RNA–Protein interactions for RNA: ENST00000547369.5

GCN1-203, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-203ENST00000547369 ZFYVE9O95405 1425 aa28.58■■■□□ 2.17
GCN1-203ENST00000547369 TMEM131LA2VDJ0 1609 aa28.58■■■□□ 2.17
GCN1-203ENST00000547369 E9PCH4 1651 aa28.58■■■□□ 2.16
GCN1-203ENST00000547369 ITGAEP38570 1179 aa28.57■■■□□ 2.16
GCN1-203ENST00000547369 PPARGC1BQ86YN6 1023 aaKnown RBP28.57■■■□□ 2.16
GCN1-203ENST00000547369 IQGAP3Q86VI3 1631 aa28.57■■■□□ 2.16
GCN1-203ENST00000547369 RIMS2Q9UQ26 1411 aa28.55■■■□□ 2.16
GCN1-203ENST00000547369 HDGFP51858 240 aaKnown RBP28.54■■■□□ 2.16
GCN1-203ENST00000547369 PROSER2Q86WR7 435 aaPredicted RBP28.54■■■□□ 2.16
GCN1-203ENST00000547369 NWD1Q149M9 1564 aa28.54■■■□□ 2.16
GCN1-203ENST00000547369 PLEKHG1Q9ULL1 1385 aa28.53■■■□□ 2.16
GCN1-203ENST00000547369 NKTRP30414 1462 aaKnown RBP28.53■■■□□ 2.16
GCN1-203ENST00000547369 PPP1R15AO75807 674 aaPredicted RBP28.52■■■□□ 2.16
GCN1-203ENST00000547369 NUP155O75694 1391 aa28.51■■■□□ 2.16
GCN1-203ENST00000547369 CHGAP10645 457 aaKnown RBP28.51■■■□□ 2.15
GCN1-203ENST00000547369 RBM33Q96EV2 1170 aaKnown RBP28.5■■■□□ 2.15
GCN1-203ENST00000547369 FAM135BQ49AJ0 1406 aa28.49■■■□□ 2.15
GCN1-203ENST00000547369 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.47■■■□□ 2.15
GCN1-203ENST00000547369 CHD2O14647 1828 aaKnown RBP28.46■■■□□ 2.15
GCN1-203ENST00000547369 PHF23Q9BUL5 403 aaPredicted RBP28.46■■■□□ 2.15
GCN1-203ENST00000547369 TBX22Q9Y458 520 aa28.43■■■□□ 2.14
GCN1-203ENST00000547369 MSH6P52701 1360 aa28.41■■■□□ 2.14
GCN1-203ENST00000547369 NUTM2DQ5VT03 806 aaPredicted RBP28.41■■■□□ 2.14
GCN1-203ENST00000547369 ROBO1Q9Y6N7 1651 aa28.4■■■□□ 2.14
GCN1-203ENST00000547369 ADAMTS13Q76LX8 1427 aa28.38■■■□□ 2.13
GCN1-203ENST00000547369 DIP2AQ14689 1571 aa28.37■■■□□ 2.13
GCN1-203ENST00000547369 RRBP1Q9P2E9 1410 aaKnown RBP28.36■■■□□ 2.13
GCN1-203ENST00000547369 SPHKAPQ2M3C7 1700 aa28.35■■■□□ 2.13
GCN1-203ENST00000547369 PIK3R4Q99570 1358 aa28.33■■■□□ 2.13
GCN1-203ENST00000547369 SLAIN2Q9P270 581 aa28.32■■■□□ 2.12
GCN1-203ENST00000547369 NCOA3Q9Y6Q9 1424 aa28.32■■■□□ 2.12
GCN1-203ENST00000547369 TRPM2O94759 1503 aa28.28■■■□□ 2.12
GCN1-203ENST00000547369 C14orf37Q86TY3 774 aa28.27■■■□□ 2.12
GCN1-203ENST00000547369 NAIPQ13075 1403 aa28.26■■■□□ 2.12
GCN1-203ENST00000547369 RGS17Q9UGC6 210 aaPredicted RBP28.25■■■□□ 2.11
GCN1-203ENST00000547369 ZNF326Q5BKZ1 582 aaKnown RBP28.24■■■□□ 2.11
GCN1-203ENST00000547369 PHLPP1O60346 1717 aa28.23■■■□□ 2.11
GCN1-203ENST00000547369 AMOTL2Q9Y2J4 779 aa28.23■■■□□ 2.11
GCN1-203ENST00000547369 PTPRUQ92729 1446 aa28.23■■■□□ 2.11
GCN1-203ENST00000547369 NRXN3Q9Y4C0 1643 aa28.22■■■□□ 2.11
GCN1-203ENST00000547369 C19orf44Q9H6X5 657 aa28.22■■■□□ 2.11
GCN1-203ENST00000547369 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.22■■■□□ 2.11
GCN1-203ENST00000547369 SETBP1Q9Y6X0 1596 aa28.21■■■□□ 2.11
GCN1-203ENST00000547369 CLTCL1P53675 1640 aa28.21■■■□□ 2.11
GCN1-203ENST00000547369 CADPS2Q86UW7 1296 aa28.2■■■□□ 2.1
GCN1-203ENST00000547369 ATF3P18847 181 aa28.18■■■□□ 2.1
GCN1-203ENST00000547369 XRN1Q8IZH2 1706 aaKnown RBP28.16■■■□□ 2.1
GCN1-203ENST00000547369 KIF1BO60333 1816 aa28.15■■■□□ 2.1
GCN1-203ENST00000547369 JCADQ9P266 1359 aa28.15■■■□□ 2.1
GCN1-203ENST00000547369 NEXMIFQ5QGS0 1516 aa28.15■■■□□ 2.1
GCN1-203ENST00000547369 HFM1A2PYH4 1435 aa28.15■■■□□ 2.1
GCN1-203ENST00000547369 COL16A1Q07092 1604 aaPredicted RBP28.14■■■□□ 2.1
GCN1-203ENST00000547369 TRIM52Q96A61 297 aa28.14■■■□□ 2.1
GCN1-203ENST00000547369 METP08581 1390 aa28.12■■■□□ 2.09
GCN1-203ENST00000547369 DCCP43146 1447 aa28.09■■■□□ 2.09
GCN1-203ENST00000547369 POTEAQ6S8J7 498 aa28.09■■■□□ 2.09
GCN1-203ENST00000547369 AHDC1Q5TGY3 1603 aaPredicted RBP28.09■■■□□ 2.09
GCN1-203ENST00000547369 SLC4A1APQ9BWU0 796 aaKnown RBP28.06■■■□□ 2.08
GCN1-203ENST00000547369 BRINP3Q76B58 766 aa28.05■■■□□ 2.08
GCN1-203ENST00000547369 SPATA31A6Q5VVP1 1343 aa28.02■■■□□ 2.08
GCN1-203ENST00000547369 VGFO15240 615 aaPredicted RBP28.01■■■□□ 2.07
GCN1-203ENST00000547369 MST1RQ04912 1400 aa28.01■■■□□ 2.07
GCN1-203ENST00000547369 SHPRHQ149N8 1683 aa28■■■□□ 2.07
GCN1-203ENST00000547369 ADGRL3Q9HAR2 1447 aa28■■■□□ 2.07
GCN1-203ENST00000547369 ASXL1Q8IXJ9 1541 aa27.98■■■□□ 2.07
GCN1-203ENST00000547369 RPGRIP1LQ68CZ1 1315 aa27.98■■■□□ 2.07
GCN1-203ENST00000547369 LRP6O75581 1613 aa27.98■■■□□ 2.07
GCN1-203ENST00000547369 SETD1AO15047 1707 aaKnown RBP27.97■■■□□ 2.07
GCN1-203ENST00000547369 NALCNQ8IZF0 1738 aa27.96■■■□□ 2.07
GCN1-203ENST00000547369 PPLO60437 1756 aa27.94■■■□□ 2.06
GCN1-203ENST00000547369 MEX3CQ5U5Q3 659 aaKnown RBP27.94■■■□□ 2.06
GCN1-203ENST00000547369 NHSL1Q5SYE7 1610 aa27.93■■■□□ 2.06
GCN1-203ENST00000547369 FOXD1Q16676 465 aa27.93■■■□□ 2.06
GCN1-203ENST00000547369 PTCH1Q13635 1447 aa27.92■■■□□ 2.06
GCN1-203ENST00000547369 SETD5Q9C0A6 1442 aa27.9■■■□□ 2.06
GCN1-203ENST00000547369 ROBO2Q9HCK4 1378 aa27.88■■■□□ 2.05
GCN1-203ENST00000547369 PRAG1Q86YV5 1406 aa27.87■■■□□ 2.05
GCN1-203ENST00000547369 CCDC144AA2RUR9 1427 aa27.86■■■□□ 2.05
GCN1-203ENST00000547369 ZNF772Q68DY9 489 aaPredicted RBP27.86■■■□□ 2.05
GCN1-203ENST00000547369 LRRC59Q96AG4 307 aaKnown RBP27.86■■■□□ 2.05
GCN1-203ENST00000547369 C1orf167Q5SNV9 1468 aa27.85■■■□□ 2.05
GCN1-203ENST00000547369 NUTM2BA6NNL0 878 aaPredicted RBP27.85■■■□□ 2.05
GCN1-203ENST00000547369 NUTM2EB1AL46 878 aaPredicted RBP27.85■■■□□ 2.05
GCN1-203ENST00000547369 NUTM2AQ8IVF1 878 aaPredicted RBP27.85■■■□□ 2.05
GCN1-203ENST00000547369 MPHOSPH9Q99550 1183 aa27.85■■■□□ 2.05
GCN1-203ENST00000547369 DDX17Q92841 729 aaKnown RBP27.84■■■□□ 2.05
GCN1-203ENST00000547369 RGL3Q3MIN7 710 aa27.8■■■□□ 2.04
GCN1-203ENST00000547369 ADGRF5Q8IZF2 1346 aa27.8■■■□□ 2.04
GCN1-203ENST00000547369 SPATA31E1Q6ZUB1 1445 aa27.8■■■□□ 2.04
GCN1-203ENST00000547369 PNPLA6Q8IY17 1366 aa27.78■■■□□ 2.04
GCN1-203ENST00000547369 ANKRD30BQ9BXX2 1392 aa27.77■■■□□ 2.04
GCN1-203ENST00000547369 IFT172Q9UG01 1749 aa27.77■■■□□ 2.04
GCN1-203ENST00000547369 LAMC1P11047 1609 aa27.77■■■□□ 2.04
GCN1-203ENST00000547369 ORAI2Q96SN7 254 aa27.76■■■□□ 2.03
GCN1-203ENST00000547369 AFF2P51816 1311 aa27.73■■■□□ 2.03
GCN1-203ENST00000547369 ACIN1Q9UKV3 1341 aaKnown RBP27.73■■■□□ 2.03
GCN1-203ENST00000547369 SOS2Q07890 1332 aaPredicted RBP27.71■■■□□ 2.03
GCN1-203ENST00000547369 RXRBP28702 533 aa27.71■■■□□ 2.03
GCN1-203ENST00000547369 CDC42BPGQ6DT37 1551 aa27.7■■■□□ 2.03
GCN1-203ENST00000547369 STK26Q9P289 416 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms