RNA–Protein interactions for RNA: ENST00000545331.5

TULP3-208, Transcript of tubby like protein 3, humanhuman

TSL 2

Gene TULP3, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP3-208ENST00000545331 FOXD1Q16676 465 aa27.11■■□□□ 1.93
TULP3-208ENST00000545331 RIMS2Q9UQ26 1411 aa27.11■■□□□ 1.93
TULP3-208ENST00000545331 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.1■■□□□ 1.93
TULP3-208ENST00000545331 PLEKHG1Q9ULL1 1385 aa27.03■■□□□ 1.92
TULP3-208ENST00000545331 PPP1R15AO75807 674 aaPredicted RBP27.02■■□□□ 1.92
TULP3-208ENST00000545331 ZNF326Q5BKZ1 582 aaKnown RBP27.02■■□□□ 1.92
TULP3-208ENST00000545331 ANKRD30BQ9BXX2 1392 aa27.02■■□□□ 1.92
TULP3-208ENST00000545331 RPGRIP1LQ68CZ1 1315 aa27■■□□□ 1.91
TULP3-208ENST00000545331 NEXMIFQ5QGS0 1516 aa26.99■■□□□ 1.91
TULP3-208ENST00000545331 LTBP4Q8N2S1 1624 aa26.98■■□□□ 1.91
TULP3-208ENST00000545331 SPATA31E1Q6ZUB1 1445 aa26.97■■□□□ 1.91
TULP3-208ENST00000545331 ZNF335Q9H4Z2 1342 aaPredicted RBP26.96■■□□□ 1.91
TULP3-208ENST00000545331 DIP2AQ14689 1571 aa26.94■■□□□ 1.9
TULP3-208ENST00000545331 CPS1P31327 1500 aa26.93■■□□□ 1.9
TULP3-208ENST00000545331 SETBP1Q9Y6X0 1596 aa26.91■■□□□ 1.9
TULP3-208ENST00000545331 VGFO15240 615 aaPredicted RBP26.91■■□□□ 1.9
TULP3-208ENST00000545331 BCANQ96GW7 911 aa26.91■■□□□ 1.9
TULP3-208ENST00000545331 PPLO60437 1756 aa26.91■■□□□ 1.9
TULP3-208ENST00000545331 IQSEC2Q5JU85 1478 aa26.9■■□□□ 1.9
TULP3-208ENST00000545331 NUTM2DQ5VT03 806 aaPredicted RBP26.89■■□□□ 1.9
TULP3-208ENST00000545331 CERKQ8TCT0 537 aa26.89■■□□□ 1.9
TULP3-208ENST00000545331 TBX22Q9Y458 520 aa26.89■■□□□ 1.9
TULP3-208ENST00000545331 ADAMTS13Q76LX8 1427 aa26.88■■□□□ 1.89
TULP3-208ENST00000545331 SLC26A8Q96RN1 970 aa26.87■■□□□ 1.89
TULP3-208ENST00000545331 IFT172Q9UG01 1749 aa26.87■■□□□ 1.89
TULP3-208ENST00000545331 PIK3R4Q99570 1358 aa26.86■■□□□ 1.89
TULP3-208ENST00000545331 NRXN3Q9Y4C0 1643 aa26.85■■□□□ 1.89
TULP3-208ENST00000545331 RGL3Q3MIN7 710 aa26.84■■□□□ 1.89
TULP3-208ENST00000545331 NWD1Q149M9 1564 aa26.84■■□□□ 1.89
TULP3-208ENST00000545331 DHX57Q6P158 1386 aaKnown RBP26.84■■□□□ 1.89
TULP3-208ENST00000545331 STRCP1A6NGW2 1772 aa26.82■■□□□ 1.88
TULP3-208ENST00000545331 KCNA6P17658 529 aa26.82■■□□□ 1.88
TULP3-208ENST00000545331 NKTRP30414 1462 aaKnown RBP26.8■■□□□ 1.88
TULP3-208ENST00000545331 MYOM2P54296 1465 aa26.8■■□□□ 1.88
TULP3-208ENST00000545331 CHD2O14647 1828 aaKnown RBP26.79■■□□□ 1.88
TULP3-208ENST00000545331 STAC3Q96MF2 364 aa26.78■■□□□ 1.88
TULP3-208ENST00000545331 PCGF6Q9BYE7 350 aa26.77■■□□□ 1.88
TULP3-208ENST00000545331 LRRC7Q96NW7 1537 aa26.75■■□□□ 1.87
TULP3-208ENST00000545331 SENP3Q9H4L4 574 aaPredicted RBP26.75■■□□□ 1.87
TULP3-208ENST00000545331 NRXN1Q9ULB1 1477 aa26.74■■□□□ 1.87
TULP3-208ENST00000545331 ADGRF5Q8IZF2 1346 aa26.73■■□□□ 1.87
TULP3-208ENST00000545331 PIK3C2GO75747 1445 aa26.73■■□□□ 1.87
TULP3-208ENST00000545331 ALKQ9UM73 1620 aa26.73■■□□□ 1.87
TULP3-208ENST00000545331 SETD1AO15047 1707 aaKnown RBP26.72■■□□□ 1.87
TULP3-208ENST00000545331 FBXO41Q8TF61 875 aa26.7■■□□□ 1.86
TULP3-208ENST00000545331 METP08581 1390 aa26.69■■□□□ 1.86
TULP3-208ENST00000545331 XRN1Q8IZH2 1706 aaKnown RBP26.68■■□□□ 1.86
TULP3-208ENST00000545331 PTPRUQ92729 1446 aa26.67■■□□□ 1.86
TULP3-208ENST00000545331 LAMC1P11047 1609 aa26.67■■□□□ 1.86
TULP3-208ENST00000545331 NCOA3Q9Y6Q9 1424 aa26.67■■□□□ 1.86
TULP3-208ENST00000545331 AMOTL2Q9Y2J4 779 aa26.66■■□□□ 1.86
TULP3-208ENST00000545331 PROSER2Q86WR7 435 aaPredicted RBP26.65■■□□□ 1.86
TULP3-208ENST00000545331 DCAF11Q8TEB1 546 aa26.65■■□□□ 1.86
TULP3-208ENST00000545331 PRAG1Q86YV5 1406 aa26.65■■□□□ 1.86
TULP3-208ENST00000545331 XIRP1Q702N8 1843 aaKnown RBP26.64■■□□□ 1.85
TULP3-208ENST00000545331 TMEM94Q12767 1356 aa26.64■■□□□ 1.85
TULP3-208ENST00000545331 C14orf93Q9H972 538 aaKnown RBP26.61■■□□□ 1.85
TULP3-208ENST00000545331 PTCH1Q13635 1447 aa26.6■■□□□ 1.85
TULP3-208ENST00000545331 SIN3AQ96ST3 1273 aa26.59■■□□□ 1.85
TULP3-208ENST00000545331 TOM1O60784 492 aa26.58■■□□□ 1.84
TULP3-208ENST00000545331 KDM2AQ9Y2K7 1162 aa26.58■■□□□ 1.84
TULP3-208ENST00000545331 ASXL1Q8IXJ9 1541 aa26.56■■□□□ 1.84
TULP3-208ENST00000545331 UBAP1LF5GYI3 381 aa26.56■■□□□ 1.84
TULP3-208ENST00000545331 CLSPNQ9HAW4 1339 aa26.55■■□□□ 1.84
TULP3-208ENST00000545331 TECPR2O15040 1411 aa26.55■■□□□ 1.84
TULP3-208ENST00000545331 NEUROD1Q13562 356 aa26.55■■□□□ 1.84
TULP3-208ENST00000545331 LRPPRCP42704 1394 aaKnown RBP26.54■■□□□ 1.84
TULP3-208ENST00000545331 MSH6P52701 1360 aa26.54■■□□□ 1.84
TULP3-208ENST00000545331 KNDC1Q76NI1 1749 aa26.54■■□□□ 1.84
TULP3-208ENST00000545331 CFAP70Q5T0N1 1121 aa26.53■■□□□ 1.84
TULP3-208ENST00000545331 ABCC11Q96J66 1382 aa26.53■■□□□ 1.84
TULP3-208ENST00000545331 L3MBTL2Q969R5 705 aa26.52■■□□□ 1.84
TULP3-208ENST00000545331 YTHDC2Q9H6S0 1430 aaKnown RBP26.52■■□□□ 1.84
TULP3-208ENST00000545331 ILDR1Q86SU0 546 aaPredicted RBP26.51■■□□□ 1.83
TULP3-208ENST00000545331 KIAA1210Q9ULL0 1709 aa26.5■■□□□ 1.83
TULP3-208ENST00000545331 ADGRB1O14514 1584 aa26.49■■□□□ 1.83
TULP3-208ENST00000545331 DCCP43146 1447 aa26.48■■□□□ 1.83
TULP3-208ENST00000545331 TMEM132EQ6IEE7 984 aa26.48■■□□□ 1.83
TULP3-208ENST00000545331 RBM33Q96EV2 1170 aaKnown RBP26.48■■□□□ 1.83
TULP3-208ENST00000545331 C19orf44Q9H6X5 657 aa26.48■■□□□ 1.83
TULP3-208ENST00000545331 ROBO2Q9HCK4 1378 aa26.48■■□□□ 1.83
TULP3-208ENST00000545331 C14orf37Q86TY3 774 aa26.47■■□□□ 1.83
TULP3-208ENST00000545331 TONSLQ96HA7 1378 aa26.47■■□□□ 1.83
TULP3-208ENST00000545331 SIRT1Q96EB6 747 aa26.46■■□□□ 1.83
TULP3-208ENST00000545331 ADGRL3Q9HAR2 1447 aa26.46■■□□□ 1.83
TULP3-208ENST00000545331 FAM135BQ49AJ0 1406 aa26.45■■□□□ 1.82
TULP3-208ENST00000545331 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.44■■□□□ 1.82
TULP3-208ENST00000545331 DLC1Q96QB1 1528 aa26.44■■□□□ 1.82
TULP3-208ENST00000545331 CADPS2Q86UW7 1296 aa26.43■■□□□ 1.82
TULP3-208ENST00000545331 STK26Q9P289 416 aa26.42■■□□□ 1.82
TULP3-208ENST00000545331 NALCNQ8IZF0 1738 aa26.41■■□□□ 1.82
TULP3-208ENST00000545331 ATF3P18847 181 aa26.4■■□□□ 1.82
TULP3-208ENST00000545331 PIP4K2BP78356 416 aa26.36■■□□□ 1.81
TULP3-208ENST00000545331 SCAF1Q9H7N4 1312 aaKnown RBP26.36■■□□□ 1.81
TULP3-208ENST00000545331 TIMELESSQ9UNS1 1208 aa26.35■■□□□ 1.81
TULP3-208ENST00000545331 TRPM1Q7Z4N2 1603 aa26.35■■□□□ 1.81
TULP3-208ENST00000545331 CCER1Q8TC90 406 aaPredicted RBP26.34■■□□□ 1.81
TULP3-208ENST00000545331 SLAIN2Q9P270 581 aa26.34■■□□□ 1.81
TULP3-208ENST00000545331 CDC42BPGQ6DT37 1551 aa26.34■■□□□ 1.81
TULP3-208ENST00000545331 WAPLQ7Z5K2 1190 aa26.33■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms