RNA–Protein interactions for RNA: ENST00000544396.5

GRAMD2B-219, Transcript of GRAM domain containing 2B, humanhuman

TSL 2 BASIC

Gene GRAMD2B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2B-219ENST00000544396 PLEKHG5O94827 1062 aa24.45■■□□□ 1.51
GRAMD2B-219ENST00000544396 POGKQ9P215 609 aa24.44■■□□□ 1.5
GRAMD2B-219ENST00000544396 APAF1O14727 1248 aa24.43■■□□□ 1.5
GRAMD2B-219ENST00000544396 DMRT2Q9Y5R5 561 aa24.43■■□□□ 1.5
GRAMD2B-219ENST00000544396 ERCC6Q03468 1493 aa24.42■■□□□ 1.5
GRAMD2B-219ENST00000544396 CARMIL2Q6F5E8 1435 aa24.42■■□□□ 1.5
GRAMD2B-219ENST00000544396 WDR7Q9Y4E6 1490 aa24.41■■□□□ 1.5
GRAMD2B-219ENST00000544396 TRMT2AQ8IZ69 625 aaKnown RBP24.4■■□□□ 1.5
GRAMD2B-219ENST00000544396 SLKQ9H2G2 1235 aaPredicted RBP24.4■■□□□ 1.5
GRAMD2B-219ENST00000544396 RRAGDQ9NQL2 400 aaPredicted RBP24.39■■□□□ 1.5
GRAMD2B-219ENST00000544396 CCDC141Q6ZP82 1450 aa24.38■■□□□ 1.49
GRAMD2B-219ENST00000544396 ABCA8O94911 1581 aa24.37■■□□□ 1.49
GRAMD2B-219ENST00000544396 PODXL2Q9NZ53 605 aa24.35■■□□□ 1.49
GRAMD2B-219ENST00000544396 PANK1Q8TE04 598 aa24.35■■□□□ 1.49
GRAMD2B-219ENST00000544396 EIF3AQ14152 1382 aaKnown RBP24.35■■□□□ 1.49
GRAMD2B-219ENST00000544396 ARHGEF5Q12774 1597 aa24.34■■□□□ 1.49
GRAMD2B-219ENST00000544396 COG6Q9Y2V7 657 aa24.34■■□□□ 1.49
GRAMD2B-219ENST00000544396 SAMD9LQ8IVG5 1584 aa24.33■■□□□ 1.48
GRAMD2B-219ENST00000544396 LAMC1P11047 1609 aa24.31■■□□□ 1.48
GRAMD2B-219ENST00000544396 SYNJ2O15056 1496 aa24.31■■□□□ 1.48
GRAMD2B-219ENST00000544396 NKTRP30414 1462 aaKnown RBP24.31■■□□□ 1.48
GRAMD2B-219ENST00000544396 ARXQ96QS3 562 aa24.3■■□□□ 1.48
GRAMD2B-219ENST00000544396 E9PSI1 815 aa24.28■■□□□ 1.48
GRAMD2B-219ENST00000544396 NAP1L5Q96NT1 182 aaPredicted RBP24.28■■□□□ 1.48
GRAMD2B-219ENST00000544396 CLUAP1Q96AJ1 413 aa24.27■■□□□ 1.48
GRAMD2B-219ENST00000544396 MYO5CQ9NQX4 1742 aa24.27■■□□□ 1.48
GRAMD2B-219ENST00000544396 CANXP27824 592 aaKnown RBP24.27■■□□□ 1.48
GRAMD2B-219ENST00000544396 HSP90AA2PQ14568 343 aaPredicted RBP24.27■■□□□ 1.48
GRAMD2B-219ENST00000544396 RSPH4AQ5TD94 716 aa24.27■■□□□ 1.48
GRAMD2B-219ENST00000544396 NUP160Q12769 1436 aa24.26■■□□□ 1.47
GRAMD2B-219ENST00000544396 SYCP2Q9BX26 1530 aa24.26■■□□□ 1.47
GRAMD2B-219ENST00000544396 EIF2AK4Q9P2K8 1649 aaKnown RBP24.25■■□□□ 1.47
GRAMD2B-219ENST00000544396 PIK3C2GO75747 1445 aa24.24■■□□□ 1.47
GRAMD2B-219ENST00000544396 TNNQ9UQP3 1299 aa24.24■■□□□ 1.47
GRAMD2B-219ENST00000544396 BECN1Q14457 450 aa24.24■■□□□ 1.47
GRAMD2B-219ENST00000544396 ASXL1Q8IXJ9 1541 aa24.23■■□□□ 1.47
GRAMD2B-219ENST00000544396 CGNL1Q0VF96 1302 aa24.23■■□□□ 1.47
GRAMD2B-219ENST00000544396 SPRYD3Q8NCJ5 442 aa24.23■■□□□ 1.47
GRAMD2B-219ENST00000544396 CENPJQ9HC77 1338 aaPredicted RBP24.23■■□□□ 1.47
GRAMD2B-219ENST00000544396 NEUROD2Q15784 382 aa24.22■■□□□ 1.47
GRAMD2B-219ENST00000544396 ANTXR1Q9H6X2 564 aa24.22■■□□□ 1.47
GRAMD2B-219ENST00000544396 CLASP1Q7Z460 1538 aa24.22■■□□□ 1.47
GRAMD2B-219ENST00000544396 PDE3AQ14432 1141 aa24.21■■□□□ 1.47
GRAMD2B-219ENST00000544396 CDC42BPBQ9Y5S2 1711 aa24.21■■□□□ 1.47
GRAMD2B-219ENST00000544396 UNC13BO14795 1591 aa24.21■■□□□ 1.47
GRAMD2B-219ENST00000544396 MAPK8IP3Q9UPT6 1336 aa24.21■■□□□ 1.47
GRAMD2B-219ENST00000544396 CDCA8Q53HL2 280 aa24.2■■□□□ 1.46
GRAMD2B-219ENST00000544396 NLRP1Q9C000 1473 aa24.19■■□□□ 1.46
GRAMD2B-219ENST00000544396 RRP7AQ9Y3A4 280 aaKnown RBP24.19■■□□□ 1.46
GRAMD2B-219ENST00000544396 PCDHB15Q9Y5E8 787 aa24.19■■□□□ 1.46
GRAMD2B-219ENST00000544396 WWC1Q8IX03 1113 aa24.18■■□□□ 1.46
GRAMD2B-219ENST00000544396 BCL2L13Q9BXK5 485 aa24.18■■□□□ 1.46
GRAMD2B-219ENST00000544396 TBC1D2Q9BYX2 928 aa24.18■■□□□ 1.46
GRAMD2B-219ENST00000544396 RLBP1P12271 317 aa24.17■■□□□ 1.46
GRAMD2B-219ENST00000544396 CARD14Q9BXL6 1004 aa24.17■■□□□ 1.46
GRAMD2B-219ENST00000544396 HSP90AA1P07900 732 aaKnown RBP24.17■■□□□ 1.46
GRAMD2B-219ENST00000544396 RNF17Q9BXT8 1623 aaKnown RBP24.16■■□□□ 1.46
GRAMD2B-219ENST00000544396 ARHGAP5Q13017 1502 aa24.15■■□□□ 1.46
GRAMD2B-219ENST00000544396 IQGAP3Q86VI3 1631 aa24.15■■□□□ 1.46
GRAMD2B-219ENST00000544396 GZF1Q9H116 711 aaPredicted RBP24.15■■□□□ 1.46
GRAMD2B-219ENST00000544396 ABCC2Q92887 1545 aa24.14■■□□□ 1.46
GRAMD2B-219ENST00000544396 ATP10AO60312 1499 aa24.14■■□□□ 1.45
GRAMD2B-219ENST00000544396 RRP9O43818 475 aaKnown RBP24.14■■□□□ 1.45
GRAMD2B-219ENST00000544396 PDZRN3Q9UPQ7 1066 aa24.14■■□□□ 1.45
GRAMD2B-219ENST00000544396 PREX2Q70Z35 1606 aa24.13■■□□□ 1.45
GRAMD2B-219ENST00000544396 TBC1D32Q96NH3 1257 aa24.13■■□□□ 1.45
GRAMD2B-219ENST00000544396 SCAF11Q99590 1463 aaKnown RBP24.13■■□□□ 1.45
GRAMD2B-219ENST00000544396 SYNMO15061 1565 aa24.13■■□□□ 1.45
GRAMD2B-219ENST00000544396 TNNT2P45379 298 aaPredicted RBP24.12■■□□□ 1.45
GRAMD2B-219ENST00000544396 PNNQ9H307 717 aaKnown RBP24.12■■□□□ 1.45
GRAMD2B-219ENST00000544396 NPC1L1Q9UHC9 1359 aa24.11■■□□□ 1.45
GRAMD2B-219ENST00000544396 XRCC6P12956 609 aaKnown RBP eCLIP24.11■■□□□ 1.45
GRAMD2B-219ENST00000544396 RARSP54136 660 aaKnown RBP24.11■■□□□ 1.45
GRAMD2B-219ENST00000544396 L1TD1Q5T7N2 865 aaKnown RBP24.11■■□□□ 1.45
GRAMD2B-219ENST00000544396 PANK2Q9BZ23 570 aa24.1■■□□□ 1.45
GRAMD2B-219ENST00000544396 UPF2Q9HAU5 1272 aaKnown RBP24.1■■□□□ 1.45
GRAMD2B-219ENST00000544396 MADDQ8WXG6 1647 aa24.09■■□□□ 1.45
GRAMD2B-219ENST00000544396 IQGAP1P46940 1657 aa24.08■■□□□ 1.45
GRAMD2B-219ENST00000544396 VIRMAQ69YN4 1812 aaKnown RBP24.08■■□□□ 1.44
GRAMD2B-219ENST00000544396 TTC37Q6PGP7 1564 aa24.07■■□□□ 1.44
GRAMD2B-219ENST00000544396 CFAP70Q5T0N1 1121 aa24.06■■□□□ 1.44
GRAMD2B-219ENST00000544396 PMFBP1Q8TBY8 1022 aa24.06■■□□□ 1.44
GRAMD2B-219ENST00000544396 MYOM1P52179 1685 aa24.06■■□□□ 1.44
GRAMD2B-219ENST00000544396 MAST1Q9Y2H9 1570 aa24.05■■□□□ 1.44
GRAMD2B-219ENST00000544396 MCM4P33991 863 aa24.04■■□□□ 1.44
GRAMD2B-219ENST00000544396 GOLGA6L3A6NEY3 463 aa24.03■■□□□ 1.44
GRAMD2B-219ENST00000544396 DUOX2Q9NRD8 1548 aa24.03■■□□□ 1.44
GRAMD2B-219ENST00000544396 TCP11L2Q8N4U5 519 aa24.03■■□□□ 1.44
GRAMD2B-219ENST00000544396 NINLQ9Y2I6 1382 aa24.02■■□□□ 1.44
GRAMD2B-219ENST00000544396 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.01■■□□□ 1.43
GRAMD2B-219ENST00000544396 SCAPERQ9BY12 1400 aa24■■□□□ 1.43
GRAMD2B-219ENST00000544396 FSD2A1L4K1 749 aa24■■□□□ 1.43
GRAMD2B-219ENST00000544396 NGEFQ8N5V2 710 aa24■■□□□ 1.43
GRAMD2B-219ENST00000544396 PLXNC1O60486 1568 aa23.99■■□□□ 1.43
GRAMD2B-219ENST00000544396 MFAP1P55081 439 aaKnown RBP23.99■■□□□ 1.43
GRAMD2B-219ENST00000544396 RWDD1Q9H446 243 aaPredicted RBP23.98■■□□□ 1.43
GRAMD2B-219ENST00000544396 ERVK-7P63135 1459 aa23.98■■□□□ 1.43
GRAMD2B-219ENST00000544396 CLCN1P35523 988 aa23.97■■□□□ 1.43
GRAMD2B-219ENST00000544396 RUNDC1Q96C34 613 aa23.97■■□□□ 1.43
GRAMD2B-219ENST00000544396 MORC1Q86VD1 984 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms