RNA–Protein interactions for RNA: ENST00000544755.1

PDCD2-212, Transcript of programmed cell death 2, humanhuman

TSL 2

Gene PDCD2, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-212ENST00000544755 RIMS2Q9UQ26 1411 aa22.58■■□□□ 1.21
PDCD2-212ENST00000544755 CPS1P31327 1500 aa22.58■■□□□ 1.21
PDCD2-212ENST00000544755 LTKP29376 864 aa22.58■■□□□ 1.21
PDCD2-212ENST00000544755 CERKQ8TCT0 537 aa22.56■■□□□ 1.2
PDCD2-212ENST00000544755 PPP1R15AO75807 674 aaPredicted RBP22.55■■□□□ 1.2
PDCD2-212ENST00000544755 CCDC144AA2RUR9 1427 aa22.55■■□□□ 1.2
PDCD2-212ENST00000544755 PLEKHG1Q9ULL1 1385 aa22.54■■□□□ 1.2
PDCD2-212ENST00000544755 ZNF335Q9H4Z2 1342 aaPredicted RBP22.53■■□□□ 1.2
PDCD2-212ENST00000544755 DIP2AQ14689 1571 aa22.52■■□□□ 1.2
PDCD2-212ENST00000544755 ZNF326Q5BKZ1 582 aaKnown RBP22.49■■□□□ 1.19
PDCD2-212ENST00000544755 RPGRIP1LQ68CZ1 1315 aa22.49■■□□□ 1.19
PDCD2-212ENST00000544755 FBXO41Q8TF61 875 aa22.48■■□□□ 1.19
PDCD2-212ENST00000544755 BCANQ96GW7 911 aa22.47■■□□□ 1.19
PDCD2-212ENST00000544755 NEXMIFQ5QGS0 1516 aa22.47■■□□□ 1.19
PDCD2-212ENST00000544755 TRIM26Q12899 539 aaPredicted RBP22.45■■□□□ 1.18
PDCD2-212ENST00000544755 FOXD1Q16676 465 aa22.44■■□□□ 1.18
PDCD2-212ENST00000544755 PIK3R4Q99570 1358 aa22.44■■□□□ 1.18
PDCD2-212ENST00000544755 SETBP1Q9Y6X0 1596 aa22.44■■□□□ 1.18
PDCD2-212ENST00000544755 VGFO15240 615 aaPredicted RBP22.43■■□□□ 1.18
PDCD2-212ENST00000544755 TBX22Q9Y458 520 aa22.43■■□□□ 1.18
PDCD2-212ENST00000544755 PPLO60437 1756 aa22.42■■□□□ 1.18
PDCD2-212ENST00000544755 NWD1Q149M9 1564 aa22.42■■□□□ 1.18
PDCD2-212ENST00000544755 NKTRP30414 1462 aaKnown RBP22.41■■□□□ 1.18
PDCD2-212ENST00000544755 SPATA31E1Q6ZUB1 1445 aa22.4■■□□□ 1.18
PDCD2-212ENST00000544755 STRCP1A6NGW2 1772 aa22.4■■□□□ 1.18
PDCD2-212ENST00000544755 SLC26A8Q96RN1 970 aa22.4■■□□□ 1.18
PDCD2-212ENST00000544755 CHD2O14647 1828 aaKnown RBP22.39■■□□□ 1.17
PDCD2-212ENST00000544755 KCNA6P17658 529 aa22.39■■□□□ 1.17
PDCD2-212ENST00000544755 ANKRD30BQ9BXX2 1392 aa22.38■■□□□ 1.17
PDCD2-212ENST00000544755 ADAMTS13Q76LX8 1427 aa22.38■■□□□ 1.17
PDCD2-212ENST00000544755 IFT172Q9UG01 1749 aa22.37■■□□□ 1.17
PDCD2-212ENST00000544755 NRXN3Q9Y4C0 1643 aa22.36■■□□□ 1.17
PDCD2-212ENST00000544755 LRRC7Q96NW7 1537 aa22.36■■□□□ 1.17
PDCD2-212ENST00000544755 NUTM2DQ5VT03 806 aaPredicted RBP22.34■■□□□ 1.17
PDCD2-212ENST00000544755 ILDR1Q86SU0 546 aaPredicted RBP22.32■■□□□ 1.16
PDCD2-212ENST00000544755 STAC3Q96MF2 364 aa22.3■■□□□ 1.16
PDCD2-212ENST00000544755 NCOA3Q9Y6Q9 1424 aa22.3■■□□□ 1.16
PDCD2-212ENST00000544755 TOM1O60784 492 aa22.29■■□□□ 1.16
PDCD2-212ENST00000544755 RGL3Q3MIN7 710 aa22.29■■□□□ 1.16
PDCD2-212ENST00000544755 MYOM2P54296 1465 aa22.28■■□□□ 1.16
PDCD2-212ENST00000544755 XIRP1Q702N8 1843 aaKnown RBP22.27■■□□□ 1.16
PDCD2-212ENST00000544755 PROSER2Q86WR7 435 aaPredicted RBP22.27■■□□□ 1.16
PDCD2-212ENST00000544755 XRN1Q8IZH2 1706 aaKnown RBP22.26■■□□□ 1.15
PDCD2-212ENST00000544755 UBAP1LF5GYI3 381 aa22.26■■□□□ 1.15
PDCD2-212ENST00000544755 LAMC1P11047 1609 aa22.26■■□□□ 1.15
PDCD2-212ENST00000544755 ALKQ9UM73 1620 aa22.26■■□□□ 1.15
PDCD2-212ENST00000544755 SETD1AO15047 1707 aaKnown RBP22.26■■□□□ 1.15
PDCD2-212ENST00000544755 TMEM94Q12767 1356 aa22.25■■□□□ 1.15
PDCD2-212ENST00000544755 PIK3C2GO75747 1445 aa22.23■■□□□ 1.15
PDCD2-212ENST00000544755 PRAG1Q86YV5 1406 aa22.23■■□□□ 1.15
PDCD2-212ENST00000544755 SENP3Q9H4L4 574 aaPredicted RBP22.22■■□□□ 1.15
PDCD2-212ENST00000544755 NRXN1Q9ULB1 1477 aa22.22■■□□□ 1.15
PDCD2-212ENST00000544755 AMOTL2Q9Y2J4 779 aa22.21■■□□□ 1.15
PDCD2-212ENST00000544755 MSH6P52701 1360 aa22.21■■□□□ 1.15
PDCD2-212ENST00000544755 METP08581 1390 aa22.2■■□□□ 1.14
PDCD2-212ENST00000544755 ADGRF5Q8IZF2 1346 aa22.19■■□□□ 1.14
PDCD2-212ENST00000544755 PTPRUQ92729 1446 aa22.19■■□□□ 1.14
PDCD2-212ENST00000544755 PTCH1Q13635 1447 aa22.18■■□□□ 1.14
PDCD2-212ENST00000544755 DHX57Q6P158 1386 aaKnown RBP22.14■■□□□ 1.14
PDCD2-212ENST00000544755 KNDC1Q76NI1 1749 aa22.14■■□□□ 1.13
PDCD2-212ENST00000544755 DCCP43146 1447 aa22.14■■□□□ 1.13
PDCD2-212ENST00000544755 C14orf37Q86TY3 774 aa22.13■■□□□ 1.13
PDCD2-212ENST00000544755 DCAF11Q8TEB1 546 aa22.12■■□□□ 1.13
PDCD2-212ENST00000544755 C19orf44Q9H6X5 657 aa22.12■■□□□ 1.13
PDCD2-212ENST00000544755 C14orf93Q9H972 538 aaKnown RBP22.12■■□□□ 1.13
PDCD2-212ENST00000544755 TECPR2O15040 1411 aa22.11■■□□□ 1.13
PDCD2-212ENST00000544755 CADPS2Q86UW7 1296 aa22.1■■□□□ 1.13
PDCD2-212ENST00000544755 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.1■■□□□ 1.13
PDCD2-212ENST00000544755 LRPPRCP42704 1394 aaKnown RBP22.1■■□□□ 1.13
PDCD2-212ENST00000544755 ABCC11Q96J66 1382 aa22.09■■□□□ 1.13
PDCD2-212ENST00000544755 SCAF1Q9H7N4 1312 aaKnown RBP22.08■■□□□ 1.13
PDCD2-212ENST00000544755 ADGRL3Q9HAR2 1447 aa22.08■■□□□ 1.13
PDCD2-212ENST00000544755 KIAA1210Q9ULL0 1709 aa22.07■■□□□ 1.12
PDCD2-212ENST00000544755 ATF3P18847 181 aa22.07■■□□□ 1.12
PDCD2-212ENST00000544755 PIP4K2BP78356 416 aa22.07■■□□□ 1.12
PDCD2-212ENST00000544755 FAM135BQ49AJ0 1406 aa22.06■■□□□ 1.12
PDCD2-212ENST00000544755 YTHDC2Q9H6S0 1430 aaKnown RBP22.06■■□□□ 1.12
PDCD2-212ENST00000544755 ASXL1Q8IXJ9 1541 aa22.06■■□□□ 1.12
PDCD2-212ENST00000544755 SIRT1Q96EB6 747 aa22.05■■□□□ 1.12
PDCD2-212ENST00000544755 KDM2AQ9Y2K7 1162 aa22.05■■□□□ 1.12
PDCD2-212ENST00000544755 NALCNQ8IZF0 1738 aa22.04■■□□□ 1.12
PDCD2-212ENST00000544755 RBM33Q96EV2 1170 aaKnown RBP22.04■■□□□ 1.12
PDCD2-212ENST00000544755 ROBO2Q9HCK4 1378 aa22.03■■□□□ 1.12
PDCD2-212ENST00000544755 CFAP70Q5T0N1 1121 aa22.02■■□□□ 1.12
PDCD2-212ENST00000544755 SLAIN2Q9P270 581 aa22.02■■□□□ 1.12
PDCD2-212ENST00000544755 DLC1Q96QB1 1528 aa22.01■■□□□ 1.11
PDCD2-212ENST00000544755 ROBO1Q9Y6N7 1651 aa22.01■■□□□ 1.11
PDCD2-212ENST00000544755 ADGRB1O14514 1584 aa22■■□□□ 1.11
PDCD2-212ENST00000544755 TMEM132EQ6IEE7 984 aa21.99■■□□□ 1.11
PDCD2-212ENST00000544755 CDC42BPGQ6DT37 1551 aa21.99■■□□□ 1.11
PDCD2-212ENST00000544755 PCGF6Q9BYE7 350 aa21.98■■□□□ 1.11
PDCD2-212ENST00000544755 STK26Q9P289 416 aa21.98■■□□□ 1.11
PDCD2-212ENST00000544755 CLSPNQ9HAW4 1339 aa21.97■■□□□ 1.11
PDCD2-212ENST00000544755 SIN3AQ96ST3 1273 aa21.96■■□□□ 1.11
PDCD2-212ENST00000544755 NEUROD1Q13562 356 aa21.95■■□□□ 1.1
PDCD2-212ENST00000544755 L3MBTL2Q969R5 705 aa21.95■■□□□ 1.1
PDCD2-212ENST00000544755 MST1RQ04912 1400 aa21.94■■□□□ 1.1
PDCD2-212ENST00000544755 HSPA1LP34931 641 aa21.93■■□□□ 1.1
PDCD2-212ENST00000544755 TONSLQ96HA7 1378 aa21.93■■□□□ 1.1
PDCD2-212ENST00000544755 POGKQ9P215 609 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms