RNA–Protein interactions for RNA: ENST00000545153.5

PTPN6-223, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 3

Gene PTPN6, Length 959 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-223ENST00000545153 POLR1AO95602 1720 aaPredicted RBP21.21■□□□□ 0.99
PTPN6-223ENST00000545153 TMEM131LA2VDJ0 1609 aa21.21■□□□□ 0.99
PTPN6-223ENST00000545153 KDM5AP29375 1690 aaKnown RBP21.21■□□□□ 0.99
PTPN6-223ENST00000545153 LTBP4Q8N2S1 1624 aa21.2■□□□□ 0.98
PTPN6-223ENST00000545153 ZFYVE9O95405 1425 aa21.2■□□□□ 0.98
PTPN6-223ENST00000545153 FBXO41Q8TF61 875 aa21.19■□□□□ 0.98
PTPN6-223ENST00000545153 TRPM2O94759 1503 aa21.19■□□□□ 0.98
PTPN6-223ENST00000545153 SPHKAPQ2M3C7 1700 aa21.17■□□□□ 0.98
PTPN6-223ENST00000545153 IQGAP1P46940 1657 aa21.16■□□□□ 0.98
PTPN6-223ENST00000545153 PLEKHG1Q9ULL1 1385 aa21.15■□□□□ 0.98
PTPN6-223ENST00000545153 CLTCL1P53675 1640 aa21.14■□□□□ 0.97
PTPN6-223ENST00000545153 TRIM26Q12899 539 aaPredicted RBP21.12■□□□□ 0.97
PTPN6-223ENST00000545153 RGL3Q3MIN7 710 aa21.12■□□□□ 0.97
PTPN6-223ENST00000545153 TBX22Q9Y458 520 aa21.12■□□□□ 0.97
PTPN6-223ENST00000545153 CCDC144AA2RUR9 1427 aa21.12■□□□□ 0.97
PTPN6-223ENST00000545153 KCNA6P17658 529 aa21.11■□□□□ 0.97
PTPN6-223ENST00000545153 RPGRIP1LQ68CZ1 1315 aa21.09■□□□□ 0.97
PTPN6-223ENST00000545153 MYO5BQ9ULV0 1848 aa21.09■□□□□ 0.97
PTPN6-223ENST00000545153 VGFO15240 615 aaPredicted RBP21.08■□□□□ 0.97
PTPN6-223ENST00000545153 CPS1P31327 1500 aa21.07■□□□□ 0.96
PTPN6-223ENST00000545153 UBAP1LF5GYI3 381 aa21.05■□□□□ 0.96
PTPN6-223ENST00000545153 ANKRD30BQ9BXX2 1392 aa21.05■□□□□ 0.96
PTPN6-223ENST00000545153 ADAMTS13Q76LX8 1427 aa21.04■□□□□ 0.96
PTPN6-223ENST00000545153 PROSER2Q86WR7 435 aaPredicted RBP21.04■□□□□ 0.96
PTPN6-223ENST00000545153 IQSEC2Q5JU85 1478 aa21.03■□□□□ 0.96
PTPN6-223ENST00000545153 RBM33Q96EV2 1170 aaKnown RBP21.03■□□□□ 0.96
PTPN6-223ENST00000545153 SPATA31E1Q6ZUB1 1445 aa21.02■□□□□ 0.96
PTPN6-223ENST00000545153 NEXMIFQ5QGS0 1516 aa21.01■□□□□ 0.95
PTPN6-223ENST00000545153 LRRC7Q96NW7 1537 aa21.01■□□□□ 0.95
PTPN6-223ENST00000545153 KIF1BO60333 1816 aa21■□□□□ 0.95
PTPN6-223ENST00000545153 AMOTL2Q9Y2J4 779 aa21■□□□□ 0.95
PTPN6-223ENST00000545153 ADGRF5Q8IZF2 1346 aa20.99■□□□□ 0.95
PTPN6-223ENST00000545153 TOM1O60784 492 aa20.98■□□□□ 0.95
PTPN6-223ENST00000545153 STRCP1A6NGW2 1772 aa20.97■□□□□ 0.95
PTPN6-223ENST00000545153 TMEM94Q12767 1356 aa20.97■□□□□ 0.95
PTPN6-223ENST00000545153 PIK3R4Q99570 1358 aa20.97■□□□□ 0.95
PTPN6-223ENST00000545153 METP08581 1390 aa20.96■□□□□ 0.95
PTPN6-223ENST00000545153 PIP4K2BP78356 416 aa20.94■□□□□ 0.94
PTPN6-223ENST00000545153 SCAF1Q9H7N4 1312 aaKnown RBP20.93■□□□□ 0.94
PTPN6-223ENST00000545153 PTPRUQ92729 1446 aa20.93■□□□□ 0.94
PTPN6-223ENST00000545153 SETBP1Q9Y6X0 1596 aa20.93■□□□□ 0.94
PTPN6-223ENST00000545153 DIP2AQ14689 1571 aa20.91■□□□□ 0.94
PTPN6-223ENST00000545153 KDM2AQ9Y2K7 1162 aa20.9■□□□□ 0.94
PTPN6-223ENST00000545153 NRXN3Q9Y4C0 1643 aa20.89■□□□□ 0.94
PTPN6-223ENST00000545153 C14orf37Q86TY3 774 aa20.89■□□□□ 0.93
PTPN6-223ENST00000545153 DCAF11Q8TEB1 546 aa20.89■□□□□ 0.93
PTPN6-223ENST00000545153 NKTRP30414 1462 aaKnown RBP20.88■□□□□ 0.93
PTPN6-223ENST00000545153 NWD1Q149M9 1564 aa20.88■□□□□ 0.93
PTPN6-223ENST00000545153 TMEM132EQ6IEE7 984 aa20.86■□□□□ 0.93
PTPN6-223ENST00000545153 ALKQ9UM73 1620 aa20.86■□□□□ 0.93
PTPN6-223ENST00000545153 CHD2O14647 1828 aaKnown RBP20.85■□□□□ 0.93
PTPN6-223ENST00000545153 CFAP70Q5T0N1 1121 aa20.85■□□□□ 0.93
PTPN6-223ENST00000545153 SIN3AQ96ST3 1273 aa20.85■□□□□ 0.93
PTPN6-223ENST00000545153 C14orf93Q9H972 538 aaKnown RBP20.85■□□□□ 0.93
PTPN6-223ENST00000545153 PPLO60437 1756 aa20.85■□□□□ 0.93
PTPN6-223ENST00000545153 STK26Q9P289 416 aa20.84■□□□□ 0.93
PTPN6-223ENST00000545153 MSH6P52701 1360 aa20.84■□□□□ 0.93
PTPN6-223ENST00000545153 DHX57Q6P158 1386 aaKnown RBP20.84■□□□□ 0.93
PTPN6-223ENST00000545153 PCGF6Q9BYE7 350 aa20.83■□□□□ 0.93
PTPN6-223ENST00000545153 C19orf44Q9H6X5 657 aa20.83■□□□□ 0.93
PTPN6-223ENST00000545153 NCOA3Q9Y6Q9 1424 aa20.82■□□□□ 0.92
PTPN6-223ENST00000545153 NEUROD1Q13562 356 aa20.82■□□□□ 0.92
PTPN6-223ENST00000545153 PIK3C2GO75747 1445 aa20.81■□□□□ 0.92
PTPN6-223ENST00000545153 STAC3Q96MF2 364 aa20.81■□□□□ 0.92
PTPN6-223ENST00000545153 SLAIN2Q9P270 581 aa20.8■□□□□ 0.92
PTPN6-223ENST00000545153 ATF3P18847 181 aa20.79■□□□□ 0.92
PTPN6-223ENST00000545153 HSPA1LP34931 641 aa20.79■□□□□ 0.92
PTPN6-223ENST00000545153 MYOM2P54296 1465 aa20.78■□□□□ 0.92
PTPN6-223ENST00000545153 ROBO2Q9HCK4 1378 aa20.78■□□□□ 0.92
PTPN6-223ENST00000545153 NRXN1Q9ULB1 1477 aa20.77■□□□□ 0.92
PTPN6-223ENST00000545153 XIRP1Q702N8 1843 aaKnown RBP20.77■□□□□ 0.92
PTPN6-223ENST00000545153 CADPS2Q86UW7 1296 aa20.77■□□□□ 0.92
PTPN6-223ENST00000545153 IFT172Q9UG01 1749 aa20.76■□□□□ 0.91
PTPN6-223ENST00000545153 LRPPRCP42704 1394 aaKnown RBP20.75■□□□□ 0.91
PTPN6-223ENST00000545153 WAPLQ7Z5K2 1190 aa20.75■□□□□ 0.91
PTPN6-223ENST00000545153 XRN1Q8IZH2 1706 aaKnown RBP20.74■□□□□ 0.91
PTPN6-223ENST00000545153 L3MBTL2Q969R5 705 aa20.74■□□□□ 0.91
PTPN6-223ENST00000545153 ABCC11Q96J66 1382 aa20.73■□□□□ 0.91
PTPN6-223ENST00000545153 SETD1AO15047 1707 aaKnown RBP20.73■□□□□ 0.91
PTPN6-223ENST00000545153 FAM135BQ49AJ0 1406 aa20.72■□□□□ 0.91
PTPN6-223ENST00000545153 PTCH1Q13635 1447 aa20.71■□□□□ 0.91
PTPN6-223ENST00000545153 YTHDC2Q9H6S0 1430 aaKnown RBP20.71■□□□□ 0.91
PTPN6-223ENST00000545153 SIRT1Q96EB6 747 aa20.7■□□□□ 0.9
PTPN6-223ENST00000545153 ASXL1Q8IXJ9 1541 aa20.68■□□□□ 0.9
PTPN6-223ENST00000545153 TRAK1Q9UPV9 953 aa20.68■□□□□ 0.9
PTPN6-223ENST00000545153 PRAG1Q86YV5 1406 aa20.68■□□□□ 0.9
PTPN6-223ENST00000545153 PLEKHH1Q9ULM0 1364 aa20.67■□□□□ 0.9
PTPN6-223ENST00000545153 ADGRL3Q9HAR2 1447 aa20.67■□□□□ 0.9
PTPN6-223ENST00000545153 PRAM1Q96QH2 718 aa20.66■□□□□ 0.9
PTPN6-223ENST00000545153 TECPR2O15040 1411 aa20.66■□□□□ 0.9
PTPN6-223ENST00000545153 POGKQ9P215 609 aa20.65■□□□□ 0.9
PTPN6-223ENST00000545153 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.64■□□□□ 0.9
PTPN6-223ENST00000545153 DCCP43146 1447 aa20.64■□□□□ 0.89
PTPN6-223ENST00000545153 SAFB2Q14151 953 aaKnown RBP eCLIP20.64■□□□□ 0.89
PTPN6-223ENST00000545153 NBPF1Q3BBV0 1214 aa20.64■□□□□ 0.89
PTPN6-223ENST00000545153 BRINP3Q76B58 766 aa20.63■□□□□ 0.89
PTPN6-223ENST00000545153 MST1RQ04912 1400 aa20.61■□□□□ 0.89
PTPN6-223ENST00000545153 ADGRB1O14514 1584 aa20.6■□□□□ 0.89
PTPN6-223ENST00000545153 LAMC1P11047 1609 aa20.6■□□□□ 0.89
PTPN6-223ENST00000545153 NUTM2FA1L443 756 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms