RNA–Protein interactions for RNA: ENST00000544454.5

LTBR-213, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-213ENST00000544454 CCDC144AA2RUR9 1427 aa20.16■□□□□ 0.82
LTBR-213ENST00000544454 CLTCL1P53675 1640 aa20.15■□□□□ 0.82
LTBR-213ENST00000544454 ANKRD30BQ9BXX2 1392 aa20.12■□□□□ 0.81
LTBR-213ENST00000544454 PLEKHG1Q9ULL1 1385 aa20.12■□□□□ 0.81
LTBR-213ENST00000544454 RPGRIP1LQ68CZ1 1315 aa20.12■□□□□ 0.81
LTBR-213ENST00000544454 ZNF335Q9H4Z2 1342 aaPredicted RBP20.12■□□□□ 0.81
LTBR-213ENST00000544454 BCANQ96GW7 911 aa20.12■□□□□ 0.81
LTBR-213ENST00000544454 NUTM2DQ5VT03 806 aaPredicted RBP20.11■□□□□ 0.81
LTBR-213ENST00000544454 IQGAP1P46940 1657 aa20.1■□□□□ 0.81
LTBR-213ENST00000544454 CERKQ8TCT0 537 aa20.1■□□□□ 0.81
LTBR-213ENST00000544454 SLC26A8Q96RN1 970 aa20.09■□□□□ 0.81
LTBR-213ENST00000544454 VGFO15240 615 aaPredicted RBP20.08■□□□□ 0.81
LTBR-213ENST00000544454 TBX22Q9Y458 520 aa20.08■□□□□ 0.81
LTBR-213ENST00000544454 MYO5BQ9ULV0 1848 aa20.08■□□□□ 0.8
LTBR-213ENST00000544454 SPATA31E1Q6ZUB1 1445 aa20.07■□□□□ 0.8
LTBR-213ENST00000544454 LTBP4Q8N2S1 1624 aa20.06■□□□□ 0.8
LTBR-213ENST00000544454 RGL3Q3MIN7 710 aa20.06■□□□□ 0.8
LTBR-213ENST00000544454 KIF1BO60333 1816 aa20.05■□□□□ 0.8
LTBR-213ENST00000544454 SENP3Q9H4L4 574 aaPredicted RBP20.03■□□□□ 0.8
LTBR-213ENST00000544454 NEXMIFQ5QGS0 1516 aa20.02■□□□□ 0.8
LTBR-213ENST00000544454 KCNA6P17658 529 aa20.02■□□□□ 0.8
LTBR-213ENST00000544454 ADAMTS13Q76LX8 1427 aa20.01■□□□□ 0.79
LTBR-213ENST00000544454 CPS1P31327 1500 aa20■□□□□ 0.79
LTBR-213ENST00000544454 PCGF6Q9BYE7 350 aa19.99■□□□□ 0.79
LTBR-213ENST00000544454 PIK3R4Q99570 1358 aa19.98■□□□□ 0.79
LTBR-213ENST00000544454 IQSEC2Q5JU85 1478 aa19.97■□□□□ 0.79
LTBR-213ENST00000544454 SETBP1Q9Y6X0 1596 aa19.96■□□□□ 0.79
LTBR-213ENST00000544454 DHX57Q6P158 1386 aaKnown RBP19.95■□□□□ 0.79
LTBR-213ENST00000544454 FBXO41Q8TF61 875 aa19.95■□□□□ 0.78
LTBR-213ENST00000544454 STAC3Q96MF2 364 aa19.95■□□□□ 0.78
LTBR-213ENST00000544454 ADGRF5Q8IZF2 1346 aa19.95■□□□□ 0.78
LTBR-213ENST00000544454 DIP2AQ14689 1571 aa19.95■□□□□ 0.78
LTBR-213ENST00000544454 PROSER2Q86WR7 435 aaPredicted RBP19.92■□□□□ 0.78
LTBR-213ENST00000544454 LRRC7Q96NW7 1537 aa19.92■□□□□ 0.78
LTBR-213ENST00000544454 AMOTL2Q9Y2J4 779 aa19.91■□□□□ 0.78
LTBR-213ENST00000544454 METP08581 1390 aa19.91■□□□□ 0.78
LTBR-213ENST00000544454 PPLO60437 1756 aa19.9■□□□□ 0.78
LTBR-213ENST00000544454 DCAF11Q8TEB1 546 aa19.9■□□□□ 0.78
LTBR-213ENST00000544454 NRXN3Q9Y4C0 1643 aa19.9■□□□□ 0.78
LTBR-213ENST00000544454 STRCP1A6NGW2 1772 aa19.88■□□□□ 0.77
LTBR-213ENST00000544454 NKTRP30414 1462 aaKnown RBP19.88■□□□□ 0.77
LTBR-213ENST00000544454 NWD1Q149M9 1564 aa19.87■□□□□ 0.77
LTBR-213ENST00000544454 MYOM2P54296 1465 aa19.87■□□□□ 0.77
LTBR-213ENST00000544454 PTPRUQ92729 1446 aa19.87■□□□□ 0.77
LTBR-213ENST00000544454 SIN3AQ96ST3 1273 aa19.87■□□□□ 0.77
LTBR-213ENST00000544454 C14orf93Q9H972 538 aaKnown RBP19.87■□□□□ 0.77
LTBR-213ENST00000544454 KDM2AQ9Y2K7 1162 aa19.87■□□□□ 0.77
LTBR-213ENST00000544454 PIK3C2GO75747 1445 aa19.86■□□□□ 0.77
LTBR-213ENST00000544454 TMEM94Q12767 1356 aa19.86■□□□□ 0.77
LTBR-213ENST00000544454 ILDR1Q86SU0 546 aaPredicted RBP19.86■□□□□ 0.77
LTBR-213ENST00000544454 ALKQ9UM73 1620 aa19.86■□□□□ 0.77
LTBR-213ENST00000544454 NRXN1Q9ULB1 1477 aa19.86■□□□□ 0.77
LTBR-213ENST00000544454 UBAP1LF5GYI3 381 aa19.85■□□□□ 0.77
LTBR-213ENST00000544454 CHD2O14647 1828 aaKnown RBP19.85■□□□□ 0.77
LTBR-213ENST00000544454 IFT172Q9UG01 1749 aa19.85■□□□□ 0.77
LTBR-213ENST00000544454 TOM1O60784 492 aa19.84■□□□□ 0.77
LTBR-213ENST00000544454 NEUROD1Q13562 356 aa19.84■□□□□ 0.77
LTBR-213ENST00000544454 NCOA3Q9Y6Q9 1424 aa19.84■□□□□ 0.77
LTBR-213ENST00000544454 RBM33Q96EV2 1170 aaKnown RBP19.83■□□□□ 0.77
LTBR-213ENST00000544454 CFAP70Q5T0N1 1121 aa19.82■□□□□ 0.76
LTBR-213ENST00000544454 TMEM132EQ6IEE7 984 aa19.8■□□□□ 0.76
LTBR-213ENST00000544454 L3MBTL2Q969R5 705 aa19.8■□□□□ 0.76
LTBR-213ENST00000544454 C19orf44Q9H6X5 657 aa19.78■□□□□ 0.76
LTBR-213ENST00000544454 PRAG1Q86YV5 1406 aa19.77■□□□□ 0.76
LTBR-213ENST00000544454 C14orf37Q86TY3 774 aa19.77■□□□□ 0.76
LTBR-213ENST00000544454 LRPPRCP42704 1394 aaKnown RBP19.77■□□□□ 0.76
LTBR-213ENST00000544454 MSH6P52701 1360 aa19.77■□□□□ 0.76
LTBR-213ENST00000544454 ABCC11Q96J66 1382 aa19.77■□□□□ 0.76
LTBR-213ENST00000544454 SETD1AO15047 1707 aaKnown RBP19.76■□□□□ 0.75
LTBR-213ENST00000544454 STK26Q9P289 416 aa19.76■□□□□ 0.75
LTBR-213ENST00000544454 XRN1Q8IZH2 1706 aaKnown RBP19.76■□□□□ 0.75
LTBR-213ENST00000544454 SIRT1Q96EB6 747 aa19.75■□□□□ 0.75
LTBR-213ENST00000544454 PTCH1Q13635 1447 aa19.75■□□□□ 0.75
LTBR-213ENST00000544454 ROBO2Q9HCK4 1378 aa19.74■□□□□ 0.75
LTBR-213ENST00000544454 CLSPNQ9HAW4 1339 aa19.74■□□□□ 0.75
LTBR-213ENST00000544454 PIP4K2BP78356 416 aa19.73■□□□□ 0.75
LTBR-213ENST00000544454 YTHDC2Q9H6S0 1430 aaKnown RBP19.73■□□□□ 0.75
LTBR-213ENST00000544454 TECPR2O15040 1411 aa19.72■□□□□ 0.75
LTBR-213ENST00000544454 CADPS2Q86UW7 1296 aa19.72■□□□□ 0.75
LTBR-213ENST00000544454 XIRP1Q702N8 1843 aaKnown RBP19.72■□□□□ 0.75
LTBR-213ENST00000544454 ATF3P18847 181 aa19.71■□□□□ 0.75
LTBR-213ENST00000544454 LAMC1P11047 1609 aa19.71■□□□□ 0.75
LTBR-213ENST00000544454 ASXL1Q8IXJ9 1541 aa19.71■□□□□ 0.75
LTBR-213ENST00000544454 SLAIN2Q9P270 581 aa19.7■□□□□ 0.74
LTBR-213ENST00000544454 SCAF1Q9H7N4 1312 aaKnown RBP19.7■□□□□ 0.74
LTBR-213ENST00000544454 TONSLQ96HA7 1378 aa19.69■□□□□ 0.74
LTBR-213ENST00000544454 WAPLQ7Z5K2 1190 aa19.68■□□□□ 0.74
LTBR-213ENST00000544454 FAM135BQ49AJ0 1406 aa19.68■□□□□ 0.74
LTBR-213ENST00000544454 ADGRB1O14514 1584 aa19.67■□□□□ 0.74
LTBR-213ENST00000544454 DCCP43146 1447 aa19.67■□□□□ 0.74
LTBR-213ENST00000544454 ADGRL3Q9HAR2 1447 aa19.67■□□□□ 0.74
LTBR-213ENST00000544454 CCER1Q8TC90 406 aaPredicted RBP19.66■□□□□ 0.74
LTBR-213ENST00000544454 TRAK1Q9UPV9 953 aa19.65■□□□□ 0.74
LTBR-213ENST00000544454 NBPF1Q3BBV0 1214 aa19.64■□□□□ 0.73
LTBR-213ENST00000544454 PRAM1Q96QH2 718 aa19.64■□□□□ 0.73
LTBR-213ENST00000544454 POGKQ9P215 609 aa19.63■□□□□ 0.73
LTBR-213ENST00000544454 TIMELESSQ9UNS1 1208 aa19.63■□□□□ 0.73
LTBR-213ENST00000544454 PLEKHH1Q9ULM0 1364 aa19.62■□□□□ 0.73
LTBR-213ENST00000544454 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.62■□□□□ 0.73
LTBR-213ENST00000544454 DLC1Q96QB1 1528 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 341.4 ms