86TY3 774 aa18.39■□□□□ 0.53
SSH1-206ENST00000547381 RAB3GAP2Q9H2M9 1393 aa18.38■□□□□ 0.53
SSH1-206ENST00000547381 C19orf44Q9H6X5 657 aa18.37■□□□□ 0.53
SSH1-206ENST00000547381 SLAIN2Q9P270 581 aa18.37■□□□□ 0.53
SSH1-206ENST00000547381 METP08581 1390 aa18.36■□□□□ 0.53
SSH1-206ENST00000547381 PTPRUQ92729 1446 aa18.36■□□□□ 0.53
SSH1-206ENST00000547381 CADPS2Q86UW7 1296 aa18.35■□□□□ 0.53
SSH1-206ENST00000547381 ATF3P18847 181 aa18.34■□□□□ 0.53
SSH1-206ENST00000547381 HRCP23327 699 aa18.34■□□□□ 0.53
SSH1-206ENST00000547381 XRN1Q8IZH2 1706 aaKnown RBP18.33■□□□□ 0.52
SSH1-206ENST00000547381 SPATA31E1Q6ZUB1 1445 aa18.32■□□□□ 0.52
SSH1-206ENST00000547381 PPLO60437 1756 aa18.32■□□□□ 0.52
SSH1-206ENST00000547381 ROBO1Q9Y6N7 1651 aa18.31■□□□□ 0.52
SSH1-206ENST00000547381 RGL3Q3MIN7 710 aa18.31■□□□□ 0.52
SSH1-206ENST00000547381 ANKRD30BQ9BXX2 1392 aa18.3■□□□□ 0.52
SSH1-206ENST00000547381 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.29■□□□□ 0.52
SSH1-206ENST00000547381 DCCP43146 1447 aa18.29■□□□□ 0.52
SSH1-206ENST00000547381 MED1Q15648 1581 aaPredicted RBP18.27■□□□□ 0.52
SSH1-206ENST00000547381 SETD1AO15047 1707 aaKnown RBP18.26■□□□□ 0.51
SSH1-206ENST00000547381 ADGRF5Q8IZF2 1346 aa18.25■□□□□ 0.51
SSH1-206ENST00000547381 PTCH1Q13635 1447 aa18.25■□□□□ 0.51
SSH1-206ENST00000547381 PRAG1Q86YV5 1406 aa18.24■□□□□ 0.51
SSH1-206ENST00000547381 IFT172Q9UG01 1749 aa18.24■□□□□ 0.51
SSH1-206ENST00000547381 ILDR2Q71H61 639 aa18.23■□□□□ 0.51
SSH1-206ENST00000547381 ADGRL3Q9HAR2 1447 aa18.23■□□□□ 0.51
SSH1-206ENST00000547381 PHF23Q9BUL5 403 aaPredicted RBP18.22■□□□□ 0.51
SSH1-206ENST00000547381 PHLPP1O60346 1717 aa18.2■□□□□ 0.5
SSH1-206ENST00000547381 ROBO2Q9HCK4 1378 aa18.2■□□□□ 0.5
SSH1-206ENST00000547381 PIK3C2GO75747 1445 aa18.2■□□□□ 0.5
SSH1-206ENST00000547381 BRINP3Q76B58 766 aa18.19■□□□□ 0.5
SSH1-206ENST00000547381 MST1RQ04912 1400 aa18.18■□□□□ 0.5
SSH1-206ENST00000547381 NALCNQ8IZF0 1738 aa18.18■□□□□ 0.5
SSH1-206ENST00000547381 JCADQ9P266 1359 aa18.17■□□□□ 0.5
SSH1-206ENST00000547381 MYOM2P54296 1465 aa18.17■□□□□ 0.5
SSH1-206ENST00000547381 AHDC1Q5TGY3 1603 aaPredicted RBP18.16■□□□□ 0.5
SSH1-206ENST00000547381 C14orf93Q9H972 538 aaKnown RBP18.16■□□□□ 0.5
SSH1-206ENST00000547381 LRPPRCP42704 1394 aaKnown RBP18.16■□□□□ 0.5
SSH1-206ENST00000547381 NRXN1Q9ULB1 1477 aa18.15■□□□□ 0.5
SSH1-206ENST00000547381 STAC3Q96MF2 364 aa18.15■□□□□ 0.5
SSH1-206ENST00000547381 STK26Q9P289 416 aa18.15■□□□□ 0.5
SSH1-206ENST00000547381 COL16A1Q07092 1604 aaPredicted RBP18.15■□□□□ 0.5
SSH1-206ENST00000547381 ABCC11Q96J66 1382 aa18.15■□□□□ 0.5
SSH1-206ENST00000547381 TECPR2O15040 1411 aa18.15■□□□□ 0.5
SSH1-206ENST00000547381 ASXL1Q8IXJ9 1541 aa18.14■□□□□ 0.49
SSH1-206ENST00000547381 TMEM132EQ6IEE7 984 aa18.14■□□□□ 0.49
SSH1-206ENST00000547381 SOCS7O14512 581 aa18.13■□□□□ 0.49
SSH1-206ENST00000547381 LAMC1P11047 1609 aa18.12■□□□□ 0.49
SSH1-206ENST00000547381 YTHDC2Q9H6S0 1430 aaKnown RBP18.12■□□□□ 0.49
SSH1-206ENST00000547381 C1orf167Q5SNV9 1468 aa18.12■□□□□ 0.49
SSH1-206ENST00000547381 CFAP70Q5T0N1 1121 aa18.11■□□□□ 0.49
SSH1-206ENST00000547381 SIRT1Q96EB6 747 aa18.11■□□□□ 0.49
SSH1-206ENST00000547381 SPATA31A6Q5VVP1 1343 aa18.11■□□□□ 0.49
SSH1-206ENST00000547381 DHX57Q6P158 1386 aaKnown RBP18.11■□□□□ 0.49
SSH1-206ENST00000547381 KNDC1Q76NI1 1749 aa18.1■□□□□ 0.49
SSH1-206ENST00000547381 DCAF11Q8TEB1 546 aa18.1■□□□□ 0.49
SSH1-206ENST00000547381 WAPLQ7Z5K2 1190 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms