RNA–Protein interactions for RNA: ENST00000545698.1

TDG-210, Transcript of thymine DNA glycosylase, humanhuman

TSL 1 (best)

Gene TDG, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDG-210ENST00000545698 RBM33Q96EV2 1170 aaKnown RBP29.39■■■□□ 2.3
TDG-210ENST00000545698 GCC2Q8IWJ2 1684 aa29.37■■■□□ 2.29
TDG-210ENST00000545698 NKTRP30414 1462 aaKnown RBP29.36■■■□□ 2.29
TDG-210ENST00000545698 NWD1Q149M9 1564 aa29.36■■■□□ 2.29
TDG-210ENST00000545698 ROBO1Q9Y6N7 1651 aa29.36■■■□□ 2.29
TDG-210ENST00000545698 PPP1R15AO75807 674 aaPredicted RBP29.34■■■□□ 2.29
TDG-210ENST00000545698 MSH6P52701 1360 aa29.31■■■□□ 2.28
TDG-210ENST00000545698 HDGFP51858 240 aaKnown RBP29.31■■■□□ 2.28
TDG-210ENST00000545698 ZFYVE9O95405 1425 aa29.3■■■□□ 2.28
TDG-210ENST00000545698 RIMS2Q9UQ26 1411 aa29.3■■■□□ 2.28
TDG-210ENST00000545698 PLEKHG1Q9ULL1 1385 aa29.3■■■□□ 2.28
TDG-210ENST00000545698 UNC13BO14795 1591 aa29.3■■■□□ 2.28
TDG-210ENST00000545698 TMEM131LA2VDJ0 1609 aa29.29■■■□□ 2.28
TDG-210ENST00000545698 CHD2O14647 1828 aaKnown RBP29.29■■■□□ 2.28
TDG-210ENST00000545698 CHGAP10645 457 aaKnown RBP29.28■■■□□ 2.28
TDG-210ENST00000545698 RGS17Q9UGC6 210 aaPredicted RBP29.28■■■□□ 2.28
TDG-210ENST00000545698 E9PCH4 1651 aa29.25■■■□□ 2.27
TDG-210ENST00000545698 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.22■■■□□ 2.27
TDG-210ENST00000545698 SLAIN2Q9P270 581 aa29.22■■■□□ 2.27
TDG-210ENST00000545698 PHLPP1O60346 1717 aa29.21■■■□□ 2.27
TDG-210ENST00000545698 ROCK1Q13464 1354 aa29.19■■■□□ 2.26
TDG-210ENST00000545698 TBX22Q9Y458 520 aa29.19■■■□□ 2.26
TDG-210ENST00000545698 IQGAP3Q86VI3 1631 aa29.19■■■□□ 2.26
TDG-210ENST00000545698 NUTM2DQ5VT03 806 aaPredicted RBP29.18■■■□□ 2.26
TDG-210ENST00000545698 C14orf37Q86TY3 774 aa29.17■■■□□ 2.26
TDG-210ENST00000545698 DIP2AQ14689 1571 aa29.13■■■□□ 2.25
TDG-210ENST00000545698 ITGAEP38570 1179 aa29.13■■■□□ 2.25
TDG-210ENST00000545698 POTEAQ6S8J7 498 aa29.13■■■□□ 2.25
TDG-210ENST00000545698 NUP155O75694 1391 aa29.13■■■□□ 2.25
TDG-210ENST00000545698 ADAMTS13Q76LX8 1427 aa29.12■■■□□ 2.25
TDG-210ENST00000545698 NCOA3Q9Y6Q9 1424 aa29.11■■■□□ 2.25
TDG-210ENST00000545698 JCADQ9P266 1359 aa29.11■■■□□ 2.25
TDG-210ENST00000545698 PIK3R4Q99570 1358 aa29.08■■■□□ 2.25
TDG-210ENST00000545698 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.07■■■□□ 2.24
TDG-210ENST00000545698 COL16A1Q07092 1604 aaPredicted RBP29.06■■■□□ 2.24
TDG-210ENST00000545698 TRPM2O94759 1503 aa29.06■■■□□ 2.24
TDG-210ENST00000545698 ATF3P18847 181 aa29.05■■■□□ 2.24
TDG-210ENST00000545698 CADPS2Q86UW7 1296 aa29.05■■■□□ 2.24
TDG-210ENST00000545698 C19orf44Q9H6X5 657 aa29.04■■■□□ 2.24
TDG-210ENST00000545698 SPHKAPQ2M3C7 1700 aa29.01■■■□□ 2.23
TDG-210ENST00000545698 AMOTL2Q9Y2J4 779 aa29.01■■■□□ 2.23
TDG-210ENST00000545698 PPARGC1BQ86YN6 1023 aaKnown RBP29■■■□□ 2.23
TDG-210ENST00000545698 AHDC1Q5TGY3 1603 aaPredicted RBP28.98■■■□□ 2.23
TDG-210ENST00000545698 PTPRUQ92729 1446 aa28.97■■■□□ 2.23
TDG-210ENST00000545698 SPATA31A6Q5VVP1 1343 aa28.96■■■□□ 2.23
TDG-210ENST00000545698 ZNF326Q5BKZ1 582 aaKnown RBP28.96■■■□□ 2.23
TDG-210ENST00000545698 MEX3CQ5U5Q3 659 aaKnown RBP28.96■■■□□ 2.23
TDG-210ENST00000545698 SETD1AO15047 1707 aaKnown RBP28.95■■■□□ 2.23
TDG-210ENST00000545698 NRXN3Q9Y4C0 1643 aa28.94■■■□□ 2.22
TDG-210ENST00000545698 LRP6O75581 1613 aa28.93■■■□□ 2.22
TDG-210ENST00000545698 SHPRHQ149N8 1683 aa28.93■■■□□ 2.22
TDG-210ENST00000545698 SETBP1Q9Y6X0 1596 aa28.92■■■□□ 2.22
TDG-210ENST00000545698 XRN1Q8IZH2 1706 aaKnown RBP28.91■■■□□ 2.22
TDG-210ENST00000545698 DCCP43146 1447 aa28.89■■■□□ 2.22
TDG-210ENST00000545698 BRINP3Q76B58 766 aa28.89■■■□□ 2.22
TDG-210ENST00000545698 ZNF772Q68DY9 489 aaPredicted RBP28.86■■■□□ 2.21
TDG-210ENST00000545698 CLTCL1P53675 1640 aa28.85■■■□□ 2.21
TDG-210ENST00000545698 METP08581 1390 aa28.85■■■□□ 2.21
TDG-210ENST00000545698 ASXL1Q8IXJ9 1541 aa28.84■■■□□ 2.21
TDG-210ENST00000545698 KIF1BO60333 1816 aa28.83■■■□□ 2.21
TDG-210ENST00000545698 NUTM2BA6NNL0 878 aaPredicted RBP28.82■■■□□ 2.2
TDG-210ENST00000545698 NUTM2EB1AL46 878 aaPredicted RBP28.82■■■□□ 2.2
TDG-210ENST00000545698 NUTM2AQ8IVF1 878 aaPredicted RBP28.82■■■□□ 2.2
TDG-210ENST00000545698 NEXMIFQ5QGS0 1516 aa28.81■■■□□ 2.2
TDG-210ENST00000545698 MST1RQ04912 1400 aa28.81■■■□□ 2.2
TDG-210ENST00000545698 NHSL1Q5SYE7 1610 aa28.79■■■□□ 2.2
TDG-210ENST00000545698 TRIM52Q96A61 297 aa28.78■■■□□ 2.2
TDG-210ENST00000545698 ADGRL3Q9HAR2 1447 aa28.77■■■□□ 2.2
TDG-210ENST00000545698 NALCNQ8IZF0 1738 aa28.76■■■□□ 2.19
TDG-210ENST00000545698 SETD5Q9C0A6 1442 aa28.75■■■□□ 2.19
TDG-210ENST00000545698 NAIPQ13075 1403 aa28.74■■■□□ 2.19
TDG-210ENST00000545698 RRBP1Q9P2E9 1410 aaKnown RBP28.74■■■□□ 2.19
TDG-210ENST00000545698 LRRC59Q96AG4 307 aaKnown RBP28.73■■■□□ 2.19
TDG-210ENST00000545698 RXRBP28702 533 aa28.72■■■□□ 2.19
TDG-210ENST00000545698 DDX17Q92841 729 aaKnown RBP28.69■■■□□ 2.18
TDG-210ENST00000545698 AFF2P51816 1311 aa28.69■■■□□ 2.18
TDG-210ENST00000545698 VGFO15240 615 aaPredicted RBP28.68■■■□□ 2.18
TDG-210ENST00000545698 UPF1Q92900 1129 aaKnown RBP eCLIP28.65■■■□□ 2.18
TDG-210ENST00000545698 PTCH1Q13635 1447 aa28.64■■■□□ 2.18
TDG-210ENST00000545698 PNPLA6Q8IY17 1366 aa28.63■■■□□ 2.17
TDG-210ENST00000545698 C8orf37Q96NL8 207 aa28.63■■■□□ 2.17
TDG-210ENST00000545698 C1orf167Q5SNV9 1468 aa28.63■■■□□ 2.17
TDG-210ENST00000545698 CDK12Q9NYV4 1490 aaPredicted RBP28.62■■■□□ 2.17
TDG-210ENST00000545698 SLC4A1APQ9BWU0 796 aaKnown RBP28.62■■■□□ 2.17
TDG-210ENST00000545698 HFM1A2PYH4 1435 aa28.61■■■□□ 2.17
TDG-210ENST00000545698 ROBO2Q9HCK4 1378 aa28.61■■■□□ 2.17
TDG-210ENST00000545698 RPGRIP1LQ68CZ1 1315 aa28.6■■■□□ 2.17
TDG-210ENST00000545698 PPLO60437 1756 aa28.6■■■□□ 2.17
TDG-210ENST00000545698 LAMC1P11047 1609 aa28.56■■■□□ 2.16
TDG-210ENST00000545698 ADAMTS2O95450 1211 aa28.55■■■□□ 2.16
TDG-210ENST00000545698 ORAI2Q96SN7 254 aa28.55■■■□□ 2.16
TDG-210ENST00000545698 QTRT2Q9H974 415 aaKnown RBP28.55■■■□□ 2.16
TDG-210ENST00000545698 PRAG1Q86YV5 1406 aa28.53■■■□□ 2.16
TDG-210ENST00000545698 NGLY1Q96IV0 654 aa28.53■■■□□ 2.16
TDG-210ENST00000545698 RBM6P78332 1123 aaKnown RBP28.52■■■□□ 2.16
TDG-210ENST00000545698 SOS2Q07890 1332 aaPredicted RBP28.5■■■□□ 2.15
TDG-210ENST00000545698 RGS12O14924 1447 aa28.5■■■□□ 2.15
TDG-210ENST00000545698 FOXD1Q16676 465 aa28.48■■■□□ 2.15
TDG-210ENST00000545698 CDC42BPGQ6DT37 1551 aa28.45■■■□□ 2.14
TDG-210ENST00000545698 CCDC144AA2RUR9 1427 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms