RNA–Protein interactions for RNA: ENST00000546860.2

CR383656.9-201, humanhuman

BASIC

Gene CR383656.9, Length 1,178 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR383656.9-201ENST00000546860 FOXD1Q16676 465 aa17.42■□□□□ 0.38
CR383656.9-201ENST00000546860 SLC4A1APQ9BWU0 796 aaKnown RBP17.42■□□□□ 0.38
CR383656.9-201ENST00000546860 NWD1Q149M9 1564 aa17.41■□□□□ 0.38
CR383656.9-201ENST00000546860 CPS1P31327 1500 aa17.41■□□□□ 0.38
CR383656.9-201ENST00000546860 TXNDC2Q86VQ3 553 aa17.4■□□□□ 0.38
CR383656.9-201ENST00000546860 CERKQ8TCT0 537 aa17.4■□□□□ 0.38
CR383656.9-201ENST00000546860 SENP3Q9H4L4 574 aaPredicted RBP17.4■□□□□ 0.38
CR383656.9-201ENST00000546860 CHD2O14647 1828 aaKnown RBP17.4■□□□□ 0.38
CR383656.9-201ENST00000546860 IQSEC2Q5JU85 1478 aa17.39■□□□□ 0.37
CR383656.9-201ENST00000546860 SETD1AO15047 1707 aaKnown RBP17.39■□□□□ 0.37
CR383656.9-201ENST00000546860 CHGAP10645 457 aaKnown RBP17.39■□□□□ 0.37
CR383656.9-201ENST00000546860 DIP2AQ14689 1571 aa17.38■□□□□ 0.37
CR383656.9-201ENST00000546860 EID1Q9Y6B2 187 aa17.37■□□□□ 0.37
CR383656.9-201ENST00000546860 PLEKHG1Q9ULL1 1385 aa17.37■□□□□ 0.37
CR383656.9-201ENST00000546860 SETBP1Q9Y6X0 1596 aa17.36■□□□□ 0.37
CR383656.9-201ENST00000546860 MPHOSPH9Q99550 1183 aa17.36■□□□□ 0.37
CR383656.9-201ENST00000546860 ILDR1Q86SU0 546 aaPredicted RBP17.35■□□□□ 0.37
CR383656.9-201ENST00000546860 ADAMTS13Q76LX8 1427 aa17.35■□□□□ 0.37
CR383656.9-201ENST00000546860 NUTM2DQ5VT03 806 aaPredicted RBP17.34■□□□□ 0.37
CR383656.9-201ENST00000546860 LRRC7Q96NW7 1537 aa17.34■□□□□ 0.37
CR383656.9-201ENST00000546860 ALKQ9UM73 1620 aa17.34■□□□□ 0.37
CR383656.9-201ENST00000546860 CCDC144AA2RUR9 1427 aa17.32■□□□□ 0.36
CR383656.9-201ENST00000546860 XRN1Q8IZH2 1706 aaKnown RBP17.32■□□□□ 0.36
CR383656.9-201ENST00000546860 SPATA31E1Q6ZUB1 1445 aa17.31■□□□□ 0.36
CR383656.9-201ENST00000546860 FBXO41Q8TF61 875 aa17.31■□□□□ 0.36
CR383656.9-201ENST00000546860 SLC26A8Q96RN1 970 aa17.3■□□□□ 0.36
CR383656.9-201ENST00000546860 PPP1R15AO75807 674 aaPredicted RBP17.29■□□□□ 0.36
CR383656.9-201ENST00000546860 NKTRP30414 1462 aaKnown RBP17.29■□□□□ 0.36
CR383656.9-201ENST00000546860 ZNF326Q5BKZ1 582 aaKnown RBP17.27■□□□□ 0.36
CR383656.9-201ENST00000546860 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.26■□□□□ 0.35
CR383656.9-201ENST00000546860 ACIN1Q9UKV3 1341 aaKnown RBP17.25■□□□□ 0.35
CR383656.9-201ENST00000546860 PTPRUQ92729 1446 aa17.25■□□□□ 0.35
CR383656.9-201ENST00000546860 ANKRD30BQ9BXX2 1392 aa17.25■□□□□ 0.35
CR383656.9-201ENST00000546860 ASXL1Q8IXJ9 1541 aa17.23■□□□□ 0.35
CR383656.9-201ENST00000546860 HRCP23327 699 aa17.23■□□□□ 0.35
CR383656.9-201ENST00000546860 BCANQ96GW7 911 aa17.22■□□□□ 0.35
CR383656.9-201ENST00000546860 NALCNQ8IZF0 1738 aa17.21■□□□□ 0.35
CR383656.9-201ENST00000546860 HDGFP51858 240 aaKnown RBP17.2■□□□□ 0.34
CR383656.9-201ENST00000546860 MYOM2P54296 1465 aa17.19■□□□□ 0.34
CR383656.9-201ENST00000546860 KNDC1Q76NI1 1749 aa17.19■□□□□ 0.34
CR383656.9-201ENST00000546860 METP08581 1390 aa17.19■□□□□ 0.34
CR383656.9-201ENST00000546860 KCNA6P17658 529 aa17.19■□□□□ 0.34
CR383656.9-201ENST00000546860 TBX22Q9Y458 520 aa17.19■□□□□ 0.34
CR383656.9-201ENST00000546860 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.18■□□□□ 0.34
CR383656.9-201ENST00000546860 LAMC1P11047 1609 aa17.18■□□□□ 0.34
CR383656.9-201ENST00000546860 TMEM94Q12767 1356 aa17.18■□□□□ 0.34
CR383656.9-201ENST00000546860 PIK3R4Q99570 1358 aa17.18■□□□□ 0.34
CR383656.9-201ENST00000546860 NRXN1Q9ULB1 1477 aa17.18■□□□□ 0.34
CR383656.9-201ENST00000546860 PIK3C2GO75747 1445 aa17.17■□□□□ 0.34
CR383656.9-201ENST00000546860 RPGRIP1LQ68CZ1 1315 aa17.17■□□□□ 0.34
CR383656.9-201ENST00000546860 RGL3Q3MIN7 710 aa17.16■□□□□ 0.34
CR383656.9-201ENST00000546860 RBM33Q96EV2 1170 aaKnown RBP17.16■□□□□ 0.34
CR383656.9-201ENST00000546860 ADGRF5Q8IZF2 1346 aa17.16■□□□□ 0.34
CR383656.9-201ENST00000546860 UBAP1LF5GYI3 381 aa17.15■□□□□ 0.34
CR383656.9-201ENST00000546860 ROBO1Q9Y6N7 1651 aa17.13■□□□□ 0.33
CR383656.9-201ENST00000546860 TRIM26Q12899 539 aaPredicted RBP17.13■□□□□ 0.33
CR383656.9-201ENST00000546860 PRAG1Q86YV5 1406 aa17.12■□□□□ 0.33
CR383656.9-201ENST00000546860 VGFO15240 615 aaPredicted RBP17.11■□□□□ 0.33
CR383656.9-201ENST00000546860 PTCH1Q13635 1447 aa17.11■□□□□ 0.33
CR383656.9-201ENST00000546860 PROSER2Q86WR7 435 aaPredicted RBP17.1■□□□□ 0.33
CR383656.9-201ENST00000546860 DHX57Q6P158 1386 aaKnown RBP17.1■□□□□ 0.33
CR383656.9-201ENST00000546860 AMOTL2Q9Y2J4 779 aa17.09■□□□□ 0.33
CR383656.9-201ENST00000546860 ADGRB1O14514 1584 aa17.07■□□□□ 0.32
CR383656.9-201ENST00000546860 PIP4K2BP78356 416 aa17.07■□□□□ 0.32
CR383656.9-201ENST00000546860 NCOA3Q9Y6Q9 1424 aa17.06■□□□□ 0.32
CR383656.9-201ENST00000546860 MSH6P52701 1360 aa17.06■□□□□ 0.32
CR383656.9-201ENST00000546860 ROBO2Q9HCK4 1378 aa17.06■□□□□ 0.32
CR383656.9-201ENST00000546860 ADGRL3Q9HAR2 1447 aa17.05■□□□□ 0.32
CR383656.9-201ENST00000546860 SCAF1Q9H7N4 1312 aaKnown RBP17.05■□□□□ 0.32
CR383656.9-201ENST00000546860 TOM1O60784 492 aa17.05■□□□□ 0.32
CR383656.9-201ENST00000546860 TECPR2O15040 1411 aa17.04■□□□□ 0.32
CR383656.9-201ENST00000546860 ARHGEF28Q8N1W1 1705 aaKnown RBP17.04■□□□□ 0.32
CR383656.9-201ENST00000546860 KIAA1210Q9ULL0 1709 aa17.04■□□□□ 0.32
CR383656.9-201ENST00000546860 PHLPP1O60346 1717 aa17.02■□□□□ 0.32
CR383656.9-201ENST00000546860 DCCP43146 1447 aa17.02■□□□□ 0.31
CR383656.9-201ENST00000546860 YTHDC2Q9H6S0 1430 aaKnown RBP17.02■□□□□ 0.31
CR383656.9-201ENST00000546860 CDC42BPGQ6DT37 1551 aa17.02■□□□□ 0.31
CR383656.9-201ENST00000546860 LRPPRCP42704 1394 aaKnown RBP17.01■□□□□ 0.31
CR383656.9-201ENST00000546860 NHSL1Q5SYE7 1610 aa17■□□□□ 0.31
CR383656.9-201ENST00000546860 FMN2Q9NZ56 1722 aa17■□□□□ 0.31
CR383656.9-201ENST00000546860 COL16A1Q07092 1604 aaPredicted RBP16.99■□□□□ 0.31
CR383656.9-201ENST00000546860 TRPM1Q7Z4N2 1603 aa16.99■□□□□ 0.31
CR383656.9-201ENST00000546860 MST1RQ04912 1400 aa16.99■□□□□ 0.31
CR383656.9-201ENST00000546860 CFAP70Q5T0N1 1121 aa16.99■□□□□ 0.31
CR383656.9-201ENST00000546860 TMEM132EQ6IEE7 984 aa16.99■□□□□ 0.31
CR383656.9-201ENST00000546860 DCAF11Q8TEB1 546 aa16.99■□□□□ 0.31
CR383656.9-201ENST00000546860 FAM135BQ49AJ0 1406 aa16.98■□□□□ 0.31
CR383656.9-201ENST00000546860 DLC1Q96QB1 1528 aa16.98■□□□□ 0.31
CR383656.9-201ENST00000546860 HSPA1LP34931 641 aa16.98■□□□□ 0.31
CR383656.9-201ENST00000546860 KDM2AQ9Y2K7 1162 aa16.98■□□□□ 0.31
CR383656.9-201ENST00000546860 PLEKHH1Q9ULM0 1364 aa16.98■□□□□ 0.31
CR383656.9-201ENST00000546860 AHDC1Q5TGY3 1603 aaPredicted RBP16.97■□□□□ 0.31
CR383656.9-201ENST00000546860 C14orf37Q86TY3 774 aa16.97■□□□□ 0.31
CR383656.9-201ENST00000546860 SIN3AQ96ST3 1273 aa16.97■□□□□ 0.31
CR383656.9-201ENST00000546860 C14orf93Q9H972 538 aaKnown RBP16.97■□□□□ 0.31
CR383656.9-201ENST00000546860 RGPD8O14715 1765 aaPredicted RBP16.97■□□□□ 0.31
CR383656.9-201ENST00000546860 ADGRB2O60241 1585 aa16.95■□□□□ 0.3
CR383656.9-201ENST00000546860 ABCC11Q96J66 1382 aa16.95■□□□□ 0.3
CR383656.9-201ENST00000546860 MED1Q15648 1581 aaPredicted RBP16.94■□□□□ 0.3
CR383656.9-201ENST00000546860 C19orf44Q9H6X5 657 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms