RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 UHRF1BP1Q6BDS2 1440 aa22.63■■□□□ 1.21
TRAFD1-203ENST00000547063 PPLO60437 1756 aa22.63■■□□□ 1.21
TRAFD1-203ENST00000547063 CEP170BQ9Y4F5 1589 aaPredicted RBP22.63■■□□□ 1.21
TRAFD1-203ENST00000547063 ZNF142P52746 1687 aaPredicted RBP22.62■■□□□ 1.21
TRAFD1-203ENST00000547063 VGFO15240 615 aaPredicted RBP22.62■■□□□ 1.21
TRAFD1-203ENST00000547063 THEMISQ8N1K5 641 aaPredicted RBP22.62■■□□□ 1.21
TRAFD1-203ENST00000547063 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.6■■□□□ 1.21
TRAFD1-203ENST00000547063 NEXMIFQ5QGS0 1516 aa22.6■■□□□ 1.21
TRAFD1-203ENST00000547063 ZFYVE9O95405 1425 aa22.59■■□□□ 1.21
TRAFD1-203ENST00000547063 PRAG1Q86YV5 1406 aa22.57■■□□□ 1.2
TRAFD1-203ENST00000547063 RIMS2Q9UQ26 1411 aa22.57■■□□□ 1.2
TRAFD1-203ENST00000547063 TMEM2Q9UHN6 1383 aa22.57■■□□□ 1.2
TRAFD1-203ENST00000547063 NRXN1Q9ULB1 1477 aa22.54■■□□□ 1.2
TRAFD1-203ENST00000547063 SLIT1O75093 1534 aa22.54■■□□□ 1.2
TRAFD1-203ENST00000547063 NBPF8Q3BBV2 869 aa22.53■■□□□ 1.2
TRAFD1-203ENST00000547063 EID1Q9Y6B2 187 aa22.53■■□□□ 1.2
TRAFD1-203ENST00000547063 ARHGAP23Q9P227 1491 aa22.53■■□□□ 1.2
TRAFD1-203ENST00000547063 ADGRF5Q8IZF2 1346 aa22.51■■□□□ 1.19
TRAFD1-203ENST00000547063 RALGAPBQ86X10 1494 aa22.5■■□□□ 1.19
TRAFD1-203ENST00000547063 KIAA1210Q9ULL0 1709 aa22.5■■□□□ 1.19
TRAFD1-203ENST00000547063 PIK3C2GO75747 1445 aa22.49■■□□□ 1.19
TRAFD1-203ENST00000547063 TRPM1Q7Z4N2 1603 aa22.49■■□□□ 1.19
TRAFD1-203ENST00000547063 LAMC1P11047 1609 aa22.48■■□□□ 1.19
TRAFD1-203ENST00000547063 NUTM2DQ5VT03 806 aaPredicted RBP22.46■■□□□ 1.19
TRAFD1-203ENST00000547063 TXNDC2Q86VQ3 553 aa22.46■■□□□ 1.19
TRAFD1-203ENST00000547063 ROCK2O75116 1388 aaKnown RBP22.45■■□□□ 1.18
TRAFD1-203ENST00000547063 ANKLE2Q86XL3 938 aa22.44■■□□□ 1.18
TRAFD1-203ENST00000547063 SCAF11Q99590 1463 aaKnown RBP22.44■■□□□ 1.18
TRAFD1-203ENST00000547063 PLEKHG1Q9ULL1 1385 aa22.43■■□□□ 1.18
TRAFD1-203ENST00000547063 C14orf93Q9H972 538 aaKnown RBP22.43■■□□□ 1.18
TRAFD1-203ENST00000547063 GPRASP1Q5JY77 1395 aa22.42■■□□□ 1.18
TRAFD1-203ENST00000547063 SETBP1Q9Y6X0 1596 aa22.42■■□□□ 1.18
TRAFD1-203ENST00000547063 LTKP29376 864 aa22.41■■□□□ 1.18
TRAFD1-203ENST00000547063 CFAP70Q5T0N1 1121 aa22.4■■□□□ 1.18
TRAFD1-203ENST00000547063 CARD11Q9BXL7 1154 aa22.4■■□□□ 1.18
TRAFD1-203ENST00000547063 BCANQ96GW7 911 aa22.39■■□□□ 1.17
TRAFD1-203ENST00000547063 LMTK3Q96Q04 1460 aa22.37■■□□□ 1.17
TRAFD1-203ENST00000547063 NBPF1Q3BBV0 1214 aa22.37■■□□□ 1.17
TRAFD1-203ENST00000547063 ALKQ9UM73 1620 aa22.37■■□□□ 1.17
TRAFD1-203ENST00000547063 POLR1AO95602 1720 aaPredicted RBP22.37■■□□□ 1.17
TRAFD1-203ENST00000547063 EIF4G2P78344 907 aaKnown RBP eCLIP22.36■■□□□ 1.17
TRAFD1-203ENST00000547063 DIP2AQ14689 1571 aa22.35■■□□□ 1.17
TRAFD1-203ENST00000547063 NRXN3Q9Y4C0 1643 aa22.35■■□□□ 1.17
TRAFD1-203ENST00000547063 IQGAP1P46940 1657 aa22.34■■□□□ 1.17
TRAFD1-203ENST00000547063 MED14O60244 1454 aa22.33■■□□□ 1.16
TRAFD1-203ENST00000547063 USP47Q96K76 1375 aa22.32■■□□□ 1.16
TRAFD1-203ENST00000547063 ADGRB1O14514 1584 aa22.32■■□□□ 1.16
TRAFD1-203ENST00000547063 EIF3AQ14152 1382 aaKnown RBP22.31■■□□□ 1.16
TRAFD1-203ENST00000547063 TBX22Q9Y458 520 aa22.31■■□□□ 1.16
TRAFD1-203ENST00000547063 ADAMTS13Q76LX8 1427 aa22.31■■□□□ 1.16
TRAFD1-203ENST00000547063 SETD1AO15047 1707 aaKnown RBP22.3■■□□□ 1.16
TRAFD1-203ENST00000547063 NPHP4O75161 1426 aaPredicted RBP22.3■■□□□ 1.16
TRAFD1-203ENST00000547063 TMEM132EQ6IEE7 984 aa22.27■■□□□ 1.16
TRAFD1-203ENST00000547063 SENP3Q9H4L4 574 aaPredicted RBP22.27■■□□□ 1.16
TRAFD1-203ENST00000547063 PIK3R4Q99570 1358 aa22.26■■□□□ 1.15
TRAFD1-203ENST00000547063 HSPA5P11021 654 aaKnown RBP22.26■■□□□ 1.15
TRAFD1-203ENST00000547063 HSPA2P54652 639 aa22.26■■□□□ 1.15
TRAFD1-203ENST00000547063 NCKAP5LQ9HCH0 1330 aa22.26■■□□□ 1.15
TRAFD1-203ENST00000547063 ASXL1Q8IXJ9 1541 aa22.26■■□□□ 1.15
TRAFD1-203ENST00000547063 YTHDC2Q9H6S0 1430 aaKnown RBP22.25■■□□□ 1.15
TRAFD1-203ENST00000547063 LRPPRCP42704 1394 aaKnown RBP22.25■■□□□ 1.15
TRAFD1-203ENST00000547063 SLC24A1O60721 1099 aa22.24■■□□□ 1.15
TRAFD1-203ENST00000547063 SLC26A8Q96RN1 970 aa22.24■■□□□ 1.15
TRAFD1-203ENST00000547063 ZNF316A6NFI3 1004 aaPredicted RBP22.23■■□□□ 1.15
TRAFD1-203ENST00000547063 METP08581 1390 aa22.23■■□□□ 1.15
TRAFD1-203ENST00000547063 ABCC11Q96J66 1382 aa22.23■■□□□ 1.15
TRAFD1-203ENST00000547063 DLC1Q96QB1 1528 aa22.21■■□□□ 1.15
TRAFD1-203ENST00000547063 ST20-MTHFSA0A0A6YYL1 179 aa22.2■■□□□ 1.14
TRAFD1-203ENST00000547063 TRAK1Q9UPV9 953 aa22.2■■□□□ 1.14
TRAFD1-203ENST00000547063 KNDC1Q76NI1 1749 aa22.2■■□□□ 1.14
TRAFD1-203ENST00000547063 STK26Q9P289 416 aa22.19■■□□□ 1.14
TRAFD1-203ENST00000547063 TECPR2O15040 1411 aa22.19■■□□□ 1.14
TRAFD1-203ENST00000547063 STRCQ7RTU9 1775 aa22.18■■□□□ 1.14
TRAFD1-203ENST00000547063 ARHGEF28Q8N1W1 1705 aaKnown RBP22.18■■□□□ 1.14
TRAFD1-203ENST00000547063 SIRT1Q96EB6 747 aa22.18■■□□□ 1.14
TRAFD1-203ENST00000547063 DMRT2Q9Y5R5 561 aa22.18■■□□□ 1.14
TRAFD1-203ENST00000547063 CENPJQ9HC77 1338 aaPredicted RBP22.17■■□□□ 1.14
TRAFD1-203ENST00000547063 CPS1P31327 1500 aa22.16■■□□□ 1.14
TRAFD1-203ENST00000547063 FAM135BQ49AJ0 1406 aa22.14■■□□□ 1.14
TRAFD1-203ENST00000547063 SBNO2Q9Y2G9 1366 aa22.14■■□□□ 1.14
TRAFD1-203ENST00000547063 HIRIP3Q9BW71 556 aaPredicted RBP22.14■■□□□ 1.13
TRAFD1-203ENST00000547063 POGKQ9P215 609 aa22.14■■□□□ 1.13
TRAFD1-203ENST00000547063 AMOTL2Q9Y2J4 779 aa22.14■■□□□ 1.13
TRAFD1-203ENST00000547063 CHD2O14647 1828 aaKnown RBP22.14■■□□□ 1.13
TRAFD1-203ENST00000547063 XRN1Q8IZH2 1706 aaKnown RBP22.12■■□□□ 1.13
TRAFD1-203ENST00000547063 PTCH1Q13635 1447 aa22.12■■□□□ 1.13
TRAFD1-203ENST00000547063 PTPRUQ92729 1446 aa22.12■■□□□ 1.13
TRAFD1-203ENST00000547063 QRICH2Q9H0J4 1663 aa22.11■■□□□ 1.13
TRAFD1-203ENST00000547063 PRAM1Q96QH2 718 aa22.11■■□□□ 1.13
TRAFD1-203ENST00000547063 KCNA6P17658 529 aa22.1■■□□□ 1.13
TRAFD1-203ENST00000547063 TMF1P82094 1093 aa22.1■■□□□ 1.13
TRAFD1-203ENST00000547063 TESK2Q96S53 571 aa22.1■■□□□ 1.13
TRAFD1-203ENST00000547063 CDCA8Q53HL2 280 aa22.09■■□□□ 1.13
TRAFD1-203ENST00000547063 NWD1Q149M9 1564 aa22.08■■□□□ 1.13
TRAFD1-203ENST00000547063 ROBO2Q9HCK4 1378 aa22.06■■□□□ 1.12
TRAFD1-203ENST00000547063 NKTRP30414 1462 aaKnown RBP22.05■■□□□ 1.12
TRAFD1-203ENST00000547063 EVC2Q86UK5 1308 aa22.04■■□□□ 1.12
TRAFD1-203ENST00000547063 WAPLQ7Z5K2 1190 aa22.03■■□□□ 1.12
TRAFD1-203ENST00000547063 SAFB2Q14151 953 aaKnown RBP eCLIP22.02■■□□□ 1.12
TRAFD1-203ENST00000547063 CCDC7Q96M83 1385 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms