RNA–Protein interactions for RNA: ENST00000546622.1

MSI1-202, Transcript of musashi RNA binding protein 1, humanhuman

TSL 3

Gene MSI1, Length 422 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1-202ENST00000546622 NKTRP30414 1462 aaKnown RBP20.57■□□□□ 0.88
MSI1-202ENST00000546622 MSH6P52701 1360 aa20.57■□□□□ 0.88
MSI1-202ENST00000546622 RPRD2Q5VT52 1461 aaKnown RBP20.56■□□□□ 0.88
MSI1-202ENST00000546622 PPP1R15AO75807 674 aaPredicted RBP20.56■□□□□ 0.88
MSI1-202ENST00000546622 HDGFP51858 240 aaKnown RBP20.56■□□□□ 0.88
MSI1-202ENST00000546622 NWD1Q149M9 1564 aa20.55■□□□□ 0.88
MSI1-202ENST00000546622 GCC2Q8IWJ2 1684 aa20.55■□□□□ 0.88
MSI1-202ENST00000546622 ANKRD50Q9ULJ7 1429 aa20.55■□□□□ 0.88
MSI1-202ENST00000546622 RGS17Q9UGC6 210 aaPredicted RBP20.55■□□□□ 0.88
MSI1-202ENST00000546622 CHD2O14647 1828 aaKnown RBP20.53■□□□□ 0.88
MSI1-202ENST00000546622 PHLPP1O60346 1717 aa20.51■□□□□ 0.87
MSI1-202ENST00000546622 PLEKHG1Q9ULL1 1385 aa20.5■□□□□ 0.87
MSI1-202ENST00000546622 CHGAP10645 457 aaKnown RBP20.5■□□□□ 0.87
MSI1-202ENST00000546622 SLAIN2Q9P270 581 aa20.5■□□□□ 0.87
MSI1-202ENST00000546622 RIMS2Q9UQ26 1411 aa20.5■□□□□ 0.87
MSI1-202ENST00000546622 ZFYVE9O95405 1425 aa20.49■□□□□ 0.87
MSI1-202ENST00000546622 TMEM131LA2VDJ0 1609 aa20.48■□□□□ 0.87
MSI1-202ENST00000546622 C14orf37Q86TY3 774 aa20.47■□□□□ 0.87
MSI1-202ENST00000546622 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.47■□□□□ 0.87
MSI1-202ENST00000546622 UNC13BO14795 1591 aa20.46■□□□□ 0.87
MSI1-202ENST00000546622 POTEAQ6S8J7 498 aa20.45■□□□□ 0.86
MSI1-202ENST00000546622 JCADQ9P266 1359 aa20.44■□□□□ 0.86
MSI1-202ENST00000546622 E9PCH4 1651 aa20.43■□□□□ 0.86
MSI1-202ENST00000546622 TBX22Q9Y458 520 aa20.43■□□□□ 0.86
MSI1-202ENST00000546622 NUTM2DQ5VT03 806 aaPredicted RBP20.41■□□□□ 0.86
MSI1-202ENST00000546622 NCOA3Q9Y6Q9 1424 aa20.4■□□□□ 0.86
MSI1-202ENST00000546622 DIP2AQ14689 1571 aa20.39■□□□□ 0.85
MSI1-202ENST00000546622 IQGAP3Q86VI3 1631 aa20.38■□□□□ 0.85
MSI1-202ENST00000546622 ATF3P18847 181 aa20.38■□□□□ 0.85
MSI1-202ENST00000546622 CADPS2Q86UW7 1296 aa20.38■□□□□ 0.85
MSI1-202ENST00000546622 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.38■□□□□ 0.85
MSI1-202ENST00000546622 COL16A1Q07092 1604 aaPredicted RBP20.38■□□□□ 0.85
MSI1-202ENST00000546622 ROCK1Q13464 1354 aa20.36■□□□□ 0.85
MSI1-202ENST00000546622 PIK3R4Q99570 1358 aa20.36■□□□□ 0.85
MSI1-202ENST00000546622 MEX3CQ5U5Q3 659 aaKnown RBP20.36■□□□□ 0.85
MSI1-202ENST00000546622 C19orf44Q9H6X5 657 aa20.36■□□□□ 0.85
MSI1-202ENST00000546622 ADAMTS13Q76LX8 1427 aa20.36■□□□□ 0.85
MSI1-202ENST00000546622 TRPM2O94759 1503 aa20.35■□□□□ 0.85
MSI1-202ENST00000546622 SETD1AO15047 1707 aaKnown RBP20.35■□□□□ 0.85
MSI1-202ENST00000546622 NUP155O75694 1391 aa20.34■□□□□ 0.85
MSI1-202ENST00000546622 SPATA31A6Q5VVP1 1343 aa20.34■□□□□ 0.85
MSI1-202ENST00000546622 ITGAEP38570 1179 aa20.33■□□□□ 0.85
MSI1-202ENST00000546622 AMOTL2Q9Y2J4 779 aa20.31■□□□□ 0.84
MSI1-202ENST00000546622 AHDC1Q5TGY3 1603 aaPredicted RBP20.31■□□□□ 0.84
MSI1-202ENST00000546622 SHPRHQ149N8 1683 aa20.3■□□□□ 0.84
MSI1-202ENST00000546622 ZNF772Q68DY9 489 aaPredicted RBP20.29■□□□□ 0.84
MSI1-202ENST00000546622 SPHKAPQ2M3C7 1700 aa20.29■□□□□ 0.84
MSI1-202ENST00000546622 ZNF326Q5BKZ1 582 aaKnown RBP20.28■□□□□ 0.84
MSI1-202ENST00000546622 LRP6O75581 1613 aa20.27■□□□□ 0.84
MSI1-202ENST00000546622 PTPRUQ92729 1446 aa20.25■□□□□ 0.83
MSI1-202ENST00000546622 BRINP3Q76B58 766 aa20.24■□□□□ 0.83
MSI1-202ENST00000546622 DCCP43146 1447 aa20.24■□□□□ 0.83
MSI1-202ENST00000546622 NUTM2BA6NNL0 878 aaPredicted RBP20.23■□□□□ 0.83
MSI1-202ENST00000546622 NUTM2EB1AL46 878 aaPredicted RBP20.23■□□□□ 0.83
MSI1-202ENST00000546622 NUTM2AQ8IVF1 878 aaPredicted RBP20.23■□□□□ 0.83
MSI1-202ENST00000546622 TRIM52Q96A61 297 aa20.23■□□□□ 0.83
MSI1-202ENST00000546622 XRN1Q8IZH2 1706 aaKnown RBP20.22■□□□□ 0.83
MSI1-202ENST00000546622 SETBP1Q9Y6X0 1596 aa20.22■□□□□ 0.83
MSI1-202ENST00000546622 NRXN3Q9Y4C0 1643 aa20.22■□□□□ 0.83
MSI1-202ENST00000546622 ASXL1Q8IXJ9 1541 aa20.2■□□□□ 0.82
MSI1-202ENST00000546622 KIF1BO60333 1816 aa20.18■□□□□ 0.82
MSI1-202ENST00000546622 RXRBP28702 533 aa20.18■□□□□ 0.82
MSI1-202ENST00000546622 PPARGC1BQ86YN6 1023 aaKnown RBP20.18■□□□□ 0.82
MSI1-202ENST00000546622 NHSL1Q5SYE7 1610 aa20.17■□□□□ 0.82
MSI1-202ENST00000546622 MST1RQ04912 1400 aa20.17■□□□□ 0.82
MSI1-202ENST00000546622 LRRC59Q96AG4 307 aaKnown RBP20.16■□□□□ 0.82
MSI1-202ENST00000546622 METP08581 1390 aa20.16■□□□□ 0.82
MSI1-202ENST00000546622 UPF1Q92900 1129 aaKnown RBP eCLIP20.15■□□□□ 0.82
MSI1-202ENST00000546622 SETD5Q9C0A6 1442 aa20.15■□□□□ 0.82
MSI1-202ENST00000546622 CLTCL1P53675 1640 aa20.14■□□□□ 0.81
MSI1-202ENST00000546622 AFF2P51816 1311 aa20.14■□□□□ 0.81
MSI1-202ENST00000546622 ADGRL3Q9HAR2 1447 aa20.13■□□□□ 0.81
MSI1-202ENST00000546622 NALCNQ8IZF0 1738 aa20.13■□□□□ 0.81
MSI1-202ENST00000546622 NEXMIFQ5QGS0 1516 aa20.12■□□□□ 0.81
MSI1-202ENST00000546622 C8orf37Q96NL8 207 aa20.1■□□□□ 0.81
MSI1-202ENST00000546622 CDK12Q9NYV4 1490 aaPredicted RBP20.1■□□□□ 0.81
MSI1-202ENST00000546622 DDX17Q92841 729 aaKnown RBP20.09■□□□□ 0.81
MSI1-202ENST00000546622 VGFO15240 615 aaPredicted RBP20.07■□□□□ 0.8
MSI1-202ENST00000546622 PNPLA6Q8IY17 1366 aa20.07■□□□□ 0.8
MSI1-202ENST00000546622 QTRT2Q9H974 415 aaKnown RBP20.05■□□□□ 0.8
MSI1-202ENST00000546622 C1orf167Q5SNV9 1468 aa20.05■□□□□ 0.8
MSI1-202ENST00000546622 RBM6P78332 1123 aaKnown RBP20.04■□□□□ 0.8
MSI1-202ENST00000546622 PTCH1Q13635 1447 aa20.03■□□□□ 0.8
MSI1-202ENST00000546622 ADAMTS2O95450 1211 aa20.03■□□□□ 0.8
MSI1-202ENST00000546622 NGLY1Q96IV0 654 aa20.03■□□□□ 0.8
MSI1-202ENST00000546622 NAIPQ13075 1403 aa20.02■□□□□ 0.8
MSI1-202ENST00000546622 RRBP1Q9P2E9 1410 aaKnown RBP20■□□□□ 0.79
MSI1-202ENST00000546622 RPGRIP1LQ68CZ1 1315 aa20■□□□□ 0.79
MSI1-202ENST00000546622 LAMC1P11047 1609 aa19.99■□□□□ 0.79
MSI1-202ENST00000546622 ROBO2Q9HCK4 1378 aa19.99■□□□□ 0.79
MSI1-202ENST00000546622 PPLO60437 1756 aa19.99■□□□□ 0.79
MSI1-202ENST00000546622 ORAI2Q96SN7 254 aa19.99■□□□□ 0.79
MSI1-202ENST00000546622 SLC4A1APQ9BWU0 796 aaKnown RBP19.99■□□□□ 0.79
MSI1-202ENST00000546622 RGS12O14924 1447 aa19.99■□□□□ 0.79
MSI1-202ENST00000546622 HFM1A2PYH4 1435 aa19.97■□□□□ 0.79
MSI1-202ENST00000546622 SOS2Q07890 1332 aaPredicted RBP19.97■□□□□ 0.79
MSI1-202ENST00000546622 USP21Q9UK80 565 aa19.95■□□□□ 0.78
MSI1-202ENST00000546622 TRPC5Q9UL62 973 aaPredicted RBP19.94■□□□□ 0.78
MSI1-202ENST00000546622 PRAG1Q86YV5 1406 aa19.93■□□□□ 0.78
MSI1-202ENST00000546622 ESCO1Q5FWF5 840 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms